RNA–Protein interactions for RNA: ENST00000510982.5

PDGFC-206, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-206ENST00000510982 PNISRQ8TF01 805 aaKnown RBP11.48□□□□□ -0.57
PDGFC-206ENST00000510982 PNNQ9H307 717 aaKnown RBP11.48□□□□□ -0.57
PDGFC-206ENST00000510982 ZC3H4Q9UPT8 1303 aaKnown RBP11.48□□□□□ -0.57
PDGFC-206ENST00000510982 SRGNP10124 158 aa11.47□□□□□ -0.57
PDGFC-206ENST00000510982 VEGFAP15692 232 aaPredicted RBP11.47□□□□□ -0.57
PDGFC-206ENST00000510982 ERFEQ4G0M1 354 aa11.47□□□□□ -0.57
PDGFC-206ENST00000510982 STYK1Q6J9G0 422 aa11.47□□□□□ -0.57
PDGFC-206ENST00000510982 NGEFQ8N5V2 710 aa11.47□□□□□ -0.57
PDGFC-206ENST00000510982 DNAJC5GQ8N7S2 189 aa11.47□□□□□ -0.57
PDGFC-206ENST00000510982 MASTLQ96GX5 879 aa11.47□□□□□ -0.57
PDGFC-206ENST00000510982 NIP7Q9Y221 180 aaKnown RBP eCLIP11.47□□□□□ -0.57
PDGFC-206ENST00000510982 FAM177BA6PVY3 158 aa11.46□□□□□ -0.57
PDGFC-206ENST00000510982 GTF2E1P29083 439 aaPredicted RBP11.46□□□□□ -0.57
PDGFC-206ENST00000510982 NFE2L2Q16236 605 aa11.46□□□□□ -0.57
PDGFC-206ENST00000510982 PLEKHF1Q96S99 279 aa11.46□□□□□ -0.57
PDGFC-206ENST00000510982 CEP350Q5VT06 3117 aa11.46□□□□□ -0.58
PDGFC-206ENST00000510982 MAPK8IP3Q9UPT6 1336 aa11.45□□□□□ -0.58
PDGFC-206ENST00000510982 HTRA3P83110 453 aa11.45□□□□□ -0.58
PDGFC-206ENST00000510982 HLFQ16534 295 aa11.45□□□□□ -0.58
PDGFC-206ENST00000510982 PRPF40BQ6NWY9 871 aaKnown RBP11.45□□□□□ -0.58
PDGFC-206ENST00000510982 SMC1BQ8NDV3 1235 aa11.45□□□□□ -0.58
PDGFC-206ENST00000510982 THUMPD2Q9BTF0 503 aaKnown RBP11.45□□□□□ -0.58
PDGFC-206ENST00000510982 TAOK3Q9H2K8 898 aa11.45□□□□□ -0.58
PDGFC-206ENST00000510982 RRP7AQ9Y3A4 280 aaKnown RBP11.45□□□□□ -0.58
PDGFC-206ENST00000510982 RGL2O15211 777 aa11.44□□□□□ -0.58
PDGFC-206ENST00000510982 NPR1P16066 1061 aa11.44□□□□□ -0.58
PDGFC-206ENST00000510982 EIF4A1P60842 406 aaKnown RBP11.44□□□□□ -0.58
PDGFC-206ENST00000510982 SOGA3Q5TF21 947 aa11.44□□□□□ -0.58
PDGFC-206ENST00000510982 CCDC88AQ3V6T2 1871 aa11.44□□□□□ -0.58
PDGFC-206ENST00000510982 ANKRD31Q8N7Z5 1873 aa11.43□□□□□ -0.58
PDGFC-206ENST00000510982 MYL6BP14649 208 aa11.43□□□□□ -0.58
PDGFC-206ENST00000510982 RALBP1Q15311 655 aa11.43□□□□□ -0.58
PDGFC-206ENST00000510982 IFFO2Q5TF58 517 aa11.43□□□□□ -0.58
PDGFC-206ENST00000510982 DLEC1Q9Y238 1755 aa11.43□□□□□ -0.58
PDGFC-206ENST00000510982 LTBP3Q9NS15 1303 aa11.42□□□□□ -0.58
PDGFC-206ENST00000510982 KLRG2A4D1S0 409 aaPredicted RBP11.42□□□□□ -0.58
PDGFC-206ENST00000510982 POTECB2RU33 542 aa11.42□□□□□ -0.58
PDGFC-206ENST00000510982 ERVV-1B6SEH8 477 aa11.42□□□□□ -0.58
PDGFC-206ENST00000510982 ALDH1B1P30837 517 aa11.42□□□□□ -0.58
PDGFC-206ENST00000510982 RIPK4P57078 832 aa11.42□□□□□ -0.58
PDGFC-206ENST00000510982 KIF6Q6ZMV9 814 aa11.42□□□□□ -0.58
PDGFC-206ENST00000510982 C7orf43Q8WVR3 580 aa11.42□□□□□ -0.58
PDGFC-206ENST00000510982 SCN7AQ01118 1682 aa11.42□□□□□ -0.58
PDGFC-206ENST00000510982 DDNO94850 711 aaPredicted RBP11.41□□□□□ -0.58
PDGFC-206ENST00000510982 DDX10Q13206 875 aaKnown RBP11.41□□□□□ -0.58
PDGFC-206ENST00000510982 CCDC93Q567U6 631 aa11.41□□□□□ -0.58
PDGFC-206ENST00000510982 TTLL7Q6ZT98 887 aa11.41□□□□□ -0.58
PDGFC-206ENST00000510982 KLRG1Q96E93 195 aa11.41□□□□□ -0.58
PDGFC-206ENST00000510982 NYXQ9GZU5 481 aa11.41□□□□□ -0.58
PDGFC-206ENST00000510982 SLX4Q8IY92 1834 aa11.41□□□□□ -0.58
PDGFC-206ENST00000510982 MAP3K15Q6ZN16 1313 aa11.4□□□□□ -0.58
PDGFC-206ENST00000510982 EIF2S2P20042 333 aaKnown RBP11.4□□□□□ -0.58
PDGFC-206ENST00000510982 GPTP24298 496 aa11.4□□□□□ -0.58
PDGFC-206ENST00000510982 NUTM1Q86Y26 1132 aa11.4□□□□□ -0.58
PDGFC-206ENST00000510982 RTKN2Q8IZC4 609 aa11.4□□□□□ -0.58
PDGFC-206ENST00000510982 ZBTB3Q9H5J0 574 aa11.4□□□□□ -0.58
PDGFC-206ENST00000510982 TSPYL4Q9UJ04 414 aa11.4□□□□□ -0.58
PDGFC-206ENST00000510982 DLG5Q8TDM6 1919 aa11.39□□□□□ -0.59
PDGFC-206ENST00000510982 OLFM4Q6UX06 510 aa11.39□□□□□ -0.59
PDGFC-206ENST00000510982 ZNF277Q9NRM2 450 aaPredicted RBP11.39□□□□□ -0.59
PDGFC-206ENST00000510982 TNRC6CQ9HCJ0 1690 aaKnown RBP11.39□□□□□ -0.59
PDGFC-206ENST00000510982 FER1L6Q2WGJ9 1857 aa11.38□□□□□ -0.59
PDGFC-206ENST00000510982 TMPOP42166 694 aaKnown RBP11.38□□□□□ -0.59
PDGFC-206ENST00000510982 FKBP4Q02790 459 aaKnown RBP eCLIP11.38□□□□□ -0.59
PDGFC-206ENST00000510982 NEUROD2Q15784 382 aa11.38□□□□□ -0.59
PDGFC-206ENST00000510982 SUSD4Q5VX71 490 aa11.38□□□□□ -0.59
PDGFC-206ENST00000510982 SYNE4Q8N205 404 aa11.38□□□□□ -0.59
PDGFC-206ENST00000510982 BCORQ6W2J9 1755 aa11.38□□□□□ -0.59
PDGFC-206ENST00000510982 COL11A2P13942 1736 aaPredicted RBP11.38□□□□□ -0.59
PDGFC-206ENST00000510982 LMOD3Q0VAK6 560 aa11.37□□□□□ -0.59
PDGFC-206ENST00000510982 CHADLQ6NUI6 762 aa11.37□□□□□ -0.59
PDGFC-206ENST00000510982 GIGYF2Q6Y7W6 1299 aaKnown RBP11.37□□□□□ -0.59
PDGFC-206ENST00000510982 ZNF34Q8IZ26 560 aa11.37□□□□□ -0.59
PDGFC-206ENST00000510982 RPGRQ92834 1020 aaKnown RBP11.37□□□□□ -0.59
PDGFC-206ENST00000510982 BABAM1Q9NWV8 329 aa11.37□□□□□ -0.59
PDGFC-206ENST00000510982 DICER1Q9UPY3 1922 aaKnown RBP11.37□□□□□ -0.59
PDGFC-206ENST00000510982 ERBB4Q15303 1308 aa11.36□□□□□ -0.59
PDGFC-206ENST00000510982 IQCA1LA6NCM1 817 aa11.36□□□□□ -0.59
PDGFC-206ENST00000510982 IARSP41252 1262 aaKnown RBP11.36□□□□□ -0.59
PDGFC-206ENST00000510982 PDIA6Q15084 440 aa11.36□□□□□ -0.59
PDGFC-206ENST00000510982 CRY2Q49AN0 593 aa11.36□□□□□ -0.59
PDGFC-206ENST00000510982 PPP1R42Q7Z4L9 355 aa11.36□□□□□ -0.59
PDGFC-206ENST00000510982 CCDC146Q8IYE0 955 aa11.36□□□□□ -0.59
PDGFC-206ENST00000510982 JMYQ8N9B5 988 aa11.36□□□□□ -0.59
PDGFC-206ENST00000510982 NECTIN2Q92692 538 aa11.36□□□□□ -0.59
PDGFC-206ENST00000510982 CACNA1SQ13698 1873 aa11.36□□□□□ -0.59
PDGFC-206ENST00000510982 WDR90Q96KV7 1748 aa11.35□□□□□ -0.59
PDGFC-206ENST00000510982 TCERG1O14776 1098 aaKnown RBP11.35□□□□□ -0.59
PDGFC-206ENST00000510982 ANXA1P04083 346 aa11.35□□□□□ -0.59
PDGFC-206ENST00000510982 POTEIP0CG38 1075 aa11.35□□□□□ -0.59
PDGFC-206ENST00000510982 POTEJP0CG39 1038 aa11.35□□□□□ -0.59
PDGFC-206ENST00000510982 HOXA10P31260 410 aaPredicted RBP11.35□□□□□ -0.59
PDGFC-206ENST00000510982 AIMP1Q12904 312 aaKnown RBP11.35□□□□□ -0.59
PDGFC-206ENST00000510982 PARP10Q53GL7 1025 aa11.35□□□□□ -0.59
PDGFC-206ENST00000510982 CC2D2BQ6DHV5 1058 aa11.35□□□□□ -0.59
PDGFC-206ENST00000510982 JDP2Q8WYK2 163 aa11.35□□□□□ -0.59
PDGFC-206ENST00000510982 RBM17Q96I25 401 aaKnown RBP11.35□□□□□ -0.59
PDGFC-206ENST00000510982 NLRP3Q96P20 1036 aa11.35□□□□□ -0.59
PDGFC-206ENST00000510982 LAS1LQ9Y4W2 734 aaKnown RBP11.35□□□□□ -0.59
PDGFC-206ENST00000510982 TIAM2Q8IVF5 1701 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms