RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 RNF20Q5VTR2 975 aa11.77□□□□□ -0.53
POLR2J3-215ENST00000511313 RAB11FIP3O75154 756 aa11.77□□□□□ -0.53
POLR2J3-215ENST00000511313 SART3Q15020 963 aaKnown RBP11.77□□□□□ -0.53
POLR2J3-215ENST00000511313 PHLPP1O60346 1717 aa11.77□□□□□ -0.53
POLR2J3-215ENST00000511313 KIF22Q14807 665 aa11.76□□□□□ -0.53
POLR2J3-215ENST00000511313 DPP8Q6V1X1 898 aaPredicted RBP11.76□□□□□ -0.53
POLR2J3-215ENST00000511313 KSR2Q6VAB6 950 aa11.76□□□□□ -0.53
POLR2J3-215ENST00000511313 AKAP17AQ02040 695 aaKnown RBP11.76□□□□□ -0.53
POLR2J3-215ENST00000511313 MASTLQ96GX5 879 aa11.76□□□□□ -0.53
POLR2J3-215ENST00000511313 MYD88Q99836 296 aa11.76□□□□□ -0.53
POLR2J3-215ENST00000511313 GGA1Q9UJY5 639 aa11.76□□□□□ -0.53
POLR2J3-215ENST00000511313 ADAMTS8Q9UP79 889 aa11.76□□□□□ -0.53
POLR2J3-215ENST00000511313 ABCC6O95255 1503 aa11.76□□□□□ -0.53
POLR2J3-215ENST00000511313 NEUROD6Q96NK8 337 aa11.75□□□□□ -0.53
POLR2J3-215ENST00000511313 NECTIN2Q92692 538 aa11.75□□□□□ -0.53
POLR2J3-215ENST00000511313 ZBED9Q6R2W3 1325 aa11.75□□□□□ -0.53
POLR2J3-215ENST00000511313 MYO3BQ8WXR4 1341 aa11.75□□□□□ -0.53
POLR2J3-215ENST00000511313 PABPC4Q13310 644 aaKnown RBP eCLIP11.75□□□□□ -0.53
POLR2J3-215ENST00000511313 MTHFSDQ2M296 383 aaKnown RBP11.75□□□□□ -0.53
POLR2J3-215ENST00000511313 PNMA2Q9UL42 364 aa11.75□□□□□ -0.53
POLR2J3-215ENST00000511313 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.75□□□□□ -0.53
POLR2J3-215ENST00000511313 RPAP2Q8IXW5 612 aaPredicted RBP11.75□□□□□ -0.53
POLR2J3-215ENST00000511313 LINS1Q8NG48 757 aa11.75□□□□□ -0.53
POLR2J3-215ENST00000511313 PDE8AO60658 829 aa11.74□□□□□ -0.53
POLR2J3-215ENST00000511313 R3HDM1Q15032 1099 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-215ENST00000511313 DZIP1Q86YF9 867 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-215ENST00000511313 MPNDQ8N594 471 aa11.74□□□□□ -0.53
POLR2J3-215ENST00000511313 CABP5Q9NP86 173 aa11.74□□□□□ -0.53
POLR2J3-215ENST00000511313 NARFQ9UHQ1 456 aa11.74□□□□□ -0.53
POLR2J3-215ENST00000511313 CNTNAP4Q9C0A0 1308 aa11.74□□□□□ -0.53
POLR2J3-215ENST00000511313 DHX37Q8IY37 1157 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-215ENST00000511313 SH2D4AQ9H788 454 aa11.74□□□□□ -0.53
POLR2J3-215ENST00000511313 FBXO3Q9UK99 471 aa11.74□□□□□ -0.53
POLR2J3-215ENST00000511313 AHDC1Q5TGY3 1603 aaPredicted RBP11.74□□□□□ -0.53
POLR2J3-215ENST00000511313 USP32Q8NFA0 1604 aa11.74□□□□□ -0.53
POLR2J3-215ENST00000511313 MIER1Q8N108 512 aa11.74□□□□□ -0.53
POLR2J3-215ENST00000511313 DIAPH3Q9NSV4 1193 aa11.73□□□□□ -0.53
POLR2J3-215ENST00000511313 DCAF15Q66K64 600 aa11.73□□□□□ -0.53
POLR2J3-215ENST00000511313 MCM10Q7L590 875 aa11.73□□□□□ -0.53
POLR2J3-215ENST00000511313 ZSCAN29Q8IWY8 852 aaPredicted RBP11.73□□□□□ -0.53
POLR2J3-215ENST00000511313 ARHGAP45Q92619 1136 aa11.73□□□□□ -0.53
POLR2J3-215ENST00000511313 CDK11BP21127 795 aaKnown RBP11.73□□□□□ -0.53
POLR2J3-215ENST00000511313 IL27Q8NEV9 243 aa11.73□□□□□ -0.53
POLR2J3-215ENST00000511313 DCPSQ96C86 337 aaKnown RBP11.73□□□□□ -0.53
POLR2J3-215ENST00000511313 DNAJC2Q99543 621 aaKnown RBP11.73□□□□□ -0.53
POLR2J3-215ENST00000511313 ZBTB3Q9H5J0 574 aa11.73□□□□□ -0.53
POLR2J3-215ENST00000511313 SERPINB2P05120 415 aa11.72□□□□□ -0.53
POLR2J3-215ENST00000511313 MAP3K12Q12852 859 aa11.72□□□□□ -0.53
POLR2J3-215ENST00000511313 VPS33BQ9H267 617 aa11.72□□□□□ -0.53
POLR2J3-215ENST00000511313 TAOK3Q9H2K8 898 aa11.72□□□□□ -0.53
POLR2J3-215ENST00000511313 TOMM22Q9NS69 142 aa11.72□□□□□ -0.53
POLR2J3-215ENST00000511313 CARMIL3Q8ND23 1372 aa11.72□□□□□ -0.53
POLR2J3-215ENST00000511313 DNAJC10Q8IXB1 793 aa11.72□□□□□ -0.53
POLR2J3-215ENST00000511313 ATF5Q9Y2D1 282 aaPredicted RBP11.72□□□□□ -0.53
POLR2J3-215ENST00000511313 RGS12O14924 1447 aa11.72□□□□□ -0.53
POLR2J3-215ENST00000511313 BECN1Q14457 450 aa11.72□□□□□ -0.53
POLR2J3-215ENST00000511313 PLIN1O60240 522 aa11.71□□□□□ -0.53
POLR2J3-215ENST00000511313 CRKLP46109 303 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-215ENST00000511313 CRACR2BQ8N4Y2 399 aaPredicted RBP11.71□□□□□ -0.53
POLR2J3-215ENST00000511313 KAT6BQ8WYB5 2073 aa11.71□□□□□ -0.53
POLR2J3-215ENST00000511313 TNS2Q63HR2 1409 aa11.71□□□□□ -0.53
POLR2J3-215ENST00000511313 PDE3AQ14432 1141 aa11.71□□□□□ -0.53
POLR2J3-215ENST00000511313 EXOSC9Q06265 439 aaKnown RBP11.71□□□□□ -0.54
POLR2J3-215ENST00000511313 GPBP1L1Q9HC44 474 aaPredicted RBP11.71□□□□□ -0.54
POLR2J3-215ENST00000511313 CTNNA3Q9UI47 895 aa11.71□□□□□ -0.54
POLR2J3-215ENST00000511313 ECE1P42892 770 aa11.71□□□□□ -0.54
POLR2J3-215ENST00000511313 XAGE3Q8WTP9 111 aa11.71□□□□□ -0.54
POLR2J3-215ENST00000511313 QRICH2Q9H0J4 1663 aa11.71□□□□□ -0.54
POLR2J3-215ENST00000511313 PPLO60437 1756 aa11.71□□□□□ -0.54
POLR2J3-215ENST00000511313 IRS4O14654 1257 aaPredicted RBP11.7□□□□□ -0.54
POLR2J3-215ENST00000511313 RBM27Q9P2N5 1060 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-215ENST00000511313 NCLP19338 710 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-215ENST00000511313 LDHAL6AQ6ZMR3 332 aa11.7□□□□□ -0.54
POLR2J3-215ENST00000511313 BRIP1Q9BX63 1249 aa11.7□□□□□ -0.54
POLR2J3-215ENST00000511313 PPIP5K2O43314 1243 aa11.7□□□□□ -0.54
POLR2J3-215ENST00000511313 NKX1-1Q15270 411 aaPredicted RBP11.7□□□□□ -0.54
POLR2J3-215ENST00000511313 SULF1Q8IWU6 871 aa11.7□□□□□ -0.54
POLR2J3-215ENST00000511313 RSPH6AQ9H0K4 717 aa11.7□□□□□ -0.54
POLR2J3-215ENST00000511313 GPTP24298 496 aa11.69□□□□□ -0.54
POLR2J3-215ENST00000511313 IL15P40933 162 aaPredicted RBP11.69□□□□□ -0.54
POLR2J3-215ENST00000511313 SUPT20HL1Q3ZLR7 823 aa11.69□□□□□ -0.54
POLR2J3-215ENST00000511313 PNMA8AQ86V59 439 aaPredicted RBP11.69□□□□□ -0.54
POLR2J3-215ENST00000511313 WDR66Q8TBY9 1149 aa11.69□□□□□ -0.54
POLR2J3-215ENST00000511313 LRP2BPQ9P2M1 347 aa11.69□□□□□ -0.54
POLR2J3-215ENST00000511313 LEMD3Q9Y2U8 911 aa11.69□□□□□ -0.54
POLR2J3-215ENST00000511313 SLC5A4Q9NY91 659 aa11.69□□□□□ -0.54
POLR2J3-215ENST00000511313 MAP3K15Q6ZN16 1313 aa11.69□□□□□ -0.54
POLR2J3-215ENST00000511313 GLRX3O76003 335 aaKnown RBP11.69□□□□□ -0.54
POLR2J3-215ENST00000511313 MMP10P09238 476 aa11.69□□□□□ -0.54
POLR2J3-215ENST00000511313 COPS6Q7L5N1 327 aa11.69□□□□□ -0.54
POLR2J3-215ENST00000511313 ARMC9Q7Z3E5 817 aa11.69□□□□□ -0.54
POLR2J3-215ENST00000511313 RAI14Q9P0K7 980 aa11.69□□□□□ -0.54
POLR2J3-215ENST00000511313 TRIM6-TRIM34B2RNG4 842 aa11.69□□□□□ -0.54
POLR2J3-215ENST00000511313 APPP05067 770 aa11.69□□□□□ -0.54
POLR2J3-215ENST00000511313 FLIIQ13045 1269 aa11.69□□□□□ -0.54
POLR2J3-215ENST00000511313 ZKSCAN1P17029 563 aaPredicted RBP11.68□□□□□ -0.54
POLR2J3-215ENST00000511313 STYK1Q6J9G0 422 aa11.68□□□□□ -0.54
POLR2J3-215ENST00000511313 GCC1Q96CN9 775 aa11.68□□□□□ -0.54
POLR2J3-215ENST00000511313 EHMT1Q9H9B1 1298 aa11.68□□□□□ -0.54
POLR2J3-215ENST00000511313 HEG1Q9ULI3 1381 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms