RNA–Protein interactions for RNA: ENST00000507516.3

COL6A4P2-203, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 5

Gene COL6A4P2, Length 738 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-203ENST00000507516 ZNF541Q9H0D2 1346 aa12.83□□□□□ -0.36
COL6A4P2-203ENST00000507516 CENPBP07199 599 aaPredicted RBP12.82□□□□□ -0.36
COL6A4P2-203ENST00000507516 RGS19P49795 217 aa12.82□□□□□ -0.36
COL6A4P2-203ENST00000507516 CCDC93Q567U6 631 aa12.82□□□□□ -0.36
COL6A4P2-203ENST00000507516 MAP1SQ66K74 1059 aaPredicted RBP12.82□□□□□ -0.36
COL6A4P2-203ENST00000507516 PNMA8AQ86V59 439 aaPredicted RBP12.82□□□□□ -0.36
COL6A4P2-203ENST00000507516 MORC1Q86VD1 984 aa12.82□□□□□ -0.36
COL6A4P2-203ENST00000507516 TTC5Q8N0Z6 440 aa12.82□□□□□ -0.36
COL6A4P2-203ENST00000507516 SETDB2Q96T68 719 aa12.82□□□□□ -0.36
COL6A4P2-203ENST00000507516 TBC1D2BQ9UPU7 963 aa12.82□□□□□ -0.36
COL6A4P2-203ENST00000507516 BEGAINQ9BUH8 593 aa12.81□□□□□ -0.36
COL6A4P2-203ENST00000507516 IL6STP40189 918 aaPredicted RBP12.8□□□□□ -0.36
COL6A4P2-203ENST00000507516 FKBP4Q02790 459 aaKnown RBP eCLIP12.8□□□□□ -0.36
COL6A4P2-203ENST00000507516 NPM2Q86SE8 214 aaKnown RBP12.8□□□□□ -0.36
COL6A4P2-203ENST00000507516 C7orf43Q8WVR3 580 aa12.8□□□□□ -0.36
COL6A4P2-203ENST00000507516 PANK3Q9H999 370 aa12.8□□□□□ -0.36
COL6A4P2-203ENST00000507516 ZNF277Q9NRM2 450 aaPredicted RBP12.8□□□□□ -0.36
COL6A4P2-203ENST00000507516 RNF123Q5XPI4 1314 aa12.8□□□□□ -0.36
COL6A4P2-203ENST00000507516 FER1L6Q2WGJ9 1857 aa12.8□□□□□ -0.36
COL6A4P2-203ENST00000507516 COL11A2P13942 1736 aaPredicted RBP12.79□□□□□ -0.36
COL6A4P2-203ENST00000507516 PAXIP1Q6ZW49 1069 aaPredicted RBP12.79□□□□□ -0.36
COL6A4P2-203ENST00000507516 TEX13AQ9BXU3 409 aaPredicted RBP12.79□□□□□ -0.36
COL6A4P2-203ENST00000507516 SCN11AQ9UI33 1791 aa12.79□□□□□ -0.36
COL6A4P2-203ENST00000507516 CCDC88AQ3V6T2 1871 aa12.78□□□□□ -0.36
COL6A4P2-203ENST00000507516 ANKRD31Q8N7Z5 1873 aa12.78□□□□□ -0.36
COL6A4P2-203ENST00000507516 CAMTA2O94983 1202 aa12.78□□□□□ -0.36
COL6A4P2-203ENST00000507516 HMOX1P09601 288 aa12.78□□□□□ -0.36
COL6A4P2-203ENST00000507516 NPR1P16066 1061 aa12.78□□□□□ -0.36
COL6A4P2-203ENST00000507516 ECE1P42892 770 aa12.78□□□□□ -0.36
COL6A4P2-203ENST00000507516 MTHFSDQ2M296 383 aaKnown RBP12.78□□□□□ -0.36
COL6A4P2-203ENST00000507516 ZNF496Q96IT1 587 aaPredicted RBP12.78□□□□□ -0.36
COL6A4P2-203ENST00000507516 CAPNS2Q96L46 248 aa12.78□□□□□ -0.36
COL6A4P2-203ENST00000507516 DDX21Q9NR30 783 aaKnown RBP eCLIP12.78□□□□□ -0.36
COL6A4P2-203ENST00000507516 GRM1Q13255 1194 aa12.77□□□□□ -0.37
COL6A4P2-203ENST00000507516 NBPF5PQ86XG9 351 aaPredicted RBP12.77□□□□□ -0.37
COL6A4P2-203ENST00000507516 RTKN2Q8IZC4 609 aa12.77□□□□□ -0.37
COL6A4P2-203ENST00000507516 CFAP44Q96MT7 982 aa12.77□□□□□ -0.37
COL6A4P2-203ENST00000507516 GPR101Q96P66 508 aaPredicted RBP12.77□□□□□ -0.37
COL6A4P2-203ENST00000507516 DICER1Q9UPY3 1922 aaKnown RBP12.77□□□□□ -0.37
COL6A4P2-203ENST00000507516 HEG1Q9ULI3 1381 aa12.77□□□□□ -0.37
COL6A4P2-203ENST00000507516 SCN4AP35499 1836 aa12.76□□□□□ -0.37
COL6A4P2-203ENST00000507516 FZD9O00144 591 aa12.76□□□□□ -0.37
COL6A4P2-203ENST00000507516 A1BGP04217 495 aa12.76□□□□□ -0.37
COL6A4P2-203ENST00000507516 IARSP41252 1262 aaKnown RBP12.76□□□□□ -0.37
COL6A4P2-203ENST00000507516 ZNF790Q6PG37 636 aa12.76□□□□□ -0.37
COL6A4P2-203ENST00000507516 GPC2Q8N158 579 aa12.76□□□□□ -0.37
COL6A4P2-203ENST00000507516 SCN7AQ01118 1682 aa12.76□□□□□ -0.37
COL6A4P2-203ENST00000507516 VIRMAQ69YN4 1812 aaKnown RBP12.76□□□□□ -0.37
COL6A4P2-203ENST00000507516 TEFQ10587 303 aa12.75□□□□□ -0.37
COL6A4P2-203ENST00000507516 CYP4F22Q6NT55 531 aa12.75□□□□□ -0.37
COL6A4P2-203ENST00000507516 OLFM4Q6UX06 510 aa12.75□□□□□ -0.37
COL6A4P2-203ENST00000507516 DZIP3Q86Y13 1208 aaKnown RBP12.75□□□□□ -0.37
COL6A4P2-203ENST00000507516 SLX4Q8IY92 1834 aa12.75□□□□□ -0.37
COL6A4P2-203ENST00000507516 ADAMTSL1Q8N6G6 1762 aa12.75□□□□□ -0.37
COL6A4P2-203ENST00000507516 TSKSQ9UJT2 592 aa12.75□□□□□ -0.37
COL6A4P2-203ENST00000507516 LMOD1P29536 600 aaPredicted RBP12.74□□□□□ -0.37
COL6A4P2-203ENST00000507516 SYNE4Q8N205 404 aa12.74□□□□□ -0.37
COL6A4P2-203ENST00000507516 JDP2Q8WYK2 163 aa12.74□□□□□ -0.37
COL6A4P2-203ENST00000507516 FMNL2Q96PY5 1086 aa12.74□□□□□ -0.37
COL6A4P2-203ENST00000507516 KLRG2A4D1S0 409 aaPredicted RBP12.73□□□□□ -0.37
COL6A4P2-203ENST00000507516 EIF6P56537 245 aaKnown RBP12.73□□□□□ -0.37
COL6A4P2-203ENST00000507516 FMR1Q06787 632 aaKnown RBP eCLIP12.73□□□□□ -0.37
COL6A4P2-203ENST00000507516 CLEC4GQ6UXB4 293 aa12.73□□□□□ -0.37
COL6A4P2-203ENST00000507516 MCOLN1Q9GZU1 580 aa12.73□□□□□ -0.37
COL6A4P2-203ENST00000507516 GJA3Q9Y6H8 435 aa12.73□□□□□ -0.37
COL6A4P2-203ENST00000507516 CA12O43570 354 aa12.72□□□□□ -0.37
COL6A4P2-203ENST00000507516 MAP2K2P36507 400 aa12.72□□□□□ -0.37
COL6A4P2-203ENST00000507516 TPTE2Q6XPS3 522 aa12.72□□□□□ -0.37
COL6A4P2-203ENST00000507516 ZNF652Q9Y2D9 606 aa12.72□□□□□ -0.37
COL6A4P2-203ENST00000507516 KNSTRNQ9Y448 316 aa12.72□□□□□ -0.37
COL6A4P2-203ENST00000507516 TLL2Q9Y6L7 1015 aa12.72□□□□□ -0.37
COL6A4P2-203ENST00000507516 THSD7BQ9C0I4 1608 aa12.72□□□□□ -0.37
COL6A4P2-203ENST00000507516 UBR2Q8IWV8 1755 aa12.71□□□□□ -0.37
COL6A4P2-203ENST00000507516 TRAF5O00463 557 aa12.71□□□□□ -0.37
COL6A4P2-203ENST00000507516 AOC2O75106 756 aa12.71□□□□□ -0.37
COL6A4P2-203ENST00000507516 ALDH1B1P30837 517 aa12.71□□□□□ -0.37
COL6A4P2-203ENST00000507516 CST9Q5W186 159 aa12.71□□□□□ -0.37
COL6A4P2-203ENST00000507516 IL17REQ8NFR9 667 aa12.71□□□□□ -0.37
COL6A4P2-203ENST00000507516 PSMD1Q99460 953 aa12.71□□□□□ -0.37
COL6A4P2-203ENST00000507516 GNAT3A8MTJ3 354 aa12.7□□□□□ -0.38
COL6A4P2-203ENST00000507516 EPS15P42566 896 aa12.7□□□□□ -0.38
COL6A4P2-203ENST00000507516 PIP4K2AP48426 406 aaPredicted RBP12.7□□□□□ -0.38
COL6A4P2-203ENST00000507516 SCNN1DP51172 638 aa12.7□□□□□ -0.38
COL6A4P2-203ENST00000507516 USP50Q70EL3 339 aaPredicted RBP12.7□□□□□ -0.38
COL6A4P2-203ENST00000507516 NIP7Q9Y221 180 aaKnown RBP eCLIP12.7□□□□□ -0.38
COL6A4P2-203ENST00000507516 ARFGEF2Q9Y6D5 1785 aa12.69□□□□□ -0.38
COL6A4P2-203ENST00000507516 FAM177BA6PVY3 158 aa12.69□□□□□ -0.38
COL6A4P2-203ENST00000507516 DIAPH1O60610 1272 aaKnown RBP12.69□□□□□ -0.38
COL6A4P2-203ENST00000507516 DGKZQ13574 1117 aa12.69□□□□□ -0.38
COL6A4P2-203ENST00000507516 GAS2L2Q8NHY3 880 aa12.69□□□□□ -0.38
COL6A4P2-203ENST00000507516 KCNQ3O43525 872 aa12.68□□□□□ -0.38
COL6A4P2-203ENST00000507516 GTF2E1P29083 439 aaPredicted RBP12.68□□□□□ -0.38
COL6A4P2-203ENST00000507516 BRPF1P55201 1214 aaPredicted RBP12.68□□□□□ -0.38
COL6A4P2-203ENST00000507516 CC2D2BQ6DHV5 1058 aa12.68□□□□□ -0.38
COL6A4P2-203ENST00000507516 SAPCD2Q86UD0 394 aa12.68□□□□□ -0.38
COL6A4P2-203ENST00000507516 USP16Q9Y5T5 823 aa12.68□□□□□ -0.38
COL6A4P2-203ENST00000507516 BTBD11A6QL63 1104 aa12.67□□□□□ -0.38
COL6A4P2-203ENST00000507516 RGL2O15211 777 aa12.67□□□□□ -0.38
COL6A4P2-203ENST00000507516 EIF4G2P78344 907 aaKnown RBP eCLIP12.67□□□□□ -0.38
COL6A4P2-203ENST00000507516 AMER1Q5JTC6 1135 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms