RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 KDM3BQ7LBC6 1761 aa10.16□□□□□ -0.78
SMAD1-209ENST00000511125 MRC1P22897 1456 aa10.16□□□□□ -0.78
SMAD1-209ENST00000511125 PTPRCP08575 1304 aa10.16□□□□□ -0.78
SMAD1-209ENST00000511125 UTRNP46939 3433 aa10.16□□□□□ -0.78
SMAD1-209ENST00000511125 LRP10Q7Z4F1 713 aa10.15□□□□□ -0.78
SMAD1-209ENST00000511125 C5P01031 1676 aa10.15□□□□□ -0.78
SMAD1-209ENST00000511125 WNK3Q9BYP7 1800 aa10.15□□□□□ -0.78
SMAD1-209ENST00000511125 THSD7AQ9UPZ6 1657 aa10.15□□□□□ -0.78
SMAD1-209ENST00000511125 IGKV5-2P06315 115 aa10.15□□□□□ -0.78
SMAD1-209ENST00000511125 NEXNQ0ZGT2 675 aa10.15□□□□□ -0.78
SMAD1-209ENST00000511125 UBE3BQ7Z3V4 1068 aa10.15□□□□□ -0.78
SMAD1-209ENST00000511125 LRRFIP2Q9Y608 721 aaKnown RBP10.15□□□□□ -0.78
SMAD1-209ENST00000511125 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.15□□□□□ -0.78
SMAD1-209ENST00000511125 SIPA1L3O60292 1781 aaPredicted RBP10.15□□□□□ -0.79
SMAD1-209ENST00000511125 BEND3Q5T5X7 828 aa10.15□□□□□ -0.79
SMAD1-209ENST00000511125 MSL1Q68DK7 614 aa10.15□□□□□ -0.79
SMAD1-209ENST00000511125 VSIG10Q8N0Z9 540 aa10.15□□□□□ -0.79
SMAD1-209ENST00000511125 ARHGAP45Q92619 1136 aa10.15□□□□□ -0.79
SMAD1-209ENST00000511125 FAM89AQ96GI7 184 aa10.15□□□□□ -0.79
SMAD1-209ENST00000511125 ABCC4O15439 1325 aa10.14□□□□□ -0.79
SMAD1-209ENST00000511125 NPHP1O15259 732 aa10.14□□□□□ -0.79
SMAD1-209ENST00000511125 MS4A1P11836 297 aa10.14□□□□□ -0.79
SMAD1-209ENST00000511125 USPL1Q5W0Q7 1092 aa10.14□□□□□ -0.79
SMAD1-209ENST00000511125 USP44Q9H0E7 712 aa10.14□□□□□ -0.79
SMAD1-209ENST00000511125 A0A087WZG4 1122 aa10.14□□□□□ -0.79
SMAD1-209ENST00000511125 RTCBQ9Y3I0 505 aaKnown RBP10.14□□□□□ -0.79
SMAD1-209ENST00000511125 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.13□□□□□ -0.79
SMAD1-209ENST00000511125 UBTFL1P0CB47 393 aaPredicted RBP10.13□□□□□ -0.79
SMAD1-209ENST00000511125 NUTM1Q86Y26 1132 aa10.13□□□□□ -0.79
SMAD1-209ENST00000511125 ARHGEF1Q92888 912 aaKnown RBP10.13□□□□□ -0.79
SMAD1-209ENST00000511125 PDGFDQ9GZP0 370 aaPredicted RBP10.13□□□□□ -0.79
SMAD1-209ENST00000511125 RFC4P35249 363 aa10.13□□□□□ -0.79
SMAD1-209ENST00000511125 RGS3P49796 1198 aa10.13□□□□□ -0.79
SMAD1-209ENST00000511125 CCT4P50991 539 aaKnown RBP10.13□□□□□ -0.79
SMAD1-209ENST00000511125 PLBD2Q8NHP8 589 aa10.13□□□□□ -0.79
SMAD1-209ENST00000511125 KLHDC4Q8TBB5 520 aa10.13□□□□□ -0.79
SMAD1-209ENST00000511125 ZBTB40Q9NUA8 1239 aa10.13□□□□□ -0.79
SMAD1-209ENST00000511125 BRPF1P55201 1214 aaPredicted RBP10.13□□□□□ -0.79
SMAD1-209ENST00000511125 ZNF827Q17R98 1081 aa10.13□□□□□ -0.79
SMAD1-209ENST00000511125 INTS3Q68E01 1043 aaKnown RBP10.13□□□□□ -0.79
SMAD1-209ENST00000511125 METTL22Q9BUU2 404 aaPredicted RBP10.13□□□□□ -0.79
SMAD1-209ENST00000511125 ADAMTS7Q9UKP4 1686 aa10.13□□□□□ -0.79
SMAD1-209ENST00000511125 EIF5P55010 431 aaKnown RBP10.12□□□□□ -0.79
SMAD1-209ENST00000511125 NIP7Q9Y221 180 aaKnown RBP eCLIP10.12□□□□□ -0.79
SMAD1-209ENST00000511125 NEURL1BA8MQ27 555 aa10.12□□□□□ -0.79
SMAD1-209ENST00000511125 ZPR1O75312 459 aa10.12□□□□□ -0.79
SMAD1-209ENST00000511125 TRAPPC3LQ5T215 181 aa10.12□□□□□ -0.79
SMAD1-209ENST00000511125 CHMP4AQ9BY43 222 aa10.12□□□□□ -0.79
SMAD1-209ENST00000511125 WWC3Q9ULE0 1092 aa10.12□□□□□ -0.79
SMAD1-209ENST00000511125 BTAF1O14981 1849 aa10.12□□□□□ -0.79
SMAD1-209ENST00000511125 GTF2E1P29083 439 aaPredicted RBP10.11□□□□□ -0.79
SMAD1-209ENST00000511125 IL6STP40189 918 aaPredicted RBP10.11□□□□□ -0.79
SMAD1-209ENST00000511125 PLEKHG2Q9H7P9 1386 aa10.11□□□□□ -0.79
SMAD1-209ENST00000511125 PNMA6EA0A0J9YXQ4 647 aa10.11□□□□□ -0.79
SMAD1-209ENST00000511125 HCLS1P14317 486 aaPredicted RBP10.11□□□□□ -0.79
SMAD1-209ENST00000511125 SIL1Q9H173 461 aa10.11□□□□□ -0.79
SMAD1-209ENST00000511125 TRMT112Q9UI30 125 aaKnown RBP10.11□□□□□ -0.79
SMAD1-209ENST00000511125 MAP3K15Q6ZN16 1313 aa10.11□□□□□ -0.79
SMAD1-209ENST00000511125 EPHA10Q5JZY3 1008 aa10.11□□□□□ -0.79
SMAD1-209ENST00000511125 LINS1Q8NG48 757 aa10.11□□□□□ -0.79
SMAD1-209ENST00000511125 SUCLG2Q96I99 432 aa10.11□□□□□ -0.79
SMAD1-209ENST00000511125 ANO8Q9HCE9 1232 aaPredicted RBP10.11□□□□□ -0.79
SMAD1-209ENST00000511125 SOS1Q07889 1333 aaPredicted RBP10.1□□□□□ -0.79
SMAD1-209ENST00000511125 GCKRQ14397 625 aa10.1□□□□□ -0.79
SMAD1-209ENST00000511125 SIRT2Q8IXJ6 389 aa10.1□□□□□ -0.79
SMAD1-209ENST00000511125 PA2G4Q9UQ80 394 aaKnown RBP10.1□□□□□ -0.79
SMAD1-209ENST00000511125 EXOC6BQ9Y2D4 811 aa10.1□□□□□ -0.79
SMAD1-209ENST00000511125 GRM8O00222 908 aa10.1□□□□□ -0.79
SMAD1-209ENST00000511125 SMARCA5O60264 1052 aaPredicted RBP10.1□□□□□ -0.79
SMAD1-209ENST00000511125 GNAI2P04899 355 aa10.1□□□□□ -0.79
SMAD1-209ENST00000511125 TCIRG1Q13488 830 aa10.1□□□□□ -0.79
SMAD1-209ENST00000511125 TBC1D9BQ66K14 1250 aa10.1□□□□□ -0.79
SMAD1-209ENST00000511125 ILDR2Q71H61 639 aa10.1□□□□□ -0.79
SMAD1-209ENST00000511125 MYH14Q7Z406 1995 aaKnown RBP10.1□□□□□ -0.79
SMAD1-209ENST00000511125 COL15A1P39059 1388 aa10.1□□□□□ -0.79
SMAD1-209ENST00000511125 RPS6KA4O75676 772 aa10.09□□□□□ -0.79
SMAD1-209ENST00000511125 BICC1Q9H694 974 aaKnown RBP10.09□□□□□ -0.79
SMAD1-209ENST00000511125 SRGAP3O43295 1099 aa10.09□□□□□ -0.79
SMAD1-209ENST00000511125 CAMTA2O94983 1202 aa10.09□□□□□ -0.79
SMAD1-209ENST00000511125 GIGYF2Q6Y7W6 1299 aaKnown RBP10.09□□□□□ -0.79
SMAD1-209ENST00000511125 CWC25Q9NXE8 425 aaPredicted RBP10.09□□□□□ -0.79
SMAD1-209ENST00000511125 SUSD4Q5VX71 490 aa10.09□□□□□ -0.79
SMAD1-209ENST00000511125 PPP1R42Q7Z4L9 355 aa10.09□□□□□ -0.79
SMAD1-209ENST00000511125 BAG6P46379 1132 aa10.08□□□□□ -0.8
SMAD1-209ENST00000511125 UBN2Q6ZU65 1347 aa10.08□□□□□ -0.8
SMAD1-209ENST00000511125 PSDA5PKW4 1024 aaPredicted RBP10.08□□□□□ -0.8
SMAD1-209ENST00000511125 ANKRD45Q5TZF3 282 aa10.08□□□□□ -0.8
SMAD1-209ENST00000511125 ZNF594Q96JF6 807 aaPredicted RBP10.08□□□□□ -0.8
SMAD1-209ENST00000511125 LNPKQ9C0E8 428 aa10.08□□□□□ -0.8
SMAD1-209ENST00000511125 GNAI3P08754 354 aa10.08□□□□□ -0.8
SMAD1-209ENST00000511125 CEP85Q6P2H3 762 aa10.08□□□□□ -0.8
SMAD1-209ENST00000511125 LMBR1LQ6UX01 489 aa10.08□□□□□ -0.8
SMAD1-209ENST00000511125 COL23A1Q86Y22 540 aaPredicted RBP10.08□□□□□ -0.8
SMAD1-209ENST00000511125 OS9Q13438 667 aaPredicted RBP10.07□□□□□ -0.8
SMAD1-209ENST00000511125 NLRP10Q86W26 655 aa10.07□□□□□ -0.8
SMAD1-209ENST00000511125 CAMKK2Q96RR4 588 aa10.07□□□□□ -0.8
SMAD1-209ENST00000511125 RWDD1Q9H446 243 aaPredicted RBP10.07□□□□□ -0.8
SMAD1-209ENST00000511125 BCL2L12Q9HB09 334 aa10.07□□□□□ -0.8
SMAD1-209ENST00000511125 PLSCR1O15162 318 aa10.07□□□□□ -0.8
SMAD1-209ENST00000511125 KAZALD1Q96I82 304 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms