RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 TIMELESSQ9UNS1 1208 aa13.82□□□□□ -0.2
COPS4-207ENST00000509317 VIRMAQ69YN4 1812 aaKnown RBP13.81□□□□□ -0.2
COPS4-207ENST00000509317 FAM177BA6PVY3 158 aa13.81□□□□□ -0.2
COPS4-207ENST00000509317 U2SURPO15042 1029 aaKnown RBP13.81□□□□□ -0.2
COPS4-207ENST00000509317 ITGBL1O95965 494 aaPredicted RBP13.81□□□□□ -0.2
COPS4-207ENST00000509317 IL6STP40189 918 aaPredicted RBP13.81□□□□□ -0.2
COPS4-207ENST00000509317 LBX1P52954 281 aa13.81□□□□□ -0.2
COPS4-207ENST00000509317 ST5P78524 1137 aa13.81□□□□□ -0.2
COPS4-207ENST00000509317 TEFQ10587 303 aa13.81□□□□□ -0.2
COPS4-207ENST00000509317 LDHDQ86WU2 507 aa13.81□□□□□ -0.2
COPS4-207ENST00000509317 C7orf43Q8WVR3 580 aa13.81□□□□□ -0.2
COPS4-207ENST00000509317 CNKSR1Q969H4 720 aa13.81□□□□□ -0.2
COPS4-207ENST00000509317 MAP1SQ66K74 1059 aaPredicted RBP13.8□□□□□ -0.2
COPS4-207ENST00000509317 SLC51AQ86UW1 340 aa13.8□□□□□ -0.2
COPS4-207ENST00000509317 DZIP3Q86Y13 1208 aaKnown RBP13.8□□□□□ -0.2
COPS4-207ENST00000509317 MASTLQ96GX5 879 aa13.8□□□□□ -0.2
COPS4-207ENST00000509317 CLEC11AQ9Y240 323 aa13.8□□□□□ -0.2
COPS4-207ENST00000509317 USP16Q9Y5T5 823 aa13.8□□□□□ -0.2
COPS4-207ENST00000509317 CACNA1SQ13698 1873 aa13.8□□□□□ -0.2
COPS4-207ENST00000509317 TMEM88BA6NKF7 163 aa13.79□□□□□ -0.2
COPS4-207ENST00000509317 GNAT3A8MTJ3 354 aa13.79□□□□□ -0.2
COPS4-207ENST00000509317 CTCFP49711 727 aaPredicted RBP13.79□□□□□ -0.2
COPS4-207ENST00000509317 FMR1Q06787 632 aaKnown RBP eCLIP13.79□□□□□ -0.2
COPS4-207ENST00000509317 NBPF5PQ86XG9 351 aaPredicted RBP13.79□□□□□ -0.2
COPS4-207ENST00000509317 AIDAQ96BJ3 306 aa13.79□□□□□ -0.2
COPS4-207ENST00000509317 L3MBTL3Q96JM7 780 aaPredicted RBP13.79□□□□□ -0.2
COPS4-207ENST00000509317 FMNL2Q96PY5 1086 aa13.79□□□□□ -0.2
COPS4-207ENST00000509317 PRDM10Q9NQV6 1147 aa13.79□□□□□ -0.2
COPS4-207ENST00000509317 PDZRN3Q9UPQ7 1066 aa13.79□□□□□ -0.2
COPS4-207ENST00000509317 DICER1Q9UPY3 1922 aaKnown RBP13.79□□□□□ -0.2
COPS4-207ENST00000509317 RNF123Q5XPI4 1314 aa13.79□□□□□ -0.2
COPS4-207ENST00000509317 IQCA1LA6NCM1 817 aa13.78□□□□□ -0.2
COPS4-207ENST00000509317 CCDC93Q567U6 631 aa13.78□□□□□ -0.2
COPS4-207ENST00000509317 PHACTR3Q96KR7 559 aa13.78□□□□□ -0.2
COPS4-207ENST00000509317 WBP1LQ9NX94 342 aa13.78□□□□□ -0.2
COPS4-207ENST00000509317 COL3A1P02461 1466 aaPredicted RBP13.77□□□□□ -0.21
COPS4-207ENST00000509317 EPHX2P34913 555 aa13.77□□□□□ -0.21
COPS4-207ENST00000509317 KIF7Q2M1P5 1343 aa13.77□□□□□ -0.21
COPS4-207ENST00000509317 NPM2Q86SE8 214 aaKnown RBP13.77□□□□□ -0.21
COPS4-207ENST00000509317 TEX13AQ9BXU3 409 aaPredicted RBP13.77□□□□□ -0.21
COPS4-207ENST00000509317 HACL1Q9UJ83 578 aa13.77□□□□□ -0.21
COPS4-207ENST00000509317 BTBD11A6QL63 1104 aa13.76□□□□□ -0.21
COPS4-207ENST00000509317 HSPA8P11142 646 aaKnown RBP13.76□□□□□ -0.21
COPS4-207ENST00000509317 FKBP4Q02790 459 aaKnown RBP eCLIP13.76□□□□□ -0.21
COPS4-207ENST00000509317 SOGA3Q5TF21 947 aa13.76□□□□□ -0.21
COPS4-207ENST00000509317 CNTROBQ8N137 903 aa13.76□□□□□ -0.21
COPS4-207ENST00000509317 PER1O15534 1290 aaPredicted RBP13.75□□□□□ -0.21
COPS4-207ENST00000509317 NPR1P16066 1061 aa13.75□□□□□ -0.21
COPS4-207ENST00000509317 FAM161AQ3B820 660 aa13.75□□□□□ -0.21
COPS4-207ENST00000509317 CEMIPQ8WUJ3 1361 aa13.74□□□□□ -0.21
COPS4-207ENST00000509317 NBPF26B4DH59 902 aa13.74□□□□□ -0.21
COPS4-207ENST00000509317 GRM1Q13255 1194 aa13.74□□□□□ -0.21
COPS4-207ENST00000509317 HLFQ16534 295 aa13.74□□□□□ -0.21
COPS4-207ENST00000509317 NBPF10Q6P3W6 841 aaKnown RBP13.74□□□□□ -0.21
COPS4-207ENST00000509317 SYNE4Q8N205 404 aa13.74□□□□□ -0.21
COPS4-207ENST00000509317 NBPF15Q8N660 670 aa13.74□□□□□ -0.21
COPS4-207ENST00000509317 GAS2L2Q8NHY3 880 aa13.74□□□□□ -0.21
COPS4-207ENST00000509317 ABHD8Q96I13 439 aa13.74□□□□□ -0.21
COPS4-207ENST00000509317 ABT1Q9ULW3 272 aaKnown RBP13.74□□□□□ -0.21
COPS4-207ENST00000509317 NIP7Q9Y221 180 aaKnown RBP eCLIP13.74□□□□□ -0.21
COPS4-207ENST00000509317 COL4A5P29400 1685 aa13.74□□□□□ -0.21
COPS4-207ENST00000509317 SIPA1L3O60292 1781 aaPredicted RBP13.73□□□□□ -0.21
COPS4-207ENST00000509317 BCORQ6W2J9 1755 aa13.73□□□□□ -0.21
COPS4-207ENST00000509317 RASSF10A6NK89 507 aa13.73□□□□□ -0.21
COPS4-207ENST00000509317 PRKAR2BP31323 418 aa13.73□□□□□ -0.21
COPS4-207ENST00000509317 IARSP41252 1262 aaKnown RBP13.73□□□□□ -0.21
COPS4-207ENST00000509317 DCTN1Q14203 1278 aa13.73□□□□□ -0.21
COPS4-207ENST00000509317 DEFB115Q30KQ5 88 aa13.73□□□□□ -0.21
COPS4-207ENST00000509317 MCM10Q7L590 875 aa13.73□□□□□ -0.21
COPS4-207ENST00000509317 TSKSQ9UJT2 592 aa13.73□□□□□ -0.21
COPS4-207ENST00000509317 GJA3Q9Y6H8 435 aa13.73□□□□□ -0.21
COPS4-207ENST00000509317 ADAMTSL1Q8N6G6 1762 aa13.73□□□□□ -0.21
COPS4-207ENST00000509317 WDR33Q9C0J8 1336 aaKnown RBP13.72□□□□□ -0.21
COPS4-207ENST00000509317 KLRG2A4D1S0 409 aaPredicted RBP13.72□□□□□ -0.21
COPS4-207ENST00000509317 FZD9O00144 591 aa13.72□□□□□ -0.21
COPS4-207ENST00000509317 NUTM1Q86Y26 1132 aa13.72□□□□□ -0.21
COPS4-207ENST00000509317 ARFGEF2Q9Y6D5 1785 aa13.72□□□□□ -0.21
COPS4-207ENST00000509317 ABCC12Q96J65 1359 aa13.71□□□□□ -0.21
COPS4-207ENST00000509317 SCN4AP35499 1836 aa13.71□□□□□ -0.21
COPS4-207ENST00000509317 TRAF5O00463 557 aa13.71□□□□□ -0.21
COPS4-207ENST00000509317 TCERG1O14776 1098 aaKnown RBP13.71□□□□□ -0.21
COPS4-207ENST00000509317 PAXIP1Q6ZW49 1069 aaPredicted RBP13.71□□□□□ -0.21
COPS4-207ENST00000509317 MIS18AQ9NYP9 233 aa13.71□□□□□ -0.21
COPS4-207ENST00000509317 SNRPA1P09661 255 aaKnown RBP13.7□□□□□ -0.22
COPS4-207ENST00000509317 EPS15P42566 896 aa13.7□□□□□ -0.22
COPS4-207ENST00000509317 CYP4F22Q6NT55 531 aa13.7□□□□□ -0.22
COPS4-207ENST00000509317 CLEC4GQ6UXB4 293 aa13.7□□□□□ -0.22
COPS4-207ENST00000509317 TPTE2Q6XPS3 522 aa13.7□□□□□ -0.22
COPS4-207ENST00000509317 PNMA8AQ86V59 439 aaPredicted RBP13.7□□□□□ -0.22
COPS4-207ENST00000509317 RTKN2Q8IZC4 609 aa13.7□□□□□ -0.22
COPS4-207ENST00000509317 NGEFQ8N5V2 710 aa13.7□□□□□ -0.22
COPS4-207ENST00000509317 RSPH6AQ9H0K4 717 aa13.7□□□□□ -0.22
COPS4-207ENST00000509317 DDX21Q9NR30 783 aaKnown RBP eCLIP13.7□□□□□ -0.22
COPS4-207ENST00000509317 ZNF652Q9Y2D9 606 aa13.7□□□□□ -0.22
COPS4-207ENST00000509317 SNED1Q8TER0 1413 aa13.7□□□□□ -0.22
COPS4-207ENST00000509317 LTBP1Q14766 1721 aa13.7□□□□□ -0.22
COPS4-207ENST00000509317 CLSPNQ9HAW4 1339 aa13.69□□□□□ -0.22
COPS4-207ENST00000509317 CCDC85CA6NKD9 419 aa13.69□□□□□ -0.22
COPS4-207ENST00000509317 SLC34A2O95436 690 aa13.69□□□□□ -0.22
COPS4-207ENST00000509317 GPC2Q8N158 579 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms