RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 NBPF10Q6P3W6 841 aaKnown RBP10.83□□□□□ -0.68
PDGFC-205ENST00000506880 GIGYF2Q6Y7W6 1299 aaKnown RBP10.83□□□□□ -0.68
PDGFC-205ENST00000506880 NBPF15Q8N660 670 aa10.83□□□□□ -0.68
PDGFC-205ENST00000506880 ARHGAP45Q92619 1136 aa10.83□□□□□ -0.68
PDGFC-205ENST00000506880 NYXQ9GZU5 481 aa10.83□□□□□ -0.68
PDGFC-205ENST00000506880 PXDNLA1KZ92 1463 aa10.82□□□□□ -0.68
PDGFC-205ENST00000506880 CAMTA2O94983 1202 aa10.82□□□□□ -0.68
PDGFC-205ENST00000506880 EIF2S2P20042 333 aaKnown RBP10.82□□□□□ -0.68
PDGFC-205ENST00000506880 EXOSC9Q06265 439 aaKnown RBP10.82□□□□□ -0.68
PDGFC-205ENST00000506880 TSR2Q969E8 191 aaKnown RBP10.82□□□□□ -0.68
PDGFC-205ENST00000506880 SGIP1Q9BQI5 828 aa10.82□□□□□ -0.68
PDGFC-205ENST00000506880 N4BP2Q86UW6 1770 aaPredicted RBP10.82□□□□□ -0.68
PDGFC-205ENST00000506880 ARFGEF2Q9Y6D5 1785 aa10.81□□□□□ -0.68
PDGFC-205ENST00000506880 IPO8O15397 1037 aaKnown RBP10.81□□□□□ -0.68
PDGFC-205ENST00000506880 TM4SF1P30408 202 aa10.81□□□□□ -0.68
PDGFC-205ENST00000506880 KCNQ4P56696 695 aa10.81□□□□□ -0.68
PDGFC-205ENST00000506880 C1QBPQ07021 282 aaKnown RBP10.81□□□□□ -0.68
PDGFC-205ENST00000506880 ANKRD13DQ6ZTN6 518 aa10.81□□□□□ -0.68
PDGFC-205ENST00000506880 SETDB2Q96T68 719 aa10.81□□□□□ -0.68
PDGFC-205ENST00000506880 CHPF2Q9P2E5 772 aa10.81□□□□□ -0.68
PDGFC-205ENST00000506880 CD2APQ9Y5K6 639 aa10.81□□□□□ -0.68
PDGFC-205ENST00000506880 NPM3O75607 178 aaKnown RBP10.8□□□□□ -0.68
PDGFC-205ENST00000506880 MS4A1P11836 297 aa10.8□□□□□ -0.68
PDGFC-205ENST00000506880 NEXNQ0ZGT2 675 aa10.8□□□□□ -0.68
PDGFC-205ENST00000506880 KSR2Q6VAB6 950 aa10.8□□□□□ -0.68
PDGFC-205ENST00000506880 PPP1R42Q7Z4L9 355 aa10.8□□□□□ -0.68
PDGFC-205ENST00000506880 TSPYL6Q8N831 410 aa10.8□□□□□ -0.68
PDGFC-205ENST00000506880 SPINK5Q9NQ38 1064 aaPredicted RBP10.8□□□□□ -0.68
PDGFC-205ENST00000506880 HDAC5Q9UQL6 1122 aa10.8□□□□□ -0.68
PDGFC-205ENST00000506880 SALL2Q9Y467 1007 aaPredicted RBP10.8□□□□□ -0.68
PDGFC-205ENST00000506880 PARP3Q9Y6F1 533 aa10.8□□□□□ -0.68
PDGFC-205ENST00000506880 PRAMEF22A3QJZ6 481 aa10.79□□□□□ -0.68
PDGFC-205ENST00000506880 PHF14O94880 888 aa10.79□□□□□ -0.68
PDGFC-205ENST00000506880 SLC4A2P04920 1241 aa10.79□□□□□ -0.68
PDGFC-205ENST00000506880 FLIIQ13045 1269 aa10.79□□□□□ -0.68
PDGFC-205ENST00000506880 TCIRG1Q13488 830 aa10.79□□□□□ -0.68
PDGFC-205ENST00000506880 TPTE2Q6XPS3 522 aa10.79□□□□□ -0.68
PDGFC-205ENST00000506880 COPS6Q7L5N1 327 aa10.79□□□□□ -0.68
PDGFC-205ENST00000506880 CCDC191Q8NCU4 936 aa10.79□□□□□ -0.68
PDGFC-205ENST00000506880 AFDNP55196 1824 aaKnown RBP10.79□□□□□ -0.68
PDGFC-205ENST00000506880 PTGER2P43116 358 aa10.78□□□□□ -0.68
PDGFC-205ENST00000506880 TGFB2P61812 414 aa10.78□□□□□ -0.68
PDGFC-205ENST00000506880 USPL1Q5W0Q7 1092 aa10.78□□□□□ -0.68
PDGFC-205ENST00000506880 ZNF34Q8IZ26 560 aa10.78□□□□□ -0.68
PDGFC-205ENST00000506880 XAGE3Q8WTP9 111 aa10.78□□□□□ -0.68
PDGFC-205ENST00000506880 C10orf71Q711Q0 1435 aa10.77□□□□□ -0.68
PDGFC-205ENST00000506880 PSDA5PKW4 1024 aaPredicted RBP10.77□□□□□ -0.69
PDGFC-205ENST00000506880 MYL6BP14649 208 aa10.77□□□□□ -0.69
PDGFC-205ENST00000506880 RARSP54136 660 aaKnown RBP10.77□□□□□ -0.69
PDGFC-205ENST00000506880 KRT24Q2M2I5 525 aa10.77□□□□□ -0.69
PDGFC-205ENST00000506880 RIC3Q7Z5B4 369 aa10.77□□□□□ -0.69
PDGFC-205ENST00000506880 CDCA7LQ96GN5 454 aa10.77□□□□□ -0.69
PDGFC-205ENST00000506880 ARXQ96QS3 562 aa10.77□□□□□ -0.69
PDGFC-205ENST00000506880 METTL22Q9BUU2 404 aaPredicted RBP10.77□□□□□ -0.69
PDGFC-205ENST00000506880 API5Q9BZZ5 524 aaKnown RBP10.77□□□□□ -0.69
PDGFC-205ENST00000506880 BCL2L12Q9HB09 334 aa10.77□□□□□ -0.69
PDGFC-205ENST00000506880 LAMB2P55268 1798 aa10.77□□□□□ -0.69
PDGFC-205ENST00000506880 MYH3P11055 1940 aa10.76□□□□□ -0.69
PDGFC-205ENST00000506880 DLEC1Q9Y238 1755 aa10.76□□□□□ -0.69
PDGFC-205ENST00000506880 POLRMTO00411 1230 aaKnown RBP10.76□□□□□ -0.69
PDGFC-205ENST00000506880 ELL2O00472 640 aaPredicted RBP10.76□□□□□ -0.69
PDGFC-205ENST00000506880 ALDH1L1O75891 902 aa10.76□□□□□ -0.69
PDGFC-205ENST00000506880 MMP10P09238 476 aa10.76□□□□□ -0.69
PDGFC-205ENST00000506880 ST5P78524 1137 aa10.76□□□□□ -0.69
PDGFC-205ENST00000506880 FKBP8Q14318 412 aa10.76□□□□□ -0.69
PDGFC-205ENST00000506880 NFIXQ14938 502 aa10.76□□□□□ -0.69
PDGFC-205ENST00000506880 GRIPAP1Q4V328 841 aa10.76□□□□□ -0.69
PDGFC-205ENST00000506880 AMIGO3Q86WK7 504 aa10.76□□□□□ -0.69
PDGFC-205ENST00000506880 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.76□□□□□ -0.69
PDGFC-205ENST00000506880 LINS1Q8NG48 757 aa10.76□□□□□ -0.69
PDGFC-205ENST00000506880 ISCA1Q9BUE6 129 aa10.76□□□□□ -0.69
PDGFC-205ENST00000506880 BRIP1Q9BX63 1249 aa10.76□□□□□ -0.69
PDGFC-205ENST00000506880 CHMP4BQ9H444 224 aaKnown RBP10.76□□□□□ -0.69
PDGFC-205ENST00000506880 TBC1D2BQ9UPU7 963 aa10.76□□□□□ -0.69
PDGFC-205ENST00000506880 NIP7Q9Y221 180 aaKnown RBP eCLIP10.76□□□□□ -0.69
PDGFC-205ENST00000506880 KLRG2A4D1S0 409 aaPredicted RBP10.75□□□□□ -0.69
PDGFC-205ENST00000506880 PDE6BP35913 854 aa10.75□□□□□ -0.69
PDGFC-205ENST00000506880 FKBP5Q13451 457 aaPredicted RBP10.75□□□□□ -0.69
PDGFC-205ENST00000506880 PROSER3Q2NL68 480 aa10.75□□□□□ -0.69
PDGFC-205ENST00000506880 SLC10A5Q5PT55 438 aa10.75□□□□□ -0.69
PDGFC-205ENST00000506880 MRPL50Q8N5N7 158 aaKnown RBP10.75□□□□□ -0.69
PDGFC-205ENST00000506880 CNBD1Q8NA66 436 aa10.75□□□□□ -0.69
PDGFC-205ENST00000506880 DNAAF4Q8WXU2 420 aa10.75□□□□□ -0.69
PDGFC-205ENST00000506880 SMC4Q9NTJ3 1288 aa10.75□□□□□ -0.69
PDGFC-205ENST00000506880 PPP1R1BQ9UD71 204 aaPredicted RBP10.75□□□□□ -0.69
PDGFC-205ENST00000506880 ZNF330Q9Y3S2 320 aaPredicted RBP10.75□□□□□ -0.69
PDGFC-205ENST00000506880 ZBTB7AO95365 584 aa10.74□□□□□ -0.69
PDGFC-205ENST00000506880 SERPINB2P05120 415 aa10.74□□□□□ -0.69
PDGFC-205ENST00000506880 CCT4P50991 539 aaKnown RBP10.74□□□□□ -0.69
PDGFC-205ENST00000506880 TTLL7Q6ZT98 887 aa10.74□□□□□ -0.69
PDGFC-205ENST00000506880 NBPF5PQ86XG9 351 aaPredicted RBP10.74□□□□□ -0.69
PDGFC-205ENST00000506880 SSH1Q8WYL5 1049 aa10.74□□□□□ -0.69
PDGFC-205ENST00000506880 UTP14AQ9BVJ6 771 aaKnown RBP10.74□□□□□ -0.69
PDGFC-205ENST00000506880 SRP68Q9UHB9 627 aaKnown RBP10.74□□□□□ -0.69
PDGFC-205ENST00000506880 CDHR2Q9BYE9 1310 aa10.74□□□□□ -0.69
PDGFC-205ENST00000506880 BRCA1P38398 1863 aaKnown RBP10.74□□□□□ -0.69
PDGFC-205ENST00000506880 PI4KAP2A4QPH2 592 aa10.73□□□□□ -0.69
PDGFC-205ENST00000506880 PCCAP05165 728 aaPredicted RBP10.73□□□□□ -0.69
PDGFC-205ENST00000506880 TBC1D9BQ66K14 1250 aa10.73□□□□□ -0.69
PDGFC-205ENST00000506880 TMC4Q7Z404 712 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms