RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 ZDHHC3Q9NYG2 299 aa8.73□□□□□ -1.01
HMGB1P47-201ENST00000511281 PARP2Q9UGN5 583 aa8.73□□□□□ -1.01
HMGB1P47-201ENST00000511281 SPATA31C2B4DYI2 1134 aa8.72□□□□□ -1.01
HMGB1P47-201ENST00000511281 ZC3H6P61129 1189 aaKnown RBP8.72□□□□□ -1.01
HMGB1P47-201ENST00000511281 TSNAXIP1Q2TAA8 658 aa8.72□□□□□ -1.01
HMGB1P47-201ENST00000511281 IER5Q5VY09 327 aa8.72□□□□□ -1.01
HMGB1P47-201ENST00000511281 ALG1LQ6GMV1 187 aa8.72□□□□□ -1.01
HMGB1P47-201ENST00000511281 FAM13BQ9NYF5 915 aa8.72□□□□□ -1.01
HMGB1P47-201ENST00000511281 KLK14Q9P0G3 267 aa8.72□□□□□ -1.01
HMGB1P47-201ENST00000511281 RPLP1P05386 114 aaKnown RBP8.71□□□□□ -1.02
HMGB1P47-201ENST00000511281 MAPK8P45983 427 aa8.71□□□□□ -1.02
HMGB1P47-201ENST00000511281 RELBQ01201 579 aa8.71□□□□□ -1.02
HMGB1P47-201ENST00000511281 ATP2B2Q01814 1243 aa8.71□□□□□ -1.02
HMGB1P47-201ENST00000511281 XPCQ01831 940 aaPredicted RBP8.71□□□□□ -1.02
HMGB1P47-201ENST00000511281 TMEM214Q6NUQ4 689 aaKnown RBP8.71□□□□□ -1.02
HMGB1P47-201ENST00000511281 EDEM1Q92611 657 aa8.71□□□□□ -1.02
HMGB1P47-201ENST00000511281 DUSP9Q99956 384 aaKnown RBP8.71□□□□□ -1.02
HMGB1P47-201ENST00000511281 BCS1LQ9Y276 419 aa8.71□□□□□ -1.02
HMGB1P47-201ENST00000511281 A0A0G2JS52 829 aa8.7□□□□□ -1.02
HMGB1P47-201ENST00000511281 TGFBR3LH3BV60 316 aa8.7□□□□□ -1.02
HMGB1P47-201ENST00000511281 J3QL48 77 aa8.7□□□□□ -1.02
HMGB1P47-201ENST00000511281 GTF2E1P29083 439 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P47-201ENST00000511281 TXLNAP40222 546 aa8.7□□□□□ -1.02
HMGB1P47-201ENST00000511281 GNASQ5JWF2 1037 aa8.7□□□□□ -1.02
HMGB1P47-201ENST00000511281 TREML1Q86YW5 311 aa8.7□□□□□ -1.02
HMGB1P47-201ENST00000511281 FRMD6Q96NE9 622 aa8.7□□□□□ -1.02
HMGB1P47-201ENST00000511281 NIF3L1Q9GZT8 377 aa8.7□□□□□ -1.02
HMGB1P47-201ENST00000511281 METTL5Q9NRN9 209 aaKnown RBP8.7□□□□□ -1.02
HMGB1P47-201ENST00000511281 PARP3Q9Y6F1 533 aa8.7□□□□□ -1.02
HMGB1P47-201ENST00000511281 SPINT1O43278 529 aa8.69□□□□□ -1.02
HMGB1P47-201ENST00000511281 SORBS3O60504 671 aa8.69□□□□□ -1.02
HMGB1P47-201ENST00000511281 PCSK2P16519 638 aa8.69□□□□□ -1.02
HMGB1P47-201ENST00000511281 SMPD1P17405 629 aa8.69□□□□□ -1.02
HMGB1P47-201ENST00000511281 DNM1Q05193 864 aaKnown RBP8.69□□□□□ -1.02
HMGB1P47-201ENST00000511281 FOXC1Q12948 553 aa8.69□□□□□ -1.02
HMGB1P47-201ENST00000511281 C4orf17Q53FE4 359 aa8.69□□□□□ -1.02
HMGB1P47-201ENST00000511281 WDR44Q5JSH3 913 aa8.69□□□□□ -1.02
HMGB1P47-201ENST00000511281 TSEN34Q9BSV6 310 aaKnown RBP8.69□□□□□ -1.02
HMGB1P47-201ENST00000511281 CFHR5Q9BXR6 569 aa8.69□□□□□ -1.02
HMGB1P47-201ENST00000511281 DNAJC25Q9H1X3 360 aa8.69□□□□□ -1.02
HMGB1P47-201ENST00000511281 DMGDHQ9UI17 866 aaKnown RBP8.69□□□□□ -1.02
HMGB1P47-201ENST00000511281 NEFLP07196 543 aa8.68□□□□□ -1.02
HMGB1P47-201ENST00000511281 GNA15P30679 374 aa8.68□□□□□ -1.02
HMGB1P47-201ENST00000511281 PRR20EP86478 221 aa8.68□□□□□ -1.02
HMGB1P47-201ENST00000511281 PRR20CP86479 221 aa8.68□□□□□ -1.02
HMGB1P47-201ENST00000511281 PRR20DP86480 221 aa8.68□□□□□ -1.02
HMGB1P47-201ENST00000511281 PRR20BP86481 221 aa8.68□□□□□ -1.02
HMGB1P47-201ENST00000511281 PRR20AP86496 221 aa8.68□□□□□ -1.02
HMGB1P47-201ENST00000511281 HDLBPQ00341 1268 aaKnown RBP8.68□□□□□ -1.02
HMGB1P47-201ENST00000511281 CSRNP1Q96S65 589 aa8.68□□□□□ -1.02
HMGB1P47-201ENST00000511281 ZNF395Q9H8N7 513 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P47-201ENST00000511281 WWC3Q9ULE0 1092 aa8.68□□□□□ -1.02
HMGB1P47-201ENST00000511281 PNMA6FA0A0J9YX94 578 aa8.67□□□□□ -1.02
HMGB1P47-201ENST00000511281 TTC24A2A3L6 582 aaPredicted RBP8.67□□□□□ -1.02
HMGB1P47-201ENST00000511281 NBPF1Q3BBV0 1214 aa8.67□□□□□ -1.02
HMGB1P47-201ENST00000511281 XKR5Q6UX68 686 aa8.67□□□□□ -1.02
HMGB1P47-201ENST00000511281 CYP4X1Q8N118 509 aa8.67□□□□□ -1.02
HMGB1P47-201ENST00000511281 USP35Q9P2H5 1018 aa8.67□□□□□ -1.02
HMGB1P47-201ENST00000511281 SHROOM4Q9ULL8 1493 aa8.67□□□□□ -1.02
HMGB1P47-201ENST00000511281 MICAL2O94851 1124 aa8.66□□□□□ -1.02
HMGB1P47-201ENST00000511281 METTL16Q86W50 562 aaKnown RBP8.66□□□□□ -1.02
HMGB1P47-201ENST00000511281 SREK1Q8WXA9 508 aaKnown RBP8.66□□□□□ -1.02
HMGB1P47-201ENST00000511281 NUDT16Q96DE0 195 aaKnown RBP8.66□□□□□ -1.02
HMGB1P47-201ENST00000511281 MRS2Q9HD23 443 aa8.66□□□□□ -1.02
HMGB1P47-201ENST00000511281 PLA2G4AP47712 749 aa8.65□□□□□ -1.02
HMGB1P47-201ENST00000511281 PSMD2Q13200 908 aa8.65□□□□□ -1.02
HMGB1P47-201ENST00000511281 SLC27A3Q5K4L6 730 aa8.65□□□□□ -1.02
HMGB1P47-201ENST00000511281 RHPN1Q8TCX5 695 aa8.65□□□□□ -1.02
HMGB1P47-201ENST00000511281 GPR152Q8TDT2 470 aa8.65□□□□□ -1.02
HMGB1P47-201ENST00000511281 PIK3R5Q8WYR1 880 aa8.65□□□□□ -1.02
HMGB1P47-201ENST00000511281 SETDB2Q96T68 719 aa8.65□□□□□ -1.02
HMGB1P47-201ENST00000511281 GGNBP2Q9H3C7 697 aa8.65□□□□□ -1.02
HMGB1P47-201ENST00000511281 RNF19AQ9NV58 838 aa8.65□□□□□ -1.02
HMGB1P47-201ENST00000511281 EIF1AYO14602 144 aaKnown RBP8.64□□□□□ -1.03
HMGB1P47-201ENST00000511281 OPLAHO14841 1288 aa8.64□□□□□ -1.03
HMGB1P47-201ENST00000511281 FANCCQ00597 558 aa8.64□□□□□ -1.03
HMGB1P47-201ENST00000511281 RAD51AP2Q09MP3 1159 aa8.64□□□□□ -1.03
HMGB1P47-201ENST00000511281 SUSD3Q96L08 255 aa8.64□□□□□ -1.03
HMGB1P47-201ENST00000511281 FAM161BQ96MY7 647 aa8.64□□□□□ -1.03
HMGB1P47-201ENST00000511281 ANKIB1Q9P2G1 1089 aa8.64□□□□□ -1.03
HMGB1P47-201ENST00000511281 TATP17735 454 aaPredicted RBP8.63□□□□□ -1.03
HMGB1P47-201ENST00000511281 ATP4AP20648 1035 aa8.63□□□□□ -1.03
HMGB1P47-201ENST00000511281 ERCC5P28715 1186 aaPredicted RBP8.63□□□□□ -1.03
HMGB1P47-201ENST00000511281 TRIM67Q6ZTA4 783 aa8.63□□□□□ -1.03
HMGB1P47-201ENST00000511281 LINC00528Q8N1L1 170 aa8.63□□□□□ -1.03
HMGB1P47-201ENST00000511281 TMEM87AQ8NBN3 555 aa8.63□□□□□ -1.03
HMGB1P47-201ENST00000511281 DRC1Q96MC2 740 aa8.63□□□□□ -1.03
HMGB1P47-201ENST00000511281 INSM2Q96T92 566 aaPredicted RBP8.63□□□□□ -1.03
HMGB1P47-201ENST00000511281 AK5Q9Y6K8 562 aa8.63□□□□□ -1.03
HMGB1P47-201ENST00000511281 INPP5BP32019 993 aa8.62□□□□□ -1.03
HMGB1P47-201ENST00000511281 MMRN1Q13201 1228 aa8.62□□□□□ -1.03
HMGB1P47-201ENST00000511281 ORC1Q13415 861 aa8.62□□□□□ -1.03
HMGB1P47-201ENST00000511281 NAALADL2Q58DX5 795 aa8.62□□□□□ -1.03
HMGB1P47-201ENST00000511281 PDE12Q6L8Q7 609 aaKnown RBP8.62□□□□□ -1.03
HMGB1P47-201ENST00000511281 NBPF10Q6P3W6 841 aaKnown RBP8.62□□□□□ -1.03
HMGB1P47-201ENST00000511281 CRELD1Q96HD1 420 aa8.62□□□□□ -1.03
HMGB1P47-201ENST00000511281 C11orf16Q9NQ32 467 aa8.62□□□□□ -1.03
HMGB1P47-201ENST00000511281 VTI1BQ9UEU0 232 aa8.62□□□□□ -1.03
HMGB1P47-201ENST00000511281 GIPC1O14908 333 aa8.61□□□□□ -1.03
HMGB1P47-201ENST00000511281 CPNE3O75131 537 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms