RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 BCL2L12Q9HB09 334 aa14.17□□□□□ -0.14
SNCA-210ENST00000506691 LGR6Q9HBX8 967 aa14.17□□□□□ -0.14
SNCA-210ENST00000506691 CREBZFQ9NS37 354 aa14.17□□□□□ -0.14
SNCA-210ENST00000506691 SCN7AQ01118 1682 aa14.17□□□□□ -0.14
SNCA-210ENST00000506691 CCDC88AQ3V6T2 1871 aa14.16□□□□□ -0.14
SNCA-210ENST00000506691 HSPA1AP0DMV8 641 aaKnown RBP14.16□□□□□ -0.14
SNCA-210ENST00000506691 HSPA1BP0DMV9 641 aaKnown RBP14.16□□□□□ -0.14
SNCA-210ENST00000506691 RASSF7Q02833 373 aa14.16□□□□□ -0.14
SNCA-210ENST00000506691 TAF7Q15545 349 aaPredicted RBP14.16□□□□□ -0.14
SNCA-210ENST00000506691 ZBTB1Q9Y2K1 713 aa14.16□□□□□ -0.14
SNCA-210ENST00000506691 ARFGEF2Q9Y6D5 1785 aa14.16□□□□□ -0.14
SNCA-210ENST00000506691 CARMIL3Q8ND23 1372 aa14.15□□□□□ -0.14
SNCA-210ENST00000506691 POTECB2RU33 542 aa14.15□□□□□ -0.14
SNCA-210ENST00000506691 NEUROD2Q15784 382 aa14.15□□□□□ -0.14
SNCA-210ENST00000506691 C2CD5Q86YS7 1000 aa14.15□□□□□ -0.14
SNCA-210ENST00000506691 SCN4AP35499 1836 aa14.15□□□□□ -0.14
SNCA-210ENST00000506691 IL6STP40189 918 aaPredicted RBP14.14□□□□□ -0.15
SNCA-210ENST00000506691 CHADLQ6NUI6 762 aa14.14□□□□□ -0.15
SNCA-210ENST00000506691 WDR63Q8IWG1 891 aa14.14□□□□□ -0.15
SNCA-210ENST00000506691 TRIM35Q9UPQ4 493 aa14.14□□□□□ -0.15
SNCA-210ENST00000506691 ANKRD31Q8N7Z5 1873 aa14.14□□□□□ -0.15
SNCA-210ENST00000506691 IQCA1LA6NCM1 817 aa14.13□□□□□ -0.15
SNCA-210ENST00000506691 MCM10Q7L590 875 aa14.13□□□□□ -0.15
SNCA-210ENST00000506691 CNKSR1Q969H4 720 aa14.13□□□□□ -0.15
SNCA-210ENST00000506691 L3MBTL3Q96JM7 780 aaPredicted RBP14.13□□□□□ -0.15
SNCA-210ENST00000506691 PRDM10Q9NQV6 1147 aa14.13□□□□□ -0.15
SNCA-210ENST00000506691 RRP7AQ9Y3A4 280 aaKnown RBP14.13□□□□□ -0.15
SNCA-210ENST00000506691 IL16Q14005 1332 aa14.13□□□□□ -0.15
SNCA-210ENST00000506691 DLG5Q8TDM6 1919 aa14.12□□□□□ -0.15
SNCA-210ENST00000506691 ERFEQ4G0M1 354 aa14.12□□□□□ -0.15
SNCA-210ENST00000506691 STYK1Q6J9G0 422 aa14.12□□□□□ -0.15
SNCA-210ENST00000506691 WWC1Q8IX03 1113 aa14.12□□□□□ -0.15
SNCA-210ENST00000506691 TAOK3Q9H2K8 898 aa14.12□□□□□ -0.15
SNCA-210ENST00000506691 BTBD11A6QL63 1104 aa14.11□□□□□ -0.15
SNCA-210ENST00000506691 TTC5Q8N0Z6 440 aa14.11□□□□□ -0.15
SNCA-210ENST00000506691 SIPA1L3O60292 1781 aaPredicted RBP14.11□□□□□ -0.15
SNCA-210ENST00000506691 HEG1Q9ULI3 1381 aa14.1□□□□□ -0.15
SNCA-210ENST00000506691 COL11A2P13942 1736 aaPredicted RBP14.1□□□□□ -0.15
SNCA-210ENST00000506691 GNAI1P63096 354 aa14.1□□□□□ -0.15
SNCA-210ENST00000506691 SLC39A6Q13433 755 aa14.1□□□□□ -0.15
SNCA-210ENST00000506691 DCTN1Q14203 1278 aa14.1□□□□□ -0.15
SNCA-210ENST00000506691 PRR5LQ6MZQ0 368 aa14.1□□□□□ -0.15
SNCA-210ENST00000506691 CLEC4GQ6UXB4 293 aa14.1□□□□□ -0.15
SNCA-210ENST00000506691 CFAP44Q96MT7 982 aa14.1□□□□□ -0.15
SNCA-210ENST00000506691 PASKQ96RG2 1323 aa14.1□□□□□ -0.15
SNCA-210ENST00000506691 CNTNAP1P78357 1384 aa14.09□□□□□ -0.15
SNCA-210ENST00000506691 CHL1O00533 1208 aa14.09□□□□□ -0.15
SNCA-210ENST00000506691 ZNF790Q6PG37 636 aa14.09□□□□□ -0.15
SNCA-210ENST00000506691 LDHDQ86WU2 507 aa14.09□□□□□ -0.15
SNCA-210ENST00000506691 CHMP4AQ9BY43 222 aa14.09□□□□□ -0.15
SNCA-210ENST00000506691 IFT57Q9NWB7 429 aa14.09□□□□□ -0.15
SNCA-210ENST00000506691 BCORQ6W2J9 1755 aa14.09□□□□□ -0.15
SNCA-210ENST00000506691 SRGNP10124 158 aa14.08□□□□□ -0.16
SNCA-210ENST00000506691 MASTLQ96GX5 879 aa14.08□□□□□ -0.16
SNCA-210ENST00000506691 SETDB2Q96T68 719 aa14.08□□□□□ -0.16
SNCA-210ENST00000506691 KLRG2A4D1S0 409 aaPredicted RBP14.07□□□□□ -0.16
SNCA-210ENST00000506691 C21orf2O43822 256 aa14.07□□□□□ -0.16
SNCA-210ENST00000506691 ZNF853P0CG23 659 aa14.07□□□□□ -0.16
SNCA-210ENST00000506691 CANXP27824 592 aaKnown RBP14.07□□□□□ -0.16
SNCA-210ENST00000506691 ST5P78524 1137 aa14.07□□□□□ -0.16
SNCA-210ENST00000506691 TBC1D9BQ66K14 1250 aa14.07□□□□□ -0.16
SNCA-210ENST00000506691 NPM2Q86SE8 214 aaKnown RBP14.07□□□□□ -0.16
SNCA-210ENST00000506691 CNBD1Q8NA66 436 aa14.07□□□□□ -0.16
SNCA-210ENST00000506691 ZNF622Q969S3 477 aaKnown RBP eCLIP14.07□□□□□ -0.16
SNCA-210ENST00000506691 FMNL2Q96PY5 1086 aa14.07□□□□□ -0.16
SNCA-210ENST00000506691 TSPYL4Q9UJ04 414 aa14.07□□□□□ -0.16
SNCA-210ENST00000506691 C7orf43Q8WVR3 580 aa14.06□□□□□ -0.16
SNCA-210ENST00000506691 ZNF496Q96IT1 587 aaPredicted RBP14.06□□□□□ -0.16
SNCA-210ENST00000506691 THUMPD2Q9BTF0 503 aaKnown RBP14.06□□□□□ -0.16
SNCA-210ENST00000506691 ZNF521Q96K83 1311 aa14.06□□□□□ -0.16
SNCA-210ENST00000506691 ADAMTSL1Q8N6G6 1762 aa14.06□□□□□ -0.16
SNCA-210ENST00000506691 CAMTA2O94983 1202 aa14.05□□□□□ -0.16
SNCA-210ENST00000506691 CTCFP49711 727 aaPredicted RBP14.05□□□□□ -0.16
SNCA-210ENST00000506691 HNRNPUQ00839 825 aaKnown RBP eCLIP14.05□□□□□ -0.16
SNCA-210ENST00000506691 GOLGA2Q08379 1002 aa14.05□□□□□ -0.16
SNCA-210ENST00000506691 PRPF40BQ6NWY9 871 aaKnown RBP14.05□□□□□ -0.16
SNCA-210ENST00000506691 PNMA8AQ86V59 439 aaPredicted RBP14.05□□□□□ -0.16
SNCA-210ENST00000506691 MYH16Q9H6N6 1097 aa14.05□□□□□ -0.16
SNCA-210ENST00000506691 SLX4Q8IY92 1834 aa14.05□□□□□ -0.16
SNCA-210ENST00000506691 TMEM88BA6NKF7 163 aa14.04□□□□□ -0.16
SNCA-210ENST00000506691 E9PSI1 815 aa14.04□□□□□ -0.16
SNCA-210ENST00000506691 CAPN15O75808 1086 aa14.04□□□□□ -0.16
SNCA-210ENST00000506691 GRIPAP1Q4V328 841 aa14.04□□□□□ -0.16
SNCA-210ENST00000506691 CCDC93Q567U6 631 aa14.04□□□□□ -0.16
SNCA-210ENST00000506691 RTKN2Q8IZC4 609 aa14.04□□□□□ -0.16
SNCA-210ENST00000506691 TAF1DQ9H5J8 278 aaPredicted RBP14.04□□□□□ -0.16
SNCA-210ENST00000506691 ZNF652Q9Y2D9 606 aa14.04□□□□□ -0.16
SNCA-210ENST00000506691 SALL2Q9Y467 1007 aaPredicted RBP14.04□□□□□ -0.16
SNCA-210ENST00000506691 DDNO94850 711 aaPredicted RBP14.03□□□□□ -0.16
SNCA-210ENST00000506691 ITGBL1O95965 494 aaPredicted RBP14.03□□□□□ -0.16
SNCA-210ENST00000506691 HOXB7P09629 217 aa14.03□□□□□ -0.16
SNCA-210ENST00000506691 SNRPA1P09661 255 aaKnown RBP14.03□□□□□ -0.16
SNCA-210ENST00000506691 BICDL1Q6ZP65 573 aa14.03□□□□□ -0.16
SNCA-210ENST00000506691 LAS1LQ9Y4W2 734 aaKnown RBP14.03□□□□□ -0.16
SNCA-210ENST00000506691 ZBED9Q6R2W3 1325 aa14.02□□□□□ -0.17
SNCA-210ENST00000506691 RASSF10A6NK89 507 aa14.02□□□□□ -0.17
SNCA-210ENST00000506691 NPR1P16066 1061 aa14.02□□□□□ -0.17
SNCA-210ENST00000506691 EIF4A1P60842 406 aaKnown RBP14.02□□□□□ -0.17
SNCA-210ENST00000506691 FKBP4Q02790 459 aaKnown RBP eCLIP14.02□□□□□ -0.17
SNCA-210ENST00000506691 CC2D2BQ6DHV5 1058 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms