RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 SETDB2Q96T68 719 aa21.55■■□□□ 1.04
CXCL1-202ENST00000509101 POTEIP0CG38 1075 aa21.54■■□□□ 1.04
CXCL1-202ENST00000509101 POTEJP0CG39 1038 aa21.54■■□□□ 1.04
CXCL1-202ENST00000509101 CNKSR1Q969H4 720 aa21.54■■□□□ 1.04
CXCL1-202ENST00000509101 CEMIPQ8WUJ3 1361 aa21.53■■□□□ 1.04
CXCL1-202ENST00000509101 DDNO94850 711 aaPredicted RBP21.53■■□□□ 1.04
CXCL1-202ENST00000509101 STYK1Q6J9G0 422 aa21.53■■□□□ 1.04
CXCL1-202ENST00000509101 CHADLQ6NUI6 762 aa21.53■■□□□ 1.04
CXCL1-202ENST00000509101 KCNQ3O43525 872 aa21.52■■□□□ 1.04
CXCL1-202ENST00000509101 SRGNP10124 158 aa21.52■■□□□ 1.04
CXCL1-202ENST00000509101 PIP4K2AP48426 406 aaPredicted RBP21.52■■□□□ 1.04
CXCL1-202ENST00000509101 DZIP3Q86Y13 1208 aaKnown RBP21.52■■□□□ 1.04
CXCL1-202ENST00000509101 MKRN1Q9UHC7 482 aaKnown RBP21.52■■□□□ 1.04
CXCL1-202ENST00000509101 MASTLQ96GX5 879 aa21.51■■□□□ 1.03
CXCL1-202ENST00000509101 CREBZFQ9NS37 354 aa21.51■■□□□ 1.03
CXCL1-202ENST00000509101 BTBD11A6QL63 1104 aa21.5■■□□□ 1.03
CXCL1-202ENST00000509101 SOGA3Q5TF21 947 aa21.5■■□□□ 1.03
CXCL1-202ENST00000509101 NPC1L1Q9UHC9 1359 aa21.49■■□□□ 1.03
CXCL1-202ENST00000509101 LAMB4A4D0S4 1761 aa21.48■■□□□ 1.03
CXCL1-202ENST00000509101 USP16Q9Y5T5 823 aa21.48■■□□□ 1.03
CXCL1-202ENST00000509101 PRAMEF22A3QJZ6 481 aa21.47■■□□□ 1.03
CXCL1-202ENST00000509101 PRKAR2BP31323 418 aa21.47■■□□□ 1.03
CXCL1-202ENST00000509101 NBPF5PQ86XG9 351 aaPredicted RBP21.47■■□□□ 1.03
CXCL1-202ENST00000509101 PHACTR3Q96KR7 559 aa21.47■■□□□ 1.03
CXCL1-202ENST00000509101 ADAMTSL1Q8N6G6 1762 aa21.46■■□□□ 1.03
CXCL1-202ENST00000509101 IQCA1LA6NCM1 817 aa21.46■■□□□ 1.03
CXCL1-202ENST00000509101 CCDC93Q567U6 631 aa21.46■■□□□ 1.03
CXCL1-202ENST00000509101 CNTNAP1P78357 1384 aa21.46■■□□□ 1.03
CXCL1-202ENST00000509101 LDHDQ86WU2 507 aa21.45■■□□□ 1.02
CXCL1-202ENST00000509101 RSPH6AQ9H0K4 717 aa21.45■■□□□ 1.02
CXCL1-202ENST00000509101 ZNF652Q9Y2D9 606 aa21.45■■□□□ 1.02
CXCL1-202ENST00000509101 L3MBTL3Q96JM7 780 aaPredicted RBP21.44■■□□□ 1.02
CXCL1-202ENST00000509101 TAF1DQ9H5J8 278 aaPredicted RBP21.44■■□□□ 1.02
CXCL1-202ENST00000509101 PASKQ96RG2 1323 aa21.44■■□□□ 1.02
CXCL1-202ENST00000509101 ZNF541Q9H0D2 1346 aa21.44■■□□□ 1.02
CXCL1-202ENST00000509101 NPR1P16066 1061 aa21.43■■□□□ 1.02
CXCL1-202ENST00000509101 CLEC4GQ6UXB4 293 aa21.43■■□□□ 1.02
CXCL1-202ENST00000509101 C7orf43Q8WVR3 580 aa21.43■■□□□ 1.02
CXCL1-202ENST00000509101 ZNF277Q9NRM2 450 aaPredicted RBP21.43■■□□□ 1.02
CXCL1-202ENST00000509101 FKBP4Q02790 459 aaKnown RBP eCLIP21.42■■□□□ 1.02
CXCL1-202ENST00000509101 EAPPQ56P03 285 aaPredicted RBP21.42■■□□□ 1.02
CXCL1-202ENST00000509101 OLFM4Q6UX06 510 aa21.42■■□□□ 1.02
CXCL1-202ENST00000509101 NUP98P52948 1817 aa21.41■■□□□ 1.02
CXCL1-202ENST00000509101 FAM177BA6PVY3 158 aa21.41■■□□□ 1.02
CXCL1-202ENST00000509101 FOXN1O15353 648 aa21.41■■□□□ 1.02
CXCL1-202ENST00000509101 SNRPA1P09661 255 aaKnown RBP21.41■■□□□ 1.02
CXCL1-202ENST00000509101 MCM10Q7L590 875 aa21.41■■□□□ 1.02
CXCL1-202ENST00000509101 CFAP53Q96M91 514 aa21.41■■□□□ 1.02
CXCL1-202ENST00000509101 NIP7Q9Y221 180 aaKnown RBP eCLIP21.41■■□□□ 1.02
CXCL1-202ENST00000509101 DLG5Q8TDM6 1919 aa21.41■■□□□ 1.02
CXCL1-202ENST00000509101 KDM3BQ7LBC6 1761 aa21.39■■□□□ 1.01
CXCL1-202ENST00000509101 NBPF26B4DH59 902 aa21.39■■□□□ 1.01
CXCL1-202ENST00000509101 NBPF10Q6P3W6 841 aaKnown RBP21.39■■□□□ 1.01
CXCL1-202ENST00000509101 NBPF15Q8N660 670 aa21.39■■□□□ 1.01
CXCL1-202ENST00000509101 RTF1Q92541 710 aaKnown RBP21.39■■□□□ 1.01
CXCL1-202ENST00000509101 KLRG2A4D1S0 409 aaPredicted RBP21.38■■□□□ 1.01
CXCL1-202ENST00000509101 TPTE2Q6XPS3 522 aa21.38■■□□□ 1.01
CXCL1-202ENST00000509101 HACL1Q9UJ83 578 aa21.38■■□□□ 1.01
CXCL1-202ENST00000509101 CLEC11AQ9Y240 323 aa21.38■■□□□ 1.01
CXCL1-202ENST00000509101 RNF123Q5XPI4 1314 aa21.37■■□□□ 1.01
CXCL1-202ENST00000509101 TMEM88BA6NKF7 163 aa21.37■■□□□ 1.01
CXCL1-202ENST00000509101 DCTN1Q14203 1278 aa21.37■■□□□ 1.01
CXCL1-202ENST00000509101 ITGBL1O95965 494 aaPredicted RBP21.36■■□□□ 1.01
CXCL1-202ENST00000509101 U2AF1L5P0DN76 240 aaPredicted RBP21.36■■□□□ 1.01
CXCL1-202ENST00000509101 EPHX2P34913 555 aa21.36■■□□□ 1.01
CXCL1-202ENST00000509101 IARSP41252 1262 aaKnown RBP21.36■■□□□ 1.01
CXCL1-202ENST00000509101 VEGFBP49765 207 aa21.36■■□□□ 1.01
CXCL1-202ENST00000509101 U2AF1Q01081 240 aaKnown RBP eCLIP21.36■■□□□ 1.01
CXCL1-202ENST00000509101 RTKN2Q8IZC4 609 aa21.36■■□□□ 1.01
CXCL1-202ENST00000509101 AIDAQ96BJ3 306 aa21.36■■□□□ 1.01
CXCL1-202ENST00000509101 NUDCQ9Y266 331 aa21.36■■□□□ 1.01
CXCL1-202ENST00000509101 ABCC12Q96J65 1359 aa21.36■■□□□ 1.01
CXCL1-202ENST00000509101 HLFQ16534 295 aa21.35■■□□□ 1.01
CXCL1-202ENST00000509101 SNED1Q8TER0 1413 aa21.35■■□□□ 1.01
CXCL1-202ENST00000509101 LTBP1Q14766 1721 aa21.35■■□□□ 1.01
CXCL1-202ENST00000509101 COL4A5P29400 1685 aa21.34■■□□□ 1.01
CXCL1-202ENST00000509101 RGL2O15211 777 aa21.34■■□□□ 1.01
CXCL1-202ENST00000509101 SYNE4Q8N205 404 aa21.34■■□□□ 1.01
CXCL1-202ENST00000509101 PRDM10Q9NQV6 1147 aa21.34■■□□□ 1.01
CXCL1-202ENST00000509101 GTF2E1P29083 439 aaPredicted RBP21.33■■□□□ 1.01
CXCL1-202ENST00000509101 ALDH1B1P30837 517 aa21.33■■□□□ 1.01
CXCL1-202ENST00000509101 CTCFP49711 727 aaPredicted RBP21.33■■□□□ 1.01
CXCL1-202ENST00000509101 FZD9O00144 591 aa21.32■■□□□ 1
CXCL1-202ENST00000509101 MAP1SQ66K74 1059 aaPredicted RBP21.32■■□□□ 1
CXCL1-202ENST00000509101 TRPM7Q96QT4 1865 aa21.31■■□□□ 1
CXCL1-202ENST00000509101 PNMA8AQ86V59 439 aaPredicted RBP21.31■■□□□ 1
CXCL1-202ENST00000509101 NUTM1Q86Y26 1132 aa21.31■■□□□ 1
CXCL1-202ENST00000509101 THSD7BQ9C0I4 1608 aa21.3■■□□□ 1
CXCL1-202ENST00000509101 CNTROBQ8N137 903 aa21.3■■□□□ 1
CXCL1-202ENST00000509101 GPC2Q8N158 579 aa21.3■■□□□ 1
CXCL1-202ENST00000509101 NGEFQ8N5V2 710 aa21.3■■□□□ 1
CXCL1-202ENST00000509101 MIS18AQ9NYP9 233 aa21.3■■□□□ 1
CXCL1-202ENST00000509101 HTATSF1O43719 755 aaKnown RBP21.29■■□□□ 1
CXCL1-202ENST00000509101 PPP2R1AP30153 589 aa21.29■■□□□ 1
CXCL1-202ENST00000509101 JDP2Q8WYK2 163 aa21.29■■□□□ 1
CXCL1-202ENST00000509101 PSMD1Q99460 953 aa21.29■■□□□ 1
CXCL1-202ENST00000509101 NYXQ9GZU5 481 aa21.29■■□□□ 1
CXCL1-202ENST00000509101 WBP1LQ9NX94 342 aa21.29■■□□□ 1
CXCL1-202ENST00000509101 RASSF10A6NK89 507 aa21.28■■□□□ 1
CXCL1-202ENST00000509101 LBX1P52954 281 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms