RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 CCNYL3P0C7X3 344 aa10.69□□□□□ -0.7
CCSER1-208ENST00000509109 CYP4X1Q8N118 509 aa10.69□□□□□ -0.7
CCSER1-208ENST00000509109 KDM4CQ9H3R0 1056 aa10.69□□□□□ -0.7
CCSER1-208ENST00000509109 POLR3EQ9NVU0 708 aa10.69□□□□□ -0.7
CCSER1-208ENST00000509109 PHRF1Q9P1Y6 1649 aaKnown RBP10.69□□□□□ -0.7
CCSER1-208ENST00000509109 DGAT1O75907 488 aa10.68□□□□□ -0.7
CCSER1-208ENST00000509109 SKOR1P84550 965 aa10.68□□□□□ -0.7
CCSER1-208ENST00000509109 QPCTQ16769 361 aa10.68□□□□□ -0.7
CCSER1-208ENST00000509109 CCDC125Q86Z20 511 aa10.68□□□□□ -0.7
CCSER1-208ENST00000509109 BRWD3Q6RI45 1802 aa10.68□□□□□ -0.7
CCSER1-208ENST00000509109 MYT1Q01538 1121 aa10.67□□□□□ -0.7
CCSER1-208ENST00000509109 VPS72Q15906 364 aa10.67□□□□□ -0.7
CCSER1-208ENST00000509109 PTPRNQ16849 979 aa10.67□□□□□ -0.7
CCSER1-208ENST00000509109 TSC1Q92574 1164 aa10.67□□□□□ -0.7
CCSER1-208ENST00000509109 MRGPRX2Q96LB1 330 aa10.67□□□□□ -0.7
CCSER1-208ENST00000509109 TOR4AQ9NXH8 423 aa10.67□□□□□ -0.7
CCSER1-208ENST00000509109 CCDC9Q9Y3X0 531 aaKnown RBP10.67□□□□□ -0.7
CCSER1-208ENST00000509109 TRPM1Q7Z4N2 1603 aa10.66□□□□□ -0.7
CCSER1-208ENST00000509109 WNT7AO00755 349 aa10.66□□□□□ -0.7
CCSER1-208ENST00000509109 NUDT16Q96DE0 195 aaKnown RBP10.66□□□□□ -0.7
CCSER1-208ENST00000509109 POLR3AO14802 1390 aaPredicted RBP10.65□□□□□ -0.7
CCSER1-208ENST00000509109 CENPJQ9HC77 1338 aaPredicted RBP10.65□□□□□ -0.7
CCSER1-208ENST00000509109 TTC24A2A3L6 582 aaPredicted RBP10.65□□□□□ -0.7
CCSER1-208ENST00000509109 CLK2P49760 499 aaKnown RBP10.65□□□□□ -0.7
CCSER1-208ENST00000509109 RC3H1Q5TC82 1133 aaKnown RBP10.65□□□□□ -0.7
CCSER1-208ENST00000509109 PRPF38BQ5VTL8 546 aaKnown RBP10.65□□□□□ -0.7
CCSER1-208ENST00000509109 CDK19Q9BWU1 502 aa10.65□□□□□ -0.7
CCSER1-208ENST00000509109 FAM117AQ9C073 453 aa10.65□□□□□ -0.7
CCSER1-208ENST00000509109 BLMP54132 1417 aaPredicted RBP10.65□□□□□ -0.7
CCSER1-208ENST00000509109 DESI1Q6ICB0 168 aa10.64□□□□□ -0.71
CCSER1-208ENST00000509109 UNC93B1Q9H1C4 597 aa10.64□□□□□ -0.71
CCSER1-208ENST00000509109 EVA1BQ9NVM1 165 aa10.64□□□□□ -0.71
CCSER1-208ENST00000509109 CTHP32929 405 aa10.63□□□□□ -0.71
CCSER1-208ENST00000509109 SRPK2P78362 688 aaKnown RBP10.63□□□□□ -0.71
CCSER1-208ENST00000509109 KCNH2Q12809 1159 aa10.63□□□□□ -0.71
CCSER1-208ENST00000509109 LINC01559Q495D7 138 aa10.63□□□□□ -0.71
CCSER1-208ENST00000509109 RSPH6AQ9H0K4 717 aa10.63□□□□□ -0.71
CCSER1-208ENST00000509109 PRDM11Q9NQV5 511 aa10.63□□□□□ -0.71
CCSER1-208ENST00000509109 BTG4Q9NY30 223 aa10.63□□□□□ -0.71
CCSER1-208ENST00000509109 PPIP5K1Q6PFW1 1433 aa10.63□□□□□ -0.71
CCSER1-208ENST00000509109 NRKQ7Z2Y5 1582 aa10.63□□□□□ -0.71
CCSER1-208ENST00000509109 BRD4O60885 1362 aaPredicted RBP10.63□□□□□ -0.71
CCSER1-208ENST00000509109 FAM83GA6ND36 823 aa10.62□□□□□ -0.71
CCSER1-208ENST00000509109 ST8SIA5O15466 376 aa10.62□□□□□ -0.71
CCSER1-208ENST00000509109 LILRB3O75022 631 aa10.62□□□□□ -0.71
CCSER1-208ENST00000509109 WNT7BP56706 349 aa10.62□□□□□ -0.71
CCSER1-208ENST00000509109 SF3B2Q13435 895 aaKnown RBP10.62□□□□□ -0.71
CCSER1-208ENST00000509109 RTL5Q5HYW3 569 aaPredicted RBP10.62□□□□□ -0.71
CCSER1-208ENST00000509109 LYPD8Q6UX82 237 aa10.62□□□□□ -0.71
CCSER1-208ENST00000509109 SEPT12Q8IYM1 358 aa10.62□□□□□ -0.71
CCSER1-208ENST00000509109 RGPD1P0DJD0 1748 aa10.61□□□□□ -0.71
CCSER1-208ENST00000509109 ACEP12821 1306 aa10.61□□□□□ -0.71
CCSER1-208ENST00000509109 THSD7AQ9UPZ6 1657 aa10.61□□□□□ -0.71
CCSER1-208ENST00000509109 PLEKHG3A1L390 1219 aa10.61□□□□□ -0.71
CCSER1-208ENST00000509109 PER1O15534 1290 aaPredicted RBP10.61□□□□□ -0.71
CCSER1-208ENST00000509109 NBPF1Q3BBV0 1214 aa10.61□□□□□ -0.71
CCSER1-208ENST00000509109 ROCK2O75116 1388 aaKnown RBP10.61□□□□□ -0.71
CCSER1-208ENST00000509109 J3QL48 77 aa10.6□□□□□ -0.71
CCSER1-208ENST00000509109 SH3BP2P78314 561 aa10.6□□□□□ -0.71
CCSER1-208ENST00000509109 KRT27Q7Z3Y8 459 aa10.6□□□□□ -0.71
CCSER1-208ENST00000509109 SNIP1Q8TAD8 396 aaKnown RBP10.6□□□□□ -0.71
CCSER1-208ENST00000509109 BAP1Q92560 729 aa10.6□□□□□ -0.71
CCSER1-208ENST00000509109 L3MBTL2Q969R5 705 aa10.6□□□□□ -0.71
CCSER1-208ENST00000509109 MAP10Q9P2G4 905 aa10.6□□□□□ -0.71
CCSER1-208ENST00000509109 KIAA0232Q92628 1395 aa10.6□□□□□ -0.71
CCSER1-208ENST00000509109 EVC2Q86UK5 1308 aa10.59□□□□□ -0.71
CCSER1-208ENST00000509109 TUSC1Q2TAM9 212 aa10.59□□□□□ -0.71
CCSER1-208ENST00000509109 NBPF8Q3BBV2 869 aa10.59□□□□□ -0.71
CCSER1-208ENST00000509109 ABTB2Q8N961 1025 aa10.59□□□□□ -0.71
CCSER1-208ENST00000509109 EHBP1Q8NDI1 1231 aa10.59□□□□□ -0.71
CCSER1-208ENST00000509109 SPATA31A5Q5VU36 1347 aa10.58□□□□□ -0.71
CCSER1-208ENST00000509109 SPATA31A7Q8IWB4 1347 aa10.58□□□□□ -0.71
CCSER1-208ENST00000509109 LMO7Q8WWI1 1683 aa10.58□□□□□ -0.72
CCSER1-208ENST00000509109 CPDO75976 1380 aa10.58□□□□□ -0.72
CCSER1-208ENST00000509109 SMPD1P17405 629 aa10.58□□□□□ -0.72
CCSER1-208ENST00000509109 PROCA1Q8NCQ7 364 aaPredicted RBP10.58□□□□□ -0.72
CCSER1-208ENST00000509109 DDRGK1Q96HY6 314 aa10.58□□□□□ -0.72
CCSER1-208ENST00000509109 AAASQ9NRG9 546 aa10.58□□□□□ -0.72
CCSER1-208ENST00000509109 USP6P35125 1406 aa10.58□□□□□ -0.72
CCSER1-208ENST00000509109 USP19O94966 1318 aa10.58□□□□□ -0.72
CCSER1-208ENST00000509109 AKAP12Q02952 1782 aa10.57□□□□□ -0.72
CCSER1-208ENST00000509109 ZNF787Q6DD87 383 aa10.57□□□□□ -0.72
CCSER1-208ENST00000509109 NLRP13Q86W25 1043 aa10.57□□□□□ -0.72
CCSER1-208ENST00000509109 SBNO2Q9Y2G9 1366 aa10.56□□□□□ -0.72
CCSER1-208ENST00000509109 NEUROD1Q13562 356 aa10.56□□□□□ -0.72
CCSER1-208ENST00000509109 NEUROD2Q15784 382 aa10.56□□□□□ -0.72
CCSER1-208ENST00000509109 TPRNQ4KMQ1 711 aa10.56□□□□□ -0.72
CCSER1-208ENST00000509109 SSH2Q76I76 1423 aa10.56□□□□□ -0.72
CCSER1-208ENST00000509109 PIK3C2AO00443 1686 aa10.56□□□□□ -0.72
CCSER1-208ENST00000509109 SPATA31A1Q5TZJ5 1347 aa10.56□□□□□ -0.72
CCSER1-208ENST00000509109 TNS1Q9HBL0 1735 aaKnown RBP10.55□□□□□ -0.72
CCSER1-208ENST00000509109 TONSLQ96HA7 1378 aa10.55□□□□□ -0.72
CCSER1-208ENST00000509109 SLIT3O75094 1523 aa10.55□□□□□ -0.72
CCSER1-208ENST00000509109 ALDH1A1P00352 501 aa10.55□□□□□ -0.72
CCSER1-208ENST00000509109 F12P00748 615 aaPredicted RBP10.55□□□□□ -0.72
CCSER1-208ENST00000509109 BAG6P46379 1132 aa10.55□□□□□ -0.72
CCSER1-208ENST00000509109 ZC3H6P61129 1189 aaKnown RBP10.55□□□□□ -0.72
CCSER1-208ENST00000509109 SKIV2LQ15477 1246 aaKnown RBP10.55□□□□□ -0.72
CCSER1-208ENST00000509109 SH3D19Q5HYK7 790 aa10.55□□□□□ -0.72
CCSER1-208ENST00000509109 NUTM2GQ5VZR2 741 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms