RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 CEMIPQ8WUJ3 1361 aa8.69□□□□□ -1.02
HMGN1P16-201ENST00000508308 GNAT3A8MTJ3 354 aa8.68□□□□□ -1.02
HMGN1P16-201ENST00000508308 KCNQ3O43525 872 aa8.68□□□□□ -1.02
HMGN1P16-201ENST00000508308 ZPR1O75312 459 aa8.68□□□□□ -1.02
HMGN1P16-201ENST00000508308 EIF5P55010 431 aaKnown RBP8.68□□□□□ -1.02
HMGN1P16-201ENST00000508308 ZNF790Q6PG37 636 aa8.68□□□□□ -1.02
HMGN1P16-201ENST00000508308 RSPH6AQ9H0K4 717 aa8.68□□□□□ -1.02
HMGN1P16-201ENST00000508308 PIM2Q9P1W9 311 aa8.68□□□□□ -1.02
HMGN1P16-201ENST00000508308 PCNTO95613 3336 aa8.67□□□□□ -1.02
HMGN1P16-201ENST00000508308 HSPA6P17066 643 aa8.67□□□□□ -1.02
HMGN1P16-201ENST00000508308 CANXP27824 592 aaKnown RBP8.67□□□□□ -1.02
HMGN1P16-201ENST00000508308 PPP2R1AP30153 589 aa8.67□□□□□ -1.02
HMGN1P16-201ENST00000508308 MNX1P50219 401 aaPredicted RBP8.67□□□□□ -1.02
HMGN1P16-201ENST00000508308 PRELPP51888 382 aa8.67□□□□□ -1.02
HMGN1P16-201ENST00000508308 DALRD3Q5D0E6 543 aaKnown RBP8.67□□□□□ -1.02
HMGN1P16-201ENST00000508308 C9orf131Q5VYM1 1079 aa8.67□□□□□ -1.02
HMGN1P16-201ENST00000508308 ANKRD31Q8N7Z5 1873 aa8.67□□□□□ -1.02
HMGN1P16-201ENST00000508308 CARMIL3Q8ND23 1372 aa8.67□□□□□ -1.02
HMGN1P16-201ENST00000508308 NMRK2Q9NPI5 230 aa8.67□□□□□ -1.02
HMGN1P16-201ENST00000508308 HEG1Q9ULI3 1381 aa8.67□□□□□ -1.02
HMGN1P16-201ENST00000508308 DLEC1Q9Y238 1755 aa8.67□□□□□ -1.02
HMGN1P16-201ENST00000508308 SERPINB2P05120 415 aa8.66□□□□□ -1.02
HMGN1P16-201ENST00000508308 PRKAR2BP31323 418 aa8.66□□□□□ -1.02
HMGN1P16-201ENST00000508308 GAS2L2Q8NHY3 880 aa8.66□□□□□ -1.02
HMGN1P16-201ENST00000508308 SCN7AQ01118 1682 aa8.65□□□□□ -1.02
HMGN1P16-201ENST00000508308 PRAMEF22A3QJZ6 481 aa8.65□□□□□ -1.02
HMGN1P16-201ENST00000508308 STARD3NLO95772 234 aa8.65□□□□□ -1.02
HMGN1P16-201ENST00000508308 A1BGP04217 495 aa8.65□□□□□ -1.02
HMGN1P16-201ENST00000508308 TEFQ10587 303 aa8.65□□□□□ -1.02
HMGN1P16-201ENST00000508308 TBC1D9BQ66K14 1250 aa8.65□□□□□ -1.02
HMGN1P16-201ENST00000508308 TBC1D2BQ9UPU7 963 aa8.65□□□□□ -1.02
HMGN1P16-201ENST00000508308 COL11A2P13942 1736 aaPredicted RBP8.64□□□□□ -1.03
HMGN1P16-201ENST00000508308 TOMM70O94826 608 aa8.64□□□□□ -1.03
HMGN1P16-201ENST00000508308 CAMTA2O94983 1202 aa8.64□□□□□ -1.03
HMGN1P16-201ENST00000508308 TIE1P35590 1138 aa8.64□□□□□ -1.03
HMGN1P16-201ENST00000508308 IL6STP40189 918 aaPredicted RBP8.64□□□□□ -1.03
HMGN1P16-201ENST00000508308 RASSF7Q02833 373 aa8.64□□□□□ -1.03
HMGN1P16-201ENST00000508308 BICDL1Q6ZP65 573 aa8.64□□□□□ -1.03
HMGN1P16-201ENST00000508308 MCM10Q7L590 875 aa8.64□□□□□ -1.03
HMGN1P16-201ENST00000508308 TTC5Q8N0Z6 440 aa8.64□□□□□ -1.03
HMGN1P16-201ENST00000508308 USP16Q9Y5T5 823 aa8.64□□□□□ -1.03
HMGN1P16-201ENST00000508308 BTBD11A6QL63 1104 aa8.63□□□□□ -1.03
HMGN1P16-201ENST00000508308 PIP4K2AP48426 406 aaPredicted RBP8.63□□□□□ -1.03
HMGN1P16-201ENST00000508308 DCTN1Q14203 1278 aa8.63□□□□□ -1.03
HMGN1P16-201ENST00000508308 PRR5LQ6MZQ0 368 aa8.63□□□□□ -1.03
HMGN1P16-201ENST00000508308 C2CD5Q86YS7 1000 aa8.63□□□□□ -1.03
HMGN1P16-201ENST00000508308 CCDC24Q8N4L8 307 aa8.63□□□□□ -1.03
HMGN1P16-201ENST00000508308 DNAJC5GQ8N7S2 189 aa8.63□□□□□ -1.03
HMGN1P16-201ENST00000508308 FMNL2Q96PY5 1086 aa8.63□□□□□ -1.03
HMGN1P16-201ENST00000508308 TEX13AQ9BXU3 409 aaPredicted RBP8.63□□□□□ -1.03
HMGN1P16-201ENST00000508308 RNF181Q9P0P0 153 aa8.63□□□□□ -1.03
HMGN1P16-201ENST00000508308 TRPC6Q9Y210 931 aa8.63□□□□□ -1.03
HMGN1P16-201ENST00000508308 CCDC88AQ3V6T2 1871 aa8.63□□□□□ -1.03
HMGN1P16-201ENST00000508308 BCORQ6W2J9 1755 aa8.63□□□□□ -1.03
HMGN1P16-201ENST00000508308 A0A087WZG4 1122 aa8.62□□□□□ -1.03
HMGN1P16-201ENST00000508308 NBPF26B4DH59 902 aa8.62□□□□□ -1.03
HMGN1P16-201ENST00000508308 NFKBIEO00221 500 aa8.62□□□□□ -1.03
HMGN1P16-201ENST00000508308 SNPHO15079 494 aa8.62□□□□□ -1.03
HMGN1P16-201ENST00000508308 U2AF1L5P0DN76 240 aaPredicted RBP8.62□□□□□ -1.03
HMGN1P16-201ENST00000508308 U2AF1Q01081 240 aaKnown RBP eCLIP8.62□□□□□ -1.03
HMGN1P16-201ENST00000508308 NBPF10Q6P3W6 841 aaKnown RBP8.62□□□□□ -1.03
HMGN1P16-201ENST00000508308 NBPF15Q8N660 670 aa8.62□□□□□ -1.03
HMGN1P16-201ENST00000508308 CFAP53Q96M91 514 aa8.62□□□□□ -1.03
HMGN1P16-201ENST00000508308 DLG5Q8TDM6 1919 aa8.62□□□□□ -1.03
HMGN1P16-201ENST00000508308 TTLL6Q8N841 843 aa8.61□□□□□ -1.03
HMGN1P16-201ENST00000508308 BRIP1Q9BX63 1249 aa8.61□□□□□ -1.03
HMGN1P16-201ENST00000508308 RRAGCQ9HB90 399 aa8.61□□□□□ -1.03
HMGN1P16-201ENST00000508308 ZNF330Q9Y3S2 320 aaPredicted RBP8.61□□□□□ -1.03
HMGN1P16-201ENST00000508308 FER1L6Q2WGJ9 1857 aa8.61□□□□□ -1.03
HMGN1P16-201ENST00000508308 SLX4Q8IY92 1834 aa8.61□□□□□ -1.03
HMGN1P16-201ENST00000508308 TNRC6CQ9HCJ0 1690 aaKnown RBP8.6□□□□□ -1.03
HMGN1P16-201ENST00000508308 H0YIN7 160 aa8.6□□□□□ -1.03
HMGN1P16-201ENST00000508308 SNRPA1P09661 255 aaKnown RBP8.6□□□□□ -1.03
HMGN1P16-201ENST00000508308 LMNB1P20700 586 aa8.6□□□□□ -1.03
HMGN1P16-201ENST00000508308 IER5LQ5T953 404 aa8.6□□□□□ -1.03
HMGN1P16-201ENST00000508308 RBM46Q8TBY0 533 aaKnown RBP8.6□□□□□ -1.03
HMGN1P16-201ENST00000508308 PLEKHF1Q96S99 279 aa8.6□□□□□ -1.03
HMGN1P16-201ENST00000508308 MIS18AQ9NYP9 233 aa8.6□□□□□ -1.03
HMGN1P16-201ENST00000508308 NUDCQ9Y266 331 aa8.6□□□□□ -1.03
HMGN1P16-201ENST00000508308 TIAM2Q8IVF5 1701 aa8.6□□□□□ -1.03
HMGN1P16-201ENST00000508308 DICER1Q9UPY3 1922 aaKnown RBP8.59□□□□□ -1.03
HMGN1P16-201ENST00000508308 POTECB2RU33 542 aa8.59□□□□□ -1.03
HMGN1P16-201ENST00000508308 HTATSF1O43719 755 aaKnown RBP8.59□□□□□ -1.03
HMGN1P16-201ENST00000508308 APLP1P51693 650 aa8.59□□□□□ -1.03
HMGN1P16-201ENST00000508308 HTRA3P83110 453 aa8.59□□□□□ -1.03
HMGN1P16-201ENST00000508308 DZIP3Q86Y13 1208 aaKnown RBP8.59□□□□□ -1.03
HMGN1P16-201ENST00000508308 KIF12Q96FN5 646 aa8.59□□□□□ -1.03
HMGN1P16-201ENST00000508308 WDR90Q96KV7 1748 aa8.59□□□□□ -1.03
HMGN1P16-201ENST00000508308 KDM3BQ7LBC6 1761 aa8.58□□□□□ -1.04
HMGN1P16-201ENST00000508308 KDM2BQ8NHM5 1336 aa8.58□□□□□ -1.04
HMGN1P16-201ENST00000508308 ZC3H4Q9UPT8 1303 aaKnown RBP8.58□□□□□ -1.04
HMGN1P16-201ENST00000508308 CACNA1SQ13698 1873 aa8.58□□□□□ -1.04
HMGN1P16-201ENST00000508308 C21orf2O43822 256 aa8.58□□□□□ -1.04
HMGN1P16-201ENST00000508308 SRGNP10124 158 aa8.58□□□□□ -1.04
HMGN1P16-201ENST00000508308 PDE6BP35913 854 aa8.58□□□□□ -1.04
HMGN1P16-201ENST00000508308 TAF7Q15545 349 aaPredicted RBP8.58□□□□□ -1.04
HMGN1P16-201ENST00000508308 CNBD1Q8NA66 436 aa8.58□□□□□ -1.04
HMGN1P16-201ENST00000508308 C7orf43Q8WVR3 580 aa8.58□□□□□ -1.04
HMGN1P16-201ENST00000508308 RTF1Q92541 710 aaKnown RBP8.58□□□□□ -1.04
HMGN1P16-201ENST00000508308 ZNF622Q969S3 477 aaKnown RBP eCLIP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms