RNA–Protein interactions for RNA: ENST00000511642.5

CCND3-215, Transcript of cyclin D3, humanhuman

TSL 2 BASIC

Gene CCND3, Length 2,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-215ENST00000511642 ALDH1L1O75891 902 aa16.62■□□□□ 0.25
CCND3-215ENST00000511642 MAP3K2Q9Y2U5 619 aa16.62■□□□□ 0.25
CCND3-215ENST00000511642 SLIT3O75094 1523 aa16.61■□□□□ 0.25
CCND3-215ENST00000511642 PRAMEF22A3QJZ6 481 aa16.6■□□□□ 0.25
CCND3-215ENST00000511642 PSME1Q06323 249 aa16.6■□□□□ 0.25
CCND3-215ENST00000511642 AMOTQ4VCS5 1084 aa16.6■□□□□ 0.25
CCND3-215ENST00000511642 ESCO1Q5FWF5 840 aa16.6■□□□□ 0.25
CCND3-215ENST00000511642 RNF214Q8ND24 703 aa16.6■□□□□ 0.25
CCND3-215ENST00000511642 LARP6Q9BRS8 491 aaKnown RBP16.6■□□□□ 0.25
CCND3-215ENST00000511642 LIMCH1Q9UPQ0 1083 aa16.6■□□□□ 0.25
CCND3-215ENST00000511642 PA2G4Q9UQ80 394 aaKnown RBP16.6■□□□□ 0.25
CCND3-215ENST00000511642 SETD1BQ9UPS6 1966 aaKnown RBP16.6■□□□□ 0.25
CCND3-215ENST00000511642 LARGE1O95461 756 aa16.6■□□□□ 0.25
CCND3-215ENST00000511642 CPA1P15085 419 aa16.6■□□□□ 0.25
CCND3-215ENST00000511642 PTH1RQ03431 593 aa16.6■□□□□ 0.25
CCND3-215ENST00000511642 OS9Q13438 667 aaPredicted RBP16.6■□□□□ 0.25
CCND3-215ENST00000511642 KSR2Q6VAB6 950 aa16.6■□□□□ 0.25
CCND3-215ENST00000511642 ARHGEF25Q86VW2 580 aa16.6■□□□□ 0.25
CCND3-215ENST00000511642 CLASRPQ8N2M8 674 aaKnown RBP16.6■□□□□ 0.25
CCND3-215ENST00000511642 KCNB2Q92953 911 aa16.6■□□□□ 0.25
CCND3-215ENST00000511642 TSPY26PQ9H489 355 aa16.6■□□□□ 0.25
CCND3-215ENST00000511642 ECHDC1Q9NTX5 307 aa16.6■□□□□ 0.25
CCND3-215ENST00000511642 CAMTA1Q9Y6Y1 1673 aa16.6■□□□□ 0.25
CCND3-215ENST00000511642 ZNF500O60304 480 aaPredicted RBP16.59■□□□□ 0.25
CCND3-215ENST00000511642 CWF19L2Q2TBE0 894 aaKnown RBP16.59■□□□□ 0.25
CCND3-215ENST00000511642 SIPA1L3O60292 1781 aaPredicted RBP16.59■□□□□ 0.25
CCND3-215ENST00000511642 ZSCAN22P10073 491 aaPredicted RBP16.59■□□□□ 0.25
CCND3-215ENST00000511642 KIAA1211Q6ZU35 1233 aa16.59■□□□□ 0.25
CCND3-215ENST00000511642 SYAP1Q96A49 352 aaPredicted RBP16.59■□□□□ 0.25
CCND3-215ENST00000511642 KAZALD1Q96I82 304 aa16.59■□□□□ 0.25
CCND3-215ENST00000511642 HYPKQ9NX55 129 aa16.59■□□□□ 0.25
CCND3-215ENST00000511642 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.59■□□□□ 0.25
CCND3-215ENST00000511642 GCP02774 474 aa16.58■□□□□ 0.25
CCND3-215ENST00000511642 SYT1P21579 422 aa16.58■□□□□ 0.25
CCND3-215ENST00000511642 DIAPH3Q9NSV4 1193 aa16.58■□□□□ 0.25
CCND3-215ENST00000511642 CNPY2Q9Y2B0 182 aa16.58■□□□□ 0.25
CCND3-215ENST00000511642 ZKSCAN5Q9Y2L8 839 aa16.58■□□□□ 0.25
CCND3-215ENST00000511642 TPM2P07951 284 aa16.58■□□□□ 0.24
CCND3-215ENST00000511642 CASTP20810 708 aaKnown RBP16.58■□□□□ 0.24
CCND3-215ENST00000511642 ADCK5Q3MIX3 580 aa16.58■□□□□ 0.24
CCND3-215ENST00000511642 C9orf78Q9NZ63 289 aaPredicted RBP16.58■□□□□ 0.24
CCND3-215ENST00000511642 ADAMTS7Q9UKP4 1686 aa16.57■□□□□ 0.24
CCND3-215ENST00000511642 STX6O43752 255 aa16.57■□□□□ 0.24
CCND3-215ENST00000511642 C1orf141Q5JVX7 400 aa16.57■□□□□ 0.24
CCND3-215ENST00000511642 DNAJC5Q9H3Z4 198 aa16.57■□□□□ 0.24
CCND3-215ENST00000511642 UTYO14607 1347 aa16.57■□□□□ 0.24
CCND3-215ENST00000511642 LMTK3Q96Q04 1460 aa16.57■□□□□ 0.24
CCND3-215ENST00000511642 ST3GAL1Q11201 340 aa16.57■□□□□ 0.24
CCND3-215ENST00000511642 SUCLG2Q96I99 432 aa16.57■□□□□ 0.24
CCND3-215ENST00000511642 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.57■□□□□ 0.24
CCND3-215ENST00000511642 PRPF40BQ6NWY9 871 aaKnown RBP16.56■□□□□ 0.24
CCND3-215ENST00000511642 ERC1Q8IUD2 1116 aa16.56■□□□□ 0.24
CCND3-215ENST00000511642 ANKRD24Q8TF21 1146 aa16.56■□□□□ 0.24
CCND3-215ENST00000511642 RUFY2Q8WXA3 655 aa16.56■□□□□ 0.24
CCND3-215ENST00000511642 ZSWIM6Q9HCJ5 1215 aa16.56■□□□□ 0.24
CCND3-215ENST00000511642 TCHHQ07283 1943 aa16.56■□□□□ 0.24
CCND3-215ENST00000511642 SASH1O94885 1247 aa16.56■□□□□ 0.24
CCND3-215ENST00000511642 F13A1P00488 732 aa16.56■□□□□ 0.24
CCND3-215ENST00000511642 VPS53Q5VIR6 699 aa16.56■□□□□ 0.24
CCND3-215ENST00000511642 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.56■□□□□ 0.24
CCND3-215ENST00000511642 ANKLE2Q86XL3 938 aa16.56■□□□□ 0.24
CCND3-215ENST00000511642 TM6SF1Q9BZW5 370 aa16.56■□□□□ 0.24
CCND3-215ENST00000511642 PHF14O94880 888 aa16.55■□□□□ 0.24
CCND3-215ENST00000511642 IFIT2P09913 472 aaKnown RBP16.55■□□□□ 0.24
CCND3-215ENST00000511642 NECTIN1Q15223 517 aa16.55■□□□□ 0.24
CCND3-215ENST00000511642 AACSQ86V21 672 aa16.55■□□□□ 0.24
CCND3-215ENST00000511642 LINS1Q8NG48 757 aa16.55■□□□□ 0.24
CCND3-215ENST00000511642 UBE2Q2Q8WVN8 375 aa16.55■□□□□ 0.24
CCND3-215ENST00000511642 JAKMIP1Q96N16 626 aaKnown RBP16.55■□□□□ 0.24
CCND3-215ENST00000511642 SMC3Q9UQE7 1217 aa16.55■□□□□ 0.24
CCND3-215ENST00000511642 CCDC171Q6TFL3 1326 aa16.55■□□□□ 0.24
CCND3-215ENST00000511642 GRM8O00222 908 aa16.55■□□□□ 0.24
CCND3-215ENST00000511642 MCM5P33992 734 aa16.55■□□□□ 0.24
CCND3-215ENST00000511642 PDIA6Q15084 440 aa16.55■□□□□ 0.24
CCND3-215ENST00000511642 EVI5LQ96CN4 794 aa16.55■□□□□ 0.24
CCND3-215ENST00000511642 ORAI2Q96SN7 254 aa16.55■□□□□ 0.24
CCND3-215ENST00000511642 CCDC39Q9UFE4 941 aa16.55■□□□□ 0.24
CCND3-215ENST00000511642 AXIN2Q9Y2T1 843 aa16.55■□□□□ 0.24
CCND3-215ENST00000511642 XPCQ01831 940 aaPredicted RBP16.54■□□□□ 0.24
CCND3-215ENST00000511642 CCDC183Q5T5S1 534 aa16.54■□□□□ 0.24
CCND3-215ENST00000511642 CCDC83Q8IWF9 413 aa16.54■□□□□ 0.24
CCND3-215ENST00000511642 EAF2Q96CJ1 260 aaPredicted RBP16.54■□□□□ 0.24
CCND3-215ENST00000511642 GPATCH3Q96I76 525 aa16.54■□□□□ 0.24
CCND3-215ENST00000511642 BICC1Q9H694 974 aaKnown RBP16.54■□□□□ 0.24
CCND3-215ENST00000511642 PDRG1Q9NUG6 133 aa16.54■□□□□ 0.24
CCND3-215ENST00000511642 ZNF142P52746 1687 aaPredicted RBP16.54■□□□□ 0.24
CCND3-215ENST00000511642 SNRKQ9NRH2 765 aa16.53■□□□□ 0.24
CCND3-215ENST00000511642 MTMR6Q9Y217 621 aa16.53■□□□□ 0.24
CCND3-215ENST00000511642 DTNBO60941 627 aa16.53■□□□□ 0.24
CCND3-215ENST00000511642 GJB2P29033 226 aa16.53■□□□□ 0.24
CCND3-215ENST00000511642 UBE2HP62256 183 aa16.53■□□□□ 0.24
CCND3-215ENST00000511642 COL9A3Q14050 684 aaPredicted RBP16.53■□□□□ 0.24
CCND3-215ENST00000511642 FAM227BQ96M60 508 aa16.53■□□□□ 0.24
CCND3-215ENST00000511642 DDX21Q9NR30 783 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCND3-215ENST00000511642 TRPM3Q9HCF6 1732 aaPredicted RBP16.53■□□□□ 0.24
CCND3-215ENST00000511642 RRP9O43818 475 aaKnown RBP16.52■□□□□ 0.24
CCND3-215ENST00000511642 IGKV5-2P06315 115 aa16.52■□□□□ 0.24
CCND3-215ENST00000511642 TMEM132AQ24JP5 1023 aa16.52■□□□□ 0.24
CCND3-215ENST00000511642 TLR7Q9NYK1 1049 aaKnown RBP16.52■□□□□ 0.24
CCND3-215ENST00000511642 RBM8AQ9Y5S9 174 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms