RNA–Protein interactions for RNA: ENST00000510362.5

RETREG1-206, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best)

Gene RETREG1, Length 1,054 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-206ENST00000510362 ADAMTS2O95450 1211 aa12.74□□□□□ -0.37
RETREG1-206ENST00000510362 F12P00748 615 aaPredicted RBP12.74□□□□□ -0.37
RETREG1-206ENST00000510362 NR6A1Q15406 480 aa12.74□□□□□ -0.37
RETREG1-206ENST00000510362 POTEAQ6S8J7 498 aa12.74□□□□□ -0.37
RETREG1-206ENST00000510362 CCER1Q8TC90 406 aaPredicted RBP12.74□□□□□ -0.37
RETREG1-206ENST00000510362 NUDT12Q9BQG2 462 aa12.74□□□□□ -0.37
RETREG1-206ENST00000510362 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.74□□□□□ -0.37
RETREG1-206ENST00000510362 CRYBG1Q9Y4K1 1723 aa12.74□□□□□ -0.37
RETREG1-206ENST00000510362 CCNYL3P0C7X3 344 aa12.73□□□□□ -0.37
RETREG1-206ENST00000510362 NGLY1Q96IV0 654 aa12.73□□□□□ -0.37
RETREG1-206ENST00000510362 BRD4O60885 1362 aaPredicted RBP12.72□□□□□ -0.37
RETREG1-206ENST00000510362 ATAD2Q6PL18 1390 aa12.72□□□□□ -0.37
RETREG1-206ENST00000510362 ACEP12821 1306 aa12.72□□□□□ -0.37
RETREG1-206ENST00000510362 GDPD2Q9HCC8 539 aa12.72□□□□□ -0.37
RETREG1-206ENST00000510362 MAP10Q9P2G4 905 aa12.72□□□□□ -0.37
RETREG1-206ENST00000510362 TBC1D2BQ9UPU7 963 aa12.72□□□□□ -0.37
RETREG1-206ENST00000510362 AKAP12Q02952 1782 aa12.71□□□□□ -0.37
RETREG1-206ENST00000510362 NWD2Q9ULI1 1742 aa12.71□□□□□ -0.37
RETREG1-206ENST00000510362 PLCH1Q4KWH8 1693 aa12.71□□□□□ -0.37
RETREG1-206ENST00000510362 PHRF1Q9P1Y6 1649 aaKnown RBP12.71□□□□□ -0.37
RETREG1-206ENST00000510362 A6NJR5 290 aa12.71□□□□□ -0.37
RETREG1-206ENST00000510362 RAD21O60216 631 aa12.71□□□□□ -0.37
RETREG1-206ENST00000510362 NDUFB9Q9Y6M9 179 aa12.71□□□□□ -0.37
RETREG1-206ENST00000510362 FNBP4Q8N3X1 1017 aaPredicted RBP12.7□□□□□ -0.38
RETREG1-206ENST00000510362 EVA1BQ9NVM1 165 aa12.7□□□□□ -0.38
RETREG1-206ENST00000510362 CDK12Q9NYV4 1490 aaPredicted RBP12.7□□□□□ -0.38
RETREG1-206ENST00000510362 CTHP32929 405 aa12.69□□□□□ -0.38
RETREG1-206ENST00000510362 PRM3Q9NNZ6 103 aa12.69□□□□□ -0.38
RETREG1-206ENST00000510362 USP21Q9UK80 565 aa12.69□□□□□ -0.38
RETREG1-206ENST00000510362 COL14A1Q05707 1796 aaKnown RBP12.69□□□□□ -0.38
RETREG1-206ENST00000510362 GPR37L1O60883 481 aa12.68□□□□□ -0.38
RETREG1-206ENST00000510362 RXRBP28702 533 aa12.68□□□□□ -0.38
RETREG1-206ENST00000510362 CCDC24Q8N4L8 307 aa12.68□□□□□ -0.38
RETREG1-206ENST00000510362 CABP1Q9NZU7 370 aa12.68□□□□□ -0.38
RETREG1-206ENST00000510362 FCF1Q9Y324 198 aaKnown RBP12.68□□□□□ -0.38
RETREG1-206ENST00000510362 USP6P35125 1406 aa12.68□□□□□ -0.38
RETREG1-206ENST00000510362 NRKQ7Z2Y5 1582 aa12.68□□□□□ -0.38
RETREG1-206ENST00000510362 MON2Q7Z3U7 1717 aa12.68□□□□□ -0.38
RETREG1-206ENST00000510362 SLIT2O94813 1529 aa12.67□□□□□ -0.38
RETREG1-206ENST00000510362 PPEF1O14829 653 aaPredicted RBP12.67□□□□□ -0.38
RETREG1-206ENST00000510362 KCNH2Q12809 1159 aa12.67□□□□□ -0.38
RETREG1-206ENST00000510362 TRPC5Q9UL62 973 aaPredicted RBP12.67□□□□□ -0.38
RETREG1-206ENST00000510362 USP47Q96K76 1375 aa12.67□□□□□ -0.38
RETREG1-206ENST00000510362 BCL9LQ86UU0 1499 aa12.66□□□□□ -0.38
RETREG1-206ENST00000510362 ATRNO75882 1429 aa12.66□□□□□ -0.38
RETREG1-206ENST00000510362 ABL2P42684 1182 aa12.66□□□□□ -0.38
RETREG1-206ENST00000510362 RBM6P78332 1123 aaKnown RBP12.66□□□□□ -0.38
RETREG1-206ENST00000510362 PUS7Q96PZ0 661 aaKnown RBP12.66□□□□□ -0.38
RETREG1-206ENST00000510362 QTRT2Q9H974 415 aaKnown RBP12.66□□□□□ -0.38
RETREG1-206ENST00000510362 PIK3C2AO00443 1686 aa12.65□□□□□ -0.38
RETREG1-206ENST00000510362 ST20-MTHFSA0A0A6YYL1 179 aa12.65□□□□□ -0.38
RETREG1-206ENST00000510362 NRAPQ86VF7 1730 aa12.65□□□□□ -0.38
RETREG1-206ENST00000510362 CPSF1Q10570 1443 aaKnown RBP12.64□□□□□ -0.39
RETREG1-206ENST00000510362 SSH2Q76I76 1423 aa12.64□□□□□ -0.39
RETREG1-206ENST00000510362 RNF223E7ERA6 249 aa12.64□□□□□ -0.39
RETREG1-206ENST00000510362 PPP1R18Q6NYC8 613 aa12.64□□□□□ -0.39
RETREG1-206ENST00000510362 ABTB2Q8N961 1025 aa12.64□□□□□ -0.39
RETREG1-206ENST00000510362 TESK2Q96S53 571 aa12.64□□□□□ -0.39
RETREG1-206ENST00000510362 NINLQ9Y2I6 1382 aa12.64□□□□□ -0.39
RETREG1-206ENST00000510362 IFFO2Q5TF58 517 aa12.63□□□□□ -0.39
RETREG1-206ENST00000510362 PTCRAQ6ISU1 281 aaPredicted RBP12.63□□□□□ -0.39
RETREG1-206ENST00000510362 NLRP13Q86W25 1043 aa12.63□□□□□ -0.39
RETREG1-206ENST00000510362 UNC5CLQ8IV45 518 aa12.63□□□□□ -0.39
RETREG1-206ENST00000510362 KTN1Q86UP2 1357 aaKnown RBP12.63□□□□□ -0.39
RETREG1-206ENST00000510362 USP19O94966 1318 aa12.62□□□□□ -0.39
RETREG1-206ENST00000510362 TTC21AQ8NDW8 1320 aa12.62□□□□□ -0.39
RETREG1-206ENST00000510362 RGS12O14924 1447 aa12.62□□□□□ -0.39
RETREG1-206ENST00000510362 USP54Q70EL1 1684 aa12.62□□□□□ -0.39
RETREG1-206ENST00000510362 GGCXP38435 758 aa12.62□□□□□ -0.39
RETREG1-206ENST00000510362 FKBPLQ9UIM3 349 aa12.62□□□□□ -0.39
RETREG1-206ENST00000510362 SLIT3O75094 1523 aa12.62□□□□□ -0.39
RETREG1-206ENST00000510362 TRAK2O60296 914 aa12.61□□□□□ -0.39
RETREG1-206ENST00000510362 TMF1P82094 1093 aa12.61□□□□□ -0.39
RETREG1-206ENST00000510362 IRF5Q13568 498 aa12.61□□□□□ -0.39
RETREG1-206ENST00000510362 HDGFL2Q7Z4V5 671 aaPredicted RBP12.61□□□□□ -0.39
RETREG1-206ENST00000510362 ANKLE1Q8NAG6 615 aa12.61□□□□□ -0.39
RETREG1-206ENST00000510362 UNC93B1Q9H1C4 597 aa12.61□□□□□ -0.39
RETREG1-206ENST00000510362 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.61□□□□□ -0.39
RETREG1-206ENST00000510362 GLI3P10071 1580 aa12.6□□□□□ -0.39
RETREG1-206ENST00000510362 CD163L1Q9NR16 1453 aa12.6□□□□□ -0.39
RETREG1-206ENST00000510362 KIAA0232Q92628 1395 aa12.6□□□□□ -0.39
RETREG1-206ENST00000510362 FAM83GA6ND36 823 aa12.6□□□□□ -0.39
RETREG1-206ENST00000510362 CDCA8Q53HL2 280 aa12.6□□□□□ -0.39
RETREG1-206ENST00000510362 NUTM2GQ5VZR2 741 aa12.6□□□□□ -0.39
RETREG1-206ENST00000510362 PNMA1Q8ND90 353 aa12.6□□□□□ -0.39
RETREG1-206ENST00000510362 TMC1Q8TDI8 760 aa12.6□□□□□ -0.39
RETREG1-206ENST00000510362 PRDM11Q9NQV5 511 aa12.6□□□□□ -0.39
RETREG1-206ENST00000510362 TERF2IPQ9NYB0 399 aa12.6□□□□□ -0.39
RETREG1-206ENST00000510362 TTC21BQ7Z4L5 1316 aa12.6□□□□□ -0.39
RETREG1-206ENST00000510362 CPDO75976 1380 aa12.59□□□□□ -0.39
RETREG1-206ENST00000510362 LMO7Q8WWI1 1683 aa12.59□□□□□ -0.39
RETREG1-206ENST00000510362 VPS72Q15906 364 aa12.59□□□□□ -0.39
RETREG1-206ENST00000510362 PLA2G2CQ5R387 149 aa12.59□□□□□ -0.39
RETREG1-206ENST00000510362 PLA2G2EQ9NZK7 142 aa12.59□□□□□ -0.39
RETREG1-206ENST00000510362 EDC4Q6P2E9 1401 aaKnown RBP12.59□□□□□ -0.39
RETREG1-206ENST00000510362 BTG4Q9NY30 223 aa12.58□□□□□ -0.4
RETREG1-206ENST00000510362 A0A1W2PP64 1363 aa12.57□□□□□ -0.4
RETREG1-206ENST00000510362 GCP02774 474 aa12.57□□□□□ -0.4
RETREG1-206ENST00000510362 ZC3H6P61129 1189 aaKnown RBP12.57□□□□□ -0.4
RETREG1-206ENST00000510362 MYOM1P52179 1685 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms