RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 PSME1Q06323 249 aa10.37□□□□□ -0.75
TRAPPC13-209ENST00000508304 TPRNQ4KMQ1 711 aa10.37□□□□□ -0.75
TRAPPC13-209ENST00000508304 SLC9A9Q8IVB4 645 aa10.37□□□□□ -0.75
TRAPPC13-209ENST00000508304 KRTAP4-8Q9BYQ9 185 aa10.37□□□□□ -0.75
TRAPPC13-209ENST00000508304 COL9A3Q14050 684 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC13-209ENST00000508304 SPDYE3A6NKU9 549 aa10.35□□□□□ -0.75
TRAPPC13-209ENST00000508304 TNFRSF25Q93038 417 aa10.35□□□□□ -0.75
TRAPPC13-209ENST00000508304 SLC30A3Q99726 388 aa10.35□□□□□ -0.75
TRAPPC13-209ENST00000508304 SFSWAPQ12872 951 aaKnown RBP10.34□□□□□ -0.75
TRAPPC13-209ENST00000508304 TBCELQ5QJ74 424 aa10.34□□□□□ -0.75
TRAPPC13-209ENST00000508304 SH3PXD2AQ5TCZ1 1133 aa10.34□□□□□ -0.75
TRAPPC13-209ENST00000508304 TNS4Q8IZW8 715 aa10.34□□□□□ -0.75
TRAPPC13-209ENST00000508304 PRDM6Q9NQX0 595 aa10.34□□□□□ -0.75
TRAPPC13-209ENST00000508304 STARD13Q9Y3M8 1113 aa10.34□□□□□ -0.75
TRAPPC13-209ENST00000508304 SERTM1A2A2V5 107 aa10.33□□□□□ -0.76
TRAPPC13-209ENST00000508304 USP17L5A8MUK1 530 aa10.33□□□□□ -0.76
TRAPPC13-209ENST00000508304 RSPO4Q2I0M5 234 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC13-209ENST00000508304 PRRT3Q5FWE3 981 aa10.33□□□□□ -0.76
TRAPPC13-209ENST00000508304 DEPDC4Q8N2C3 294 aa10.33□□□□□ -0.76
TRAPPC13-209ENST00000508304 ZNF232Q9UNY5 417 aa10.33□□□□□ -0.76
TRAPPC13-209ENST00000508304 M0R082 166 aa10.32□□□□□ -0.76
TRAPPC13-209ENST00000508304 ZNF417Q8TAU3 575 aa10.32□□□□□ -0.76
TRAPPC13-209ENST00000508304 ZNF587Q96SQ5 575 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC13-209ENST00000508304 NEUROD4Q9HD90 331 aa10.32□□□□□ -0.76
TRAPPC13-209ENST00000508304 NKAPLQ5M9Q1 402 aa10.31□□□□□ -0.76
TRAPPC13-209ENST00000508304 POTEAQ6S8J7 498 aa10.31□□□□□ -0.76
TRAPPC13-209ENST00000508304 RHPN1Q8TCX5 695 aa10.31□□□□□ -0.76
TRAPPC13-209ENST00000508304 ZBTB7BO15156 539 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC13-209ENST00000508304 APBA3O96018 575 aa10.3□□□□□ -0.76
TRAPPC13-209ENST00000508304 ALBP02768 609 aa10.3□□□□□ -0.76
TRAPPC13-209ENST00000508304 SPEM2Q0P670 501 aa10.3□□□□□ -0.76
TRAPPC13-209ENST00000508304 ZMYM1Q5SVZ6 1142 aa10.3□□□□□ -0.76
TRAPPC13-209ENST00000508304 MICALL1Q8N3F8 863 aa10.3□□□□□ -0.76
TRAPPC13-209ENST00000508304 KIAA1024Q9UPX6 916 aa10.3□□□□□ -0.76
TRAPPC13-209ENST00000508304 HIRAP54198 1017 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC13-209ENST00000508304 PSMA6P60900 246 aaKnown RBP10.29□□□□□ -0.76
TRAPPC13-209ENST00000508304 C1orf53Q5VUE5 145 aa10.29□□□□□ -0.76
TRAPPC13-209ENST00000508304 TRIM50Q86XT4 487 aa10.29□□□□□ -0.76
TRAPPC13-209ENST00000508304 TPSG1Q9NRR2 321 aa10.29□□□□□ -0.76
TRAPPC13-209ENST00000508304 FAM229AH3BQW9 127 aa10.28□□□□□ -0.76
TRAPPC13-209ENST00000508304 NID1P14543 1247 aa10.28□□□□□ -0.76
TRAPPC13-209ENST00000508304 ADH7P40394 386 aa10.28□□□□□ -0.76
TRAPPC13-209ENST00000508304 KCNQ4P56696 695 aa10.28□□□□□ -0.76
TRAPPC13-209ENST00000508304 C8orf86Q6ZUL3 223 aa10.28□□□□□ -0.76
TRAPPC13-209ENST00000508304 TPCN2Q8NHX9 752 aa10.28□□□□□ -0.76
TRAPPC13-209ENST00000508304 C20orf204Q6ZNR8 217 aa10.27□□□□□ -0.77
TRAPPC13-209ENST00000508304 PLEKHM2Q8IWE5 1019 aa10.27□□□□□ -0.77
TRAPPC13-209ENST00000508304 TSPAN10Q9H1Z9 355 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC13-209ENST00000508304 BRD7Q9NPI1 651 aa10.27□□□□□ -0.77
TRAPPC13-209ENST00000508304 CLDN10P78369 228 aa10.26□□□□□ -0.77
TRAPPC13-209ENST00000508304 NEUROD1Q13562 356 aa10.26□□□□□ -0.77
TRAPPC13-209ENST00000508304 CCDC102BQ68D86 513 aa10.26□□□□□ -0.77
TRAPPC13-209ENST00000508304 RAB44Q7Z6P3 723 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC13-209ENST00000508304 WWC1Q8IX03 1113 aa10.26□□□□□ -0.77
TRAPPC13-209ENST00000508304 POM121Q96HA1 1249 aa10.26□□□□□ -0.77
TRAPPC13-209ENST00000508304 HSH2DQ96JZ2 352 aa10.26□□□□□ -0.77
TRAPPC13-209ENST00000508304 ATP1A2P50993 1020 aa10.25□□□□□ -0.77
TRAPPC13-209ENST00000508304 TYRO3Q06418 890 aa10.25□□□□□ -0.77
TRAPPC13-209ENST00000508304 TRIM28Q13263 835 aaKnown RBP10.25□□□□□ -0.77
TRAPPC13-209ENST00000508304 FOXD4L6Q3SYB3 417 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC13-209ENST00000508304 FOXD4L3Q6VB84 417 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC13-209ENST00000508304 ADAMTS19Q8TE59 1207 aa10.25□□□□□ -0.77
TRAPPC13-209ENST00000508304 CEP63Q96MT8 703 aa10.25□□□□□ -0.77
TRAPPC13-209ENST00000508304 PSMG3-AS1Q96PY0 264 aa10.25□□□□□ -0.77
TRAPPC13-209ENST00000508304 NACC1Q96RE7 527 aa10.25□□□□□ -0.77
TRAPPC13-209ENST00000508304 PHACTR1Q9C0D0 580 aa10.25□□□□□ -0.77
TRAPPC13-209ENST00000508304 ANKIB1Q9P2G1 1089 aa10.25□□□□□ -0.77
TRAPPC13-209ENST00000508304 HCN4Q9Y3Q4 1203 aa10.25□□□□□ -0.77
TRAPPC13-209ENST00000508304 USP17L3A6NCW0 530 aa10.24□□□□□ -0.77
TRAPPC13-209ENST00000508304 USP17L4A6NCW7 530 aa10.24□□□□□ -0.77
TRAPPC13-209ENST00000508304 M0R2N6 131 aa10.24□□□□□ -0.77
TRAPPC13-209ENST00000508304 DYRK3O43781 588 aa10.24□□□□□ -0.77
TRAPPC13-209ENST00000508304 USP17L2Q6R6M4 530 aa10.24□□□□□ -0.77
TRAPPC13-209ENST00000508304 USP17L1Q7RTZ2 530 aa10.24□□□□□ -0.77
TRAPPC13-209ENST00000508304 ZNF280CQ8ND82 737 aa10.23□□□□□ -0.77
TRAPPC13-209ENST00000508304 SUSD3Q96L08 255 aa10.23□□□□□ -0.77
TRAPPC13-209ENST00000508304 KCNH4Q9UQ05 1017 aa10.23□□□□□ -0.77
TRAPPC13-209ENST00000508304 CHMP3Q9Y3E7 222 aa10.23□□□□□ -0.77
TRAPPC13-209ENST00000508304 POM121CA8CG34 1229 aa10.22□□□□□ -0.77
TRAPPC13-209ENST00000508304 SFI1A8K8P3 1242 aa10.22□□□□□ -0.77
TRAPPC13-209ENST00000508304 GRIK4Q16099 956 aa10.22□□□□□ -0.77
TRAPPC13-209ENST00000508304 UCN2Q96RP3 112 aa10.22□□□□□ -0.77
TRAPPC13-209ENST00000508304 LARGE2Q8N3Y3 721 aa10.21□□□□□ -0.77
TRAPPC13-209ENST00000508304 SIX5Q8N196 739 aa10.2□□□□□ -0.78
TRAPPC13-209ENST00000508304 OGFOD1Q8N543 542 aa10.2□□□□□ -0.78
TRAPPC13-209ENST00000508304 PALM3A6NDB9 673 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC13-209ENST00000508304 C21orf2O43822 256 aa10.19□□□□□ -0.78
TRAPPC13-209ENST00000508304 ATP9BO43861 1147 aa10.19□□□□□ -0.78
TRAPPC13-209ENST00000508304 DKK1O94907 266 aa10.19□□□□□ -0.78
TRAPPC13-209ENST00000508304 LILRB5O75023 590 aa10.18□□□□□ -0.78
TRAPPC13-209ENST00000508304 TSEN2Q8NCE0 465 aaKnown RBP10.18□□□□□ -0.78
TRAPPC13-209ENST00000508304 BHMTQ93088 406 aa10.18□□□□□ -0.78
TRAPPC13-209ENST00000508304 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC13-209ENST00000508304 C9orf172C9J069 976 aa10.17□□□□□ -0.78
TRAPPC13-209ENST00000508304 RAD21O60216 631 aa10.17□□□□□ -0.78
TRAPPC13-209ENST00000508304 PPP1R12BO60237 982 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC13-209ENST00000508304 SELPP16109 830 aa10.17□□□□□ -0.78
TRAPPC13-209ENST00000508304 ADGRE1Q14246 886 aa10.17□□□□□ -0.78
TRAPPC13-209ENST00000508304 TRAPPC3LQ5T215 181 aa10.17□□□□□ -0.78
TRAPPC13-209ENST00000508304 ALDH16A1Q8IZ83 802 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms