RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 CFAP53Q96M91 514 aa7.48□□□□□ -1.21
CLDND1-213ENST00000506927 PNNQ9H307 717 aaKnown RBP7.48□□□□□ -1.21
CLDND1-213ENST00000506927 ADAMTS8Q9UP79 889 aa7.48□□□□□ -1.21
CLDND1-213ENST00000506927 ZNF330Q9Y3S2 320 aaPredicted RBP7.48□□□□□ -1.21
CLDND1-213ENST00000506927 UHRF1BP1LA0JNW5 1464 aa7.48□□□□□ -1.21
CLDND1-213ENST00000506927 KDM2BQ8NHM5 1336 aa7.48□□□□□ -1.21
CLDND1-213ENST00000506927 KDM5AP29375 1690 aaKnown RBP7.47□□□□□ -1.21
CLDND1-213ENST00000506927 IQGAP1P46940 1657 aa7.47□□□□□ -1.21
CLDND1-213ENST00000506927 CEP152O94986 1710 aa7.47□□□□□ -1.21
CLDND1-213ENST00000506927 TTC37Q6PGP7 1564 aa7.47□□□□□ -1.21
CLDND1-213ENST00000506927 DHX9Q08211 1270 aaKnown RBP7.47□□□□□ -1.21
CLDND1-213ENST00000506927 VAC14Q08AM6 782 aa7.47□□□□□ -1.21
CLDND1-213ENST00000506927 SPAG9O60271 1321 aaKnown RBP7.47□□□□□ -1.21
CLDND1-213ENST00000506927 SPHKAPQ2M3C7 1700 aa7.47□□□□□ -1.21
CLDND1-213ENST00000506927 DISP3Q9P2K9 1392 aa7.46□□□□□ -1.21
CLDND1-213ENST00000506927 SBNO2Q9Y2G9 1366 aa7.46□□□□□ -1.21
CLDND1-213ENST00000506927 PTPRTO14522 1441 aa7.46□□□□□ -1.21
CLDND1-213ENST00000506927 ERVH48-1M5A8F1 160 aa7.46□□□□□ -1.22
CLDND1-213ENST00000506927 PTMSP20962 102 aa7.46□□□□□ -1.22
CLDND1-213ENST00000506927 MCCD1P59942 119 aaPredicted RBP7.46□□□□□ -1.22
CLDND1-213ENST00000506927 NBPF1Q3BBV0 1214 aa7.46□□□□□ -1.22
CLDND1-213ENST00000506927 DUSP27Q5VZP5 1158 aa7.46□□□□□ -1.22
CLDND1-213ENST00000506927 TRMT2AQ8IZ69 625 aaKnown RBP7.46□□□□□ -1.22
CLDND1-213ENST00000506927 TMPRSS4Q9NRS4 437 aa7.46□□□□□ -1.22
CLDND1-213ENST00000506927 PGPEP1Q9NXJ5 209 aa7.46□□□□□ -1.22
CLDND1-213ENST00000506927 PLA2R1Q13018 1463 aa7.46□□□□□ -1.22
CLDND1-213ENST00000506927 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.46□□□□□ -1.22
CLDND1-213ENST00000506927 ZNF521Q96K83 1311 aa7.46□□□□□ -1.22
CLDND1-213ENST00000506927 TET3O43151 1660 aa7.45□□□□□ -1.22
CLDND1-213ENST00000506927 MYOM2P54296 1465 aa7.45□□□□□ -1.22
CLDND1-213ENST00000506927 RAD21O60216 631 aa7.45□□□□□ -1.22
CLDND1-213ENST00000506927 CBLBQ13191 982 aa7.45□□□□□ -1.22
CLDND1-213ENST00000506927 MRPL14Q6P1L8 145 aaKnown RBP7.45□□□□□ -1.22
CLDND1-213ENST00000506927 WDR63Q8IWG1 891 aa7.45□□□□□ -1.22
CLDND1-213ENST00000506927 SEPT12Q8IYM1 358 aa7.45□□□□□ -1.22
CLDND1-213ENST00000506927 RWDD1Q9H446 243 aaPredicted RBP7.45□□□□□ -1.22
CLDND1-213ENST00000506927 RPGRIP1LQ68CZ1 1315 aa7.45□□□□□ -1.22
CLDND1-213ENST00000506927 CENPJQ9HC77 1338 aaPredicted RBP7.45□□□□□ -1.22
CLDND1-213ENST00000506927 POLR3AO14802 1390 aaPredicted RBP7.45□□□□□ -1.22
CLDND1-213ENST00000506927 MADDQ8WXG6 1647 aa7.45□□□□□ -1.22
CLDND1-213ENST00000506927 WASHC4Q2M389 1173 aa7.44□□□□□ -1.22
CLDND1-213ENST00000506927 MEIOBQ8N635 442 aa7.44□□□□□ -1.22
CLDND1-213ENST00000506927 ZNF592Q92610 1267 aa7.44□□□□□ -1.22
CLDND1-213ENST00000506927 ZFP42Q96MM3 310 aa7.44□□□□□ -1.22
CLDND1-213ENST00000506927 MYH16Q9H6N6 1097 aa7.44□□□□□ -1.22
CLDND1-213ENST00000506927 SENP2Q9HC62 589 aa7.44□□□□□ -1.22
CLDND1-213ENST00000506927 CEP126Q9P2H0 1117 aa7.44□□□□□ -1.22
CLDND1-213ENST00000506927 ISY1Q9ULR0 285 aaKnown RBP7.44□□□□□ -1.22
CLDND1-213ENST00000506927 NSD2O96028 1365 aa7.44□□□□□ -1.22
CLDND1-213ENST00000506927 ABCC1P33527 1531 aa7.43□□□□□ -1.22
CLDND1-213ENST00000506927 SNRPBP14678 240 aaKnown RBP7.43□□□□□ -1.22
CLDND1-213ENST00000506927 NFKBIBQ15653 356 aa7.43□□□□□ -1.22
CLDND1-213ENST00000506927 CCDC27Q2M243 656 aa7.43□□□□□ -1.22
CLDND1-213ENST00000506927 ZNF784Q8NCA9 323 aaPredicted RBP7.43□□□□□ -1.22
CLDND1-213ENST00000506927 TRIM47Q96LD4 638 aa7.43□□□□□ -1.22
CLDND1-213ENST00000506927 PURBQ96QR8 312 aaKnown RBP7.43□□□□□ -1.22
CLDND1-213ENST00000506927 DEPDC5O75140 1603 aa7.42□□□□□ -1.22
CLDND1-213ENST00000506927 SCARF1Q14162 830 aa7.42□□□□□ -1.22
CLDND1-213ENST00000506927 C6orf118Q5T5N4 469 aa7.42□□□□□ -1.22
CLDND1-213ENST00000506927 RNF20Q5VTR2 975 aa7.42□□□□□ -1.22
CLDND1-213ENST00000506927 Q6ZVU0 165 aa7.42□□□□□ -1.22
CLDND1-213ENST00000506927 CLUAP1Q96AJ1 413 aa7.42□□□□□ -1.22
CLDND1-213ENST00000506927 RUNDC1Q96C34 613 aa7.42□□□□□ -1.22
CLDND1-213ENST00000506927 LAS1LQ9Y4W2 734 aaKnown RBP7.42□□□□□ -1.22
CLDND1-213ENST00000506927 KIF1BO60333 1816 aa7.42□□□□□ -1.22
CLDND1-213ENST00000506927 SETBP1Q9Y6X0 1596 aa7.42□□□□□ -1.22
CLDND1-213ENST00000506927 PLIN1O60240 522 aa7.41□□□□□ -1.22
CLDND1-213ENST00000506927 LILRA1O75019 489 aa7.41□□□□□ -1.22
CLDND1-213ENST00000506927 ADD1P35611 737 aaKnown RBP7.41□□□□□ -1.22
CLDND1-213ENST00000506927 LINC00528Q8N1L1 170 aa7.41□□□□□ -1.22
CLDND1-213ENST00000506927 KIFC2Q96AC6 838 aa7.41□□□□□ -1.22
CLDND1-213ENST00000506927 ZNF775Q96BV0 537 aaPredicted RBP7.41□□□□□ -1.22
CLDND1-213ENST00000506927 UPP2O95045 317 aa7.4□□□□□ -1.22
CLDND1-213ENST00000506927 BMP2P12643 396 aa7.4□□□□□ -1.22
CLDND1-213ENST00000506927 C8orf34Q49A92 452 aa7.4□□□□□ -1.22
CLDND1-213ENST00000506927 MORC1Q86VD1 984 aa7.4□□□□□ -1.22
CLDND1-213ENST00000506927 WWC1Q8IX03 1113 aa7.4□□□□□ -1.22
CLDND1-213ENST00000506927 FAM43AQ8N2R8 423 aa7.4□□□□□ -1.22
CLDND1-213ENST00000506927 ZNF428Q96B54 188 aa7.4□□□□□ -1.22
CLDND1-213ENST00000506927 TSEN34Q9BSV6 310 aaKnown RBP7.4□□□□□ -1.22
CLDND1-213ENST00000506927 CYLDQ9NQC7 956 aa7.4□□□□□ -1.22
CLDND1-213ENST00000506927 ADGRL1O94910 1474 aa7.4□□□□□ -1.22
CLDND1-213ENST00000506927 VIRMAQ69YN4 1812 aaKnown RBP7.4□□□□□ -1.23
CLDND1-213ENST00000506927 MYO3AQ8NEV4 1616 aa7.39□□□□□ -1.23
CLDND1-213ENST00000506927 MAP3K4Q9Y6R4 1608 aa7.39□□□□□ -1.23
CLDND1-213ENST00000506927 FANCAO15360 1455 aa7.39□□□□□ -1.23
CLDND1-213ENST00000506927 APAF1O14727 1248 aa7.39□□□□□ -1.23
CLDND1-213ENST00000506927 IPO8O15397 1037 aaKnown RBP7.39□□□□□ -1.23
CLDND1-213ENST00000506927 CCDC125Q86Z20 511 aa7.39□□□□□ -1.23
CLDND1-213ENST00000506927 AGBL1Q96MI9 1066 aa7.39□□□□□ -1.23
CLDND1-213ENST00000506927 PCDHB11Q9Y5F2 797 aa7.39□□□□□ -1.23
CLDND1-213ENST00000506927 USP32Q8NFA0 1604 aa7.38□□□□□ -1.23
CLDND1-213ENST00000506927 PLEKHH1Q9ULM0 1364 aa7.38□□□□□ -1.23
CLDND1-213ENST00000506927 CALD1Q05682 793 aaKnown RBP7.38□□□□□ -1.23
CLDND1-213ENST00000506927 SEMA3FQ13275 785 aa7.38□□□□□ -1.23
CLDND1-213ENST00000506927 TSGA10IPQ3SY00 556 aa7.38□□□□□ -1.23
CLDND1-213ENST00000506927 PHTF2Q8N3S3 785 aa7.38□□□□□ -1.23
CLDND1-213ENST00000506927 CCDC85AQ96PX6 553 aaPredicted RBP7.38□□□□□ -1.23
CLDND1-213ENST00000506927 ZCCHC11Q5TAX3 1644 aaKnown RBP7.38□□□□□ -1.23
CLDND1-213ENST00000506927 VWDEQ8N2E2 1590 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms