RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 CNKSR1Q969H4 720 aa20.43■□□□□ 0.86
SMAD5-205ENST00000509297 COL11A2P13942 1736 aaPredicted RBP20.43■□□□□ 0.86
SMAD5-205ENST00000509297 PIP4K2AP48426 406 aaPredicted RBP20.42■□□□□ 0.86
SMAD5-205ENST00000509297 NFE2L2Q16236 605 aa20.42■□□□□ 0.86
SMAD5-205ENST00000509297 RRAGCQ9HB90 399 aa20.42■□□□□ 0.86
SMAD5-205ENST00000509297 LTBP3Q9NS15 1303 aa20.42■□□□□ 0.86
SMAD5-205ENST00000509297 KLRG2A4D1S0 409 aaPredicted RBP20.41■□□□□ 0.86
SMAD5-205ENST00000509297 NPHP1O15259 732 aa20.41■□□□□ 0.86
SMAD5-205ENST00000509297 SOGA3Q5TF21 947 aa20.41■□□□□ 0.86
SMAD5-205ENST00000509297 NBPF5PQ86XG9 351 aaPredicted RBP20.41■□□□□ 0.86
SMAD5-205ENST00000509297 CCDC24Q8N4L8 307 aa20.41■□□□□ 0.86
SMAD5-205ENST00000509297 MASTLQ96GX5 879 aa20.41■□□□□ 0.86
SMAD5-205ENST00000509297 C21orf2O43822 256 aa20.4■□□□□ 0.86
SMAD5-205ENST00000509297 DNAJC5GQ8N7S2 189 aa20.4■□□□□ 0.86
SMAD5-205ENST00000509297 LAMB4A4D0S4 1761 aa20.39■□□□□ 0.86
SMAD5-205ENST00000509297 VEGFAP15692 232 aaPredicted RBP20.39■□□□□ 0.85
SMAD5-205ENST00000509297 TPTE2Q6XPS3 522 aa20.39■□□□□ 0.85
SMAD5-205ENST00000509297 MIS18AQ9NYP9 233 aa20.39■□□□□ 0.85
SMAD5-205ENST00000509297 KDM3BQ7LBC6 1761 aa20.39■□□□□ 0.85
SMAD5-205ENST00000509297 RALBP1Q15311 655 aa20.38■□□□□ 0.85
SMAD5-205ENST00000509297 PRPF40BQ6NWY9 871 aaKnown RBP20.38■□□□□ 0.85
SMAD5-205ENST00000509297 FER1L6Q2WGJ9 1857 aa20.38■□□□□ 0.85
SMAD5-205ENST00000509297 TIAM2Q8IVF5 1701 aa20.38■□□□□ 0.85
SMAD5-205ENST00000509297 DLG5Q8TDM6 1919 aa20.37■□□□□ 0.85
SMAD5-205ENST00000509297 MAPK8IP3Q9UPT6 1336 aa20.37■□□□□ 0.85
SMAD5-205ENST00000509297 ERVV-1B6SEH8 477 aa20.37■□□□□ 0.85
SMAD5-205ENST00000509297 EIF4A1P60842 406 aaKnown RBP20.37■□□□□ 0.85
SMAD5-205ENST00000509297 SMC1BQ8NDV3 1235 aa20.37■□□□□ 0.85
SMAD5-205ENST00000509297 TAOK3Q9H2K8 898 aa20.37■□□□□ 0.85
SMAD5-205ENST00000509297 NIP7Q9Y221 180 aaKnown RBP eCLIP20.37■□□□□ 0.85
SMAD5-205ENST00000509297 ARFGEF2Q9Y6D5 1785 aa20.36■□□□□ 0.85
SMAD5-205ENST00000509297 NPR1P16066 1061 aa20.36■□□□□ 0.85
SMAD5-205ENST00000509297 DPY19L2Q6NUT2 758 aa20.36■□□□□ 0.85
SMAD5-205ENST00000509297 C7orf43Q8WVR3 580 aa20.36■□□□□ 0.85
SMAD5-205ENST00000509297 ERFEQ4G0M1 354 aa20.35■□□□□ 0.85
SMAD5-205ENST00000509297 SLX4Q8IY92 1834 aa20.34■□□□□ 0.85
SMAD5-205ENST00000509297 ERBB4Q15303 1308 aa20.34■□□□□ 0.85
SMAD5-205ENST00000509297 WDR90Q96KV7 1748 aa20.34■□□□□ 0.85
SMAD5-205ENST00000509297 HLFQ16534 295 aa20.34■□□□□ 0.85
SMAD5-205ENST00000509297 DICER1Q9UPY3 1922 aaKnown RBP20.33■□□□□ 0.85
SMAD5-205ENST00000509297 CCDC88AQ3V6T2 1871 aa20.33■□□□□ 0.85
SMAD5-205ENST00000509297 THUMPD2Q9BTF0 503 aaKnown RBP20.33■□□□□ 0.85
SMAD5-205ENST00000509297 BABAM1Q9NWV8 329 aa20.33■□□□□ 0.85
SMAD5-205ENST00000509297 ZNF219Q9P2Y4 722 aaPredicted RBP20.33■□□□□ 0.85
SMAD5-205ENST00000509297 MAP3K15Q6ZN16 1313 aa20.32■□□□□ 0.84
SMAD5-205ENST00000509297 NYXQ9GZU5 481 aa20.32■□□□□ 0.84
SMAD5-205ENST00000509297 POTECB2RU33 542 aa20.31■□□□□ 0.84
SMAD5-205ENST00000509297 CCDC93Q567U6 631 aa20.31■□□□□ 0.84
SMAD5-205ENST00000509297 IBTKQ9P2D0 1353 aaPredicted RBP20.31■□□□□ 0.84
SMAD5-205ENST00000509297 RIC1Q4ADV7 1423 aa20.3■□□□□ 0.84
SMAD5-205ENST00000509297 ALDH1B1P30837 517 aa20.3■□□□□ 0.84
SMAD5-205ENST00000509297 CRY2Q49AN0 593 aa20.3■□□□□ 0.84
SMAD5-205ENST00000509297 IFFO2Q5TF58 517 aa20.3■□□□□ 0.84
SMAD5-205ENST00000509297 KIF6Q6ZMV9 814 aa20.3■□□□□ 0.84
SMAD5-205ENST00000509297 LMOD3Q0VAK6 560 aa20.29■□□□□ 0.84
SMAD5-205ENST00000509297 KLRG1Q96E93 195 aa20.29■□□□□ 0.84
SMAD5-205ENST00000509297 RRP7AQ9Y3A4 280 aaKnown RBP20.29■□□□□ 0.84
SMAD5-205ENST00000509297 GTF2E1P29083 439 aaPredicted RBP20.28■□□□□ 0.84
SMAD5-205ENST00000509297 RIPK4P57078 832 aa20.28■□□□□ 0.84
SMAD5-205ENST00000509297 TTLL7Q6ZT98 887 aa20.28■□□□□ 0.84
SMAD5-205ENST00000509297 RTKN2Q8IZC4 609 aa20.28■□□□□ 0.84
SMAD5-205ENST00000509297 JMYQ8N9B5 988 aa20.28■□□□□ 0.84
SMAD5-205ENST00000509297 TSPYL4Q9UJ04 414 aa20.28■□□□□ 0.84
SMAD5-205ENST00000509297 FKBP4Q02790 459 aaKnown RBP eCLIP20.27■□□□□ 0.84
SMAD5-205ENST00000509297 MYBBP1AQ9BQG0 1328 aaKnown RBP20.27■□□□□ 0.83
SMAD5-205ENST00000509297 FAM177BA6PVY3 158 aa20.26■□□□□ 0.83
SMAD5-205ENST00000509297 MYL6BP14649 208 aa20.26■□□□□ 0.83
SMAD5-205ENST00000509297 TMPOP42166 694 aaKnown RBP20.26■□□□□ 0.83
SMAD5-205ENST00000509297 ZNF34Q8IZ26 560 aa20.26■□□□□ 0.83
SMAD5-205ENST00000509297 NGEFQ8N5V2 710 aa20.26■□□□□ 0.83
SMAD5-205ENST00000509297 CACNA1SQ13698 1873 aa20.26■□□□□ 0.83
SMAD5-205ENST00000509297 NUP98P52948 1817 aa20.25■□□□□ 0.83
SMAD5-205ENST00000509297 ABCC12Q96J65 1359 aa20.25■□□□□ 0.83
SMAD5-205ENST00000509297 HOXA10P31260 410 aaPredicted RBP20.25■□□□□ 0.83
SMAD5-205ENST00000509297 HTRA3P83110 453 aa20.25■□□□□ 0.83
SMAD5-205ENST00000509297 GIGYF2Q6Y7W6 1299 aaKnown RBP20.25■□□□□ 0.83
SMAD5-205ENST00000509297 LRP10Q7Z4F1 713 aa20.25■□□□□ 0.83
SMAD5-205ENST00000509297 L3MBTL3Q96JM7 780 aaPredicted RBP20.25■□□□□ 0.83
SMAD5-205ENST00000509297 UBN2Q6ZU65 1347 aa20.25■□□□□ 0.83
SMAD5-205ENST00000509297 CC2D2BQ6DHV5 1058 aa20.24■□□□□ 0.83
SMAD5-205ENST00000509297 IQCA1LA6NCM1 817 aa20.23■□□□□ 0.83
SMAD5-205ENST00000509297 DDNO94850 711 aaPredicted RBP20.23■□□□□ 0.83
SMAD5-205ENST00000509297 PDIA6Q15084 440 aa20.23■□□□□ 0.83
SMAD5-205ENST00000509297 GRIPAP1Q4V328 841 aa20.23■□□□□ 0.83
SMAD5-205ENST00000509297 PARP10Q53GL7 1025 aa20.23■□□□□ 0.83
SMAD5-205ENST00000509297 NUTM1Q86Y26 1132 aa20.23■□□□□ 0.83
SMAD5-205ENST00000509297 SNED1Q8TER0 1413 aa20.23■□□□□ 0.83
SMAD5-205ENST00000509297 ZBTB3Q9H5J0 574 aa20.23■□□□□ 0.83
SMAD5-205ENST00000509297 DDX10Q13206 875 aaKnown RBP20.22■□□□□ 0.83
SMAD5-205ENST00000509297 SUSD4Q5VX71 490 aa20.22■□□□□ 0.83
SMAD5-205ENST00000509297 PSMD1Q99460 953 aa20.22■□□□□ 0.83
SMAD5-205ENST00000509297 PCNTO95613 3336 aa20.21■□□□□ 0.83
SMAD5-205ENST00000509297 NTSR2O95665 410 aa20.21■□□□□ 0.83
SMAD5-205ENST00000509297 GPTP24298 496 aa20.21■□□□□ 0.83
SMAD5-205ENST00000509297 CHADLQ6NUI6 762 aa20.21■□□□□ 0.83
SMAD5-205ENST00000509297 ZNF277Q9NRM2 450 aaPredicted RBP20.21■□□□□ 0.83
SMAD5-205ENST00000509297 CHL1O00533 1208 aa20.2■□□□□ 0.82
SMAD5-205ENST00000509297 OLFM4Q6UX06 510 aa20.2■□□□□ 0.82
SMAD5-205ENST00000509297 PPP1R42Q7Z4L9 355 aa20.2■□□□□ 0.82
SMAD5-205ENST00000509297 RPGRQ92834 1020 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms