RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 HMMRO75330 724 aa4.73□□□□□ -1.65
NEDD4-209ENST00000508871 PDE6BP35913 854 aa4.73□□□□□ -1.65
NEDD4-209ENST00000508871 RAB15P59190 212 aa4.73□□□□□ -1.65
NEDD4-209ENST00000508871 SLMAPQ14BN4 828 aa4.73□□□□□ -1.65
NEDD4-209ENST00000508871 CRBNQ96SW2 442 aa4.73□□□□□ -1.65
NEDD4-209ENST00000508871 HSP90AA2PQ14568 343 aaPredicted RBP4.73□□□□□ -1.65
NEDD4-209ENST00000508871 ARL10Q8N8L6 244 aa4.73□□□□□ -1.65
NEDD4-209ENST00000508871 PAIP2Q9BPZ3 127 aaKnown RBP4.73□□□□□ -1.65
NEDD4-209ENST00000508871 ITSN1Q15811 1721 aa4.73□□□□□ -1.65
NEDD4-209ENST00000508871 WASHC2AQ641Q2 1341 aa4.73□□□□□ -1.65
NEDD4-209ENST00000508871 WASHC2CQ9Y4E1 1318 aa4.73□□□□□ -1.65
NEDD4-209ENST00000508871 USP54Q70EL1 1684 aa4.73□□□□□ -1.65
NEDD4-209ENST00000508871 TOPAZ1Q8N9V7 1692 aa4.73□□□□□ -1.65
NEDD4-209ENST00000508871 PPP2R5EQ16537 467 aa4.73□□□□□ -1.65
NEDD4-209ENST00000508871 NBPF8Q3BBV2 869 aa4.73□□□□□ -1.65
NEDD4-209ENST00000508871 DHX16O60231 1041 aaKnown RBP4.72□□□□□ -1.65
NEDD4-209ENST00000508871 CTHP32929 405 aa4.72□□□□□ -1.65
NEDD4-209ENST00000508871 RPGRQ92834 1020 aaKnown RBP4.72□□□□□ -1.65
NEDD4-209ENST00000508871 ANAPC16Q96DE5 110 aa4.72□□□□□ -1.65
NEDD4-209ENST00000508871 CFAP53Q96M91 514 aa4.72□□□□□ -1.65
NEDD4-209ENST00000508871 FAM161BQ96MY7 647 aa4.72□□□□□ -1.65
NEDD4-209ENST00000508871 DNAI2Q9GZS0 605 aa4.72□□□□□ -1.65
NEDD4-209ENST00000508871 USP17L8P0C7I0 530 aa4.72□□□□□ -1.65
NEDD4-209ENST00000508871 ATICP31939 592 aa4.72□□□□□ -1.65
NEDD4-209ENST00000508871 DZIP1Q86YF9 867 aaKnown RBP4.72□□□□□ -1.65
NEDD4-209ENST00000508871 CYLDQ9NQC7 956 aa4.72□□□□□ -1.65
NEDD4-209ENST00000508871 NINLQ9Y2I6 1382 aa4.72□□□□□ -1.65
NEDD4-209ENST00000508871 AKAP12Q02952 1782 aa4.72□□□□□ -1.65
NEDD4-209ENST00000508871 ALKQ9UM73 1620 aa4.72□□□□□ -1.65
NEDD4-209ENST00000508871 PCSK2P16519 638 aa4.72□□□□□ -1.65
NEDD4-209ENST00000508871 CPEP16870 476 aa4.72□□□□□ -1.65
NEDD4-209ENST00000508871 SLIT1O75093 1534 aa4.72□□□□□ -1.65
NEDD4-209ENST00000508871 KIF3BO15066 747 aa4.72□□□□□ -1.65
NEDD4-209ENST00000508871 EIF3JO75822 258 aaKnown RBP4.72□□□□□ -1.65
NEDD4-209ENST00000508871 FAM69CQ0P6D2 419 aa4.72□□□□□ -1.65
NEDD4-209ENST00000508871 RPAINQ86UA6 219 aa4.72□□□□□ -1.65
NEDD4-209ENST00000508871 BANK1Q8NDB2 785 aa4.72□□□□□ -1.65
NEDD4-209ENST00000508871 TPX2Q9ULW0 747 aaKnown RBP4.72□□□□□ -1.65
NEDD4-209ENST00000508871 SFI1A8K8P3 1242 aa4.71□□□□□ -1.65
NEDD4-209ENST00000508871 MS4A1P11836 297 aa4.71□□□□□ -1.65
NEDD4-209ENST00000508871 DRC7Q8IY82 874 aa4.71□□□□□ -1.65
NEDD4-209ENST00000508871 GOPCQ9HD26 462 aa4.71□□□□□ -1.65
NEDD4-209ENST00000508871 NPC1L1Q9UHC9 1359 aa4.71□□□□□ -1.65
NEDD4-209ENST00000508871 PPP1R37O75864 691 aa4.71□□□□□ -1.66
NEDD4-209ENST00000508871 BACH2Q9BYV9 841 aa4.71□□□□□ -1.66
NEDD4-209ENST00000508871 HOMER2Q9NSB8 354 aa4.71□□□□□ -1.66
NEDD4-209ENST00000508871 SLC52A1Q9NWF4 448 aa4.71□□□□□ -1.66
NEDD4-209ENST00000508871 IRAK4Q9NWZ3 460 aa4.71□□□□□ -1.66
NEDD4-209ENST00000508871 FBXO2Q9UK22 296 aaPredicted RBP4.71□□□□□ -1.66
NEDD4-209ENST00000508871 INTUQ9ULD6 942 aa4.71□□□□□ -1.66
NEDD4-209ENST00000508871 CHCHD4Q8N4Q1 142 aa4.71□□□□□ -1.66
NEDD4-209ENST00000508871 LDHAP00338 332 aaKnown RBP4.71□□□□□ -1.66
NEDD4-209ENST00000508871 CCDC92Q53HC0 331 aaPredicted RBP4.71□□□□□ -1.66
NEDD4-209ENST00000508871 OXLD1Q5BKU9 147 aa4.71□□□□□ -1.66
NEDD4-209ENST00000508871 PRIMPOLQ96LW4 560 aa4.71□□□□□ -1.66
NEDD4-209ENST00000508871 TBC1D2Q9BYX2 928 aa4.71□□□□□ -1.66
NEDD4-209ENST00000508871 PCDHB9Q9Y5E1 797 aa4.71□□□□□ -1.66
NEDD4-209ENST00000508871 LDHBP07195 334 aaKnown RBP4.71□□□□□ -1.66
NEDD4-209ENST00000508871 CD53P19397 219 aa4.71□□□□□ -1.66
NEDD4-209ENST00000508871 TRAPPC10P48553 1259 aa4.71□□□□□ -1.66
NEDD4-209ENST00000508871 CCDC174Q6PII3 467 aa4.71□□□□□ -1.66
NEDD4-209ENST00000508871 MAATS1Q7Z4T9 603 aa4.71□□□□□ -1.66
NEDD4-209ENST00000508871 FTSJ3Q8IY81 847 aaKnown RBP4.71□□□□□ -1.66
NEDD4-209ENST00000508871 AASDHPPTQ9NRN7 309 aa4.71□□□□□ -1.66
NEDD4-209ENST00000508871 MRPL42Q9Y6G3 142 aaKnown RBP4.71□□□□□ -1.66
NEDD4-209ENST00000508871 ASXL1Q8IXJ9 1541 aa4.71□□□□□ -1.66
NEDD4-209ENST00000508871 K7ELQ4 463 aaPredicted RBP4.7□□□□□ -1.66
NEDD4-209ENST00000508871 RIC3Q7Z5B4 369 aa4.7□□□□□ -1.66
NEDD4-209ENST00000508871 SMC5Q8IY18 1101 aa4.7□□□□□ -1.66
NEDD4-209ENST00000508871 IFT57Q9NWB7 429 aa4.7□□□□□ -1.66
NEDD4-209ENST00000508871 MRVI1Q9Y6F6 885 aa4.7□□□□□ -1.66
NEDD4-209ENST00000508871 MON2Q7Z3U7 1717 aa4.7□□□□□ -1.66
NEDD4-209ENST00000508871 RASEFQ8IZ41 740 aa4.7□□□□□ -1.66
NEDD4-209ENST00000508871 LTV1Q96GA3 475 aaPredicted RBP4.7□□□□□ -1.66
NEDD4-209ENST00000508871 ARIH1Q9Y4X5 557 aaPredicted RBP4.7□□□□□ -1.66
NEDD4-209ENST00000508871 LRRC7Q96NW7 1537 aa4.7□□□□□ -1.66
NEDD4-209ENST00000508871 CDC45O75419 566 aa4.7□□□□□ -1.66
NEDD4-209ENST00000508871 CHGBP05060 677 aa4.7□□□□□ -1.66
NEDD4-209ENST00000508871 CYB5RLQ6IPT4 315 aa4.7□□□□□ -1.66
NEDD4-209ENST00000508871 KIAA1211Q6ZU35 1233 aa4.7□□□□□ -1.66
NEDD4-209ENST00000508871 TNIP3Q96KP6 325 aa4.7□□□□□ -1.66
NEDD4-209ENST00000508871 OSBPL2Q9H1P3 480 aa4.7□□□□□ -1.66
NEDD4-209ENST00000508871 DMGDHQ9UI17 866 aaKnown RBP4.7□□□□□ -1.66
NEDD4-209ENST00000508871 PRR12Q9ULL5 1215 aa4.7□□□□□ -1.66
NEDD4-209ENST00000508871 KIF7Q2M1P5 1343 aa4.7□□□□□ -1.66
NEDD4-209ENST00000508871 A2ML1A8K2U0 1454 aa4.7□□□□□ -1.66
NEDD4-209ENST00000508871 TLDC2A0PJX2 215 aa4.7□□□□□ -1.66
NEDD4-209ENST00000508871 TRERF1Q96PN7 1200 aa4.7□□□□□ -1.66
NEDD4-209ENST00000508871 MYL1P05976 194 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 TMCO3Q6UWJ1 677 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 RINLQ6ZS11 566 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 CCDC91Q7Z6B0 441 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 RNF135Q8IUD6 432 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 SMAP1Q8IYB5 467 aaPredicted RBP4.69□□□□□ -1.66
NEDD4-209ENST00000508871 MTMR8Q96EF0 704 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 CARD11Q9BXL7 1154 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 XRN1Q8IZH2 1706 aaKnown RBP4.69□□□□□ -1.66
NEDD4-209ENST00000508871 PICALMQ13492 652 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 C21orf62-AS1Q17RA5 79 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 CDK5RAP3Q96JB5 506 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms