RNA–Protein interactions for RNA: ENST00000506626.1

SMAD1-205, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-205ENST00000506626 FAM157BP0CG42 384 aa7.12□□□□□ -1.27
SMAD1-205ENST00000506626 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.12□□□□□ -1.27
SMAD1-205ENST00000506626 PARP3Q9Y6F1 533 aa7.12□□□□□ -1.27
SMAD1-205ENST00000506626 GJA3Q9Y6H8 435 aa7.12□□□□□ -1.27
SMAD1-205ENST00000506626 TXLNAP40222 546 aa7.11□□□□□ -1.27
SMAD1-205ENST00000506626 LRP8Q14114 963 aa7.11□□□□□ -1.27
SMAD1-205ENST00000506626 SAMD5Q5TGI4 173 aa7.11□□□□□ -1.27
SMAD1-205ENST00000506626 BICDL1Q6ZP65 573 aa7.11□□□□□ -1.27
SMAD1-205ENST00000506626 DEPDC4Q8N2C3 294 aa7.11□□□□□ -1.27
SMAD1-205ENST00000506626 ZDHHC1Q8WTX9 485 aa7.11□□□□□ -1.27
SMAD1-205ENST00000506626 RAD21O60216 631 aa7.1□□□□□ -1.27
SMAD1-205ENST00000506626 EPHA4P54764 986 aa7.1□□□□□ -1.27
SMAD1-205ENST00000506626 ZNF468Q5VIY5 522 aaPredicted RBP7.1□□□□□ -1.27
SMAD1-205ENST00000506626 MDFIQ99750 246 aa7.1□□□□□ -1.27
SMAD1-205ENST00000506626 POM121CA8CG34 1229 aa7.09□□□□□ -1.27
SMAD1-205ENST00000506626 EFSO43281 561 aa7.09□□□□□ -1.27
SMAD1-205ENST00000506626 COL9A3Q14050 684 aaPredicted RBP7.09□□□□□ -1.27
SMAD1-205ENST00000506626 TEAD4Q15561 434 aa7.09□□□□□ -1.27
SMAD1-205ENST00000506626 SLC9A9Q8IVB4 645 aa7.09□□□□□ -1.27
SMAD1-205ENST00000506626 ADAMTS19Q8TE59 1207 aa7.09□□□□□ -1.27
SMAD1-205ENST00000506626 L3MBTL2Q969R5 705 aa7.09□□□□□ -1.27
SMAD1-205ENST00000506626 STRN4Q9NRL3 753 aa7.09□□□□□ -1.27
SMAD1-205ENST00000506626 EML1O00423 815 aa7.08□□□□□ -1.28
SMAD1-205ENST00000506626 UBTFP17480 764 aaKnown RBP7.08□□□□□ -1.28
SMAD1-205ENST00000506626 PCBP4P57723 403 aaKnown RBP7.08□□□□□ -1.28
SMAD1-205ENST00000506626 LAMC2Q13753 1193 aa7.08□□□□□ -1.28
SMAD1-205ENST00000506626 TRIM50Q86XT4 487 aa7.08□□□□□ -1.28
SMAD1-205ENST00000506626 TNS4Q8IZW8 715 aa7.08□□□□□ -1.28
SMAD1-205ENST00000506626 MARK1Q9P0L2 795 aa7.08□□□□□ -1.28
SMAD1-205ENST00000506626 PRR12Q9ULL5 1215 aa7.08□□□□□ -1.28
SMAD1-205ENST00000506626 USP17L3A6NCW0 530 aa7.07□□□□□ -1.28
SMAD1-205ENST00000506626 USP17L4A6NCW7 530 aa7.07□□□□□ -1.28
SMAD1-205ENST00000506626 SPDYE3A6NKU9 549 aa7.07□□□□□ -1.28
SMAD1-205ENST00000506626 NOS2P35228 1153 aa7.07□□□□□ -1.28
SMAD1-205ENST00000506626 FLIIQ13045 1269 aa7.07□□□□□ -1.28
SMAD1-205ENST00000506626 PRRT3Q5FWE3 981 aa7.07□□□□□ -1.28
SMAD1-205ENST00000506626 TBCELQ5QJ74 424 aa7.07□□□□□ -1.28
SMAD1-205ENST00000506626 USP17L2Q6R6M4 530 aa7.07□□□□□ -1.28
SMAD1-205ENST00000506626 USP17L1Q7RTZ2 530 aa7.07□□□□□ -1.28
SMAD1-205ENST00000506626 PLEKHM2Q8IWE5 1019 aa7.07□□□□□ -1.28
SMAD1-205ENST00000506626 ZNF232Q9UNY5 417 aa7.07□□□□□ -1.28
SMAD1-205ENST00000506626 KIAA1024Q9UPX6 916 aa7.07□□□□□ -1.28
SMAD1-205ENST00000506626 GPC6Q9Y625 555 aaPredicted RBP7.07□□□□□ -1.28
SMAD1-205ENST00000506626 ELOA3CA0A087WX78 387 aaPredicted RBP7.06□□□□□ -1.28
SMAD1-205ENST00000506626 ELOA3DA6NLF2 546 aaPredicted RBP7.06□□□□□ -1.28
SMAD1-205ENST00000506626 HYAL3O43820 417 aaPredicted RBP7.06□□□□□ -1.28
SMAD1-205ENST00000506626 APBA3O96018 575 aa7.06□□□□□ -1.28
SMAD1-205ENST00000506626 ELOA3BQ3SY89 546 aa7.06□□□□□ -1.28
SMAD1-205ENST00000506626 SH3PXD2AQ5TCZ1 1133 aa7.06□□□□□ -1.28
SMAD1-205ENST00000506626 ELOA3Q8NG57 546 aa7.06□□□□□ -1.28
SMAD1-205ENST00000506626 TPCN2Q8NHX9 752 aa7.06□□□□□ -1.28
SMAD1-205ENST00000506626 UCN2Q96RP3 112 aa7.06□□□□□ -1.28
SMAD1-205ENST00000506626 FAM229AH3BQW9 127 aa7.05□□□□□ -1.28
SMAD1-205ENST00000506626 ZBTB7BO15156 539 aaPredicted RBP7.05□□□□□ -1.28
SMAD1-205ENST00000506626 H2AFB1P0C5Y9 115 aa7.05□□□□□ -1.28
SMAD1-205ENST00000506626 H2AFB2P0C5Z0 115 aa7.05□□□□□ -1.28
SMAD1-205ENST00000506626 ATP1A2P50993 1020 aa7.05□□□□□ -1.28
SMAD1-205ENST00000506626 CLDN10P78369 228 aa7.05□□□□□ -1.28
SMAD1-205ENST00000506626 CCDC102BQ68D86 513 aa7.05□□□□□ -1.28
SMAD1-205ENST00000506626 LRRC69Q6ZNQ3 347 aa7.05□□□□□ -1.28
SMAD1-205ENST00000506626 C7orf43Q8WVR3 580 aa7.05□□□□□ -1.28
SMAD1-205ENST00000506626 SERTM1A2A2V5 107 aa7.04□□□□□ -1.28
SMAD1-205ENST00000506626 ATP9BO43861 1147 aa7.04□□□□□ -1.28
SMAD1-205ENST00000506626 SYT9Q86SS6 491 aa7.04□□□□□ -1.28
SMAD1-205ENST00000506626 KRTAP4-7Q9BYR0 210 aa7.04□□□□□ -1.28
SMAD1-205ENST00000506626 PRDM6Q9NQX0 595 aa7.04□□□□□ -1.28
SMAD1-205ENST00000506626 PSMA6P60900 246 aaKnown RBP7.03□□□□□ -1.28
SMAD1-205ENST00000506626 HDGFL1Q5TGJ6 251 aa7.03□□□□□ -1.28
SMAD1-205ENST00000506626 RHPN1Q8TCX5 695 aa7.03□□□□□ -1.28
SMAD1-205ENST00000506626 NACC1Q96RE7 527 aa7.03□□□□□ -1.28
SMAD1-205ENST00000506626 TSPAN10Q9H1Z9 355 aaPredicted RBP7.03□□□□□ -1.28
SMAD1-205ENST00000506626 NEUROD4Q9HD90 331 aa7.03□□□□□ -1.28
SMAD1-205ENST00000506626 M0R2N6 131 aa7.02□□□□□ -1.29
SMAD1-205ENST00000506626 HIRAP54198 1017 aaPredicted RBP7.02□□□□□ -1.29
SMAD1-205ENST00000506626 POTEAQ6S8J7 498 aa7.02□□□□□ -1.29
SMAD1-205ENST00000506626 LARGE2Q8N3Y3 721 aa7.02□□□□□ -1.29
SMAD1-205ENST00000506626 OGFOD1Q8N543 542 aa7.02□□□□□ -1.29
SMAD1-205ENST00000506626 PALM3A6NDB9 673 aaPredicted RBP7.01□□□□□ -1.29
SMAD1-205ENST00000506626 SIN3BO75182 1162 aa7.01□□□□□ -1.29
SMAD1-205ENST00000506626 NID1P14543 1247 aa7.01□□□□□ -1.29
SMAD1-205ENST00000506626 SFSWAPQ12872 951 aaKnown RBP7.01□□□□□ -1.29
SMAD1-205ENST00000506626 C1orf53Q5VUE5 145 aa7.01□□□□□ -1.29
SMAD1-205ENST00000506626 MCTP1Q6DN14 999 aa7.01□□□□□ -1.29
SMAD1-205ENST00000506626 SIX5Q8N196 739 aa7.01□□□□□ -1.29
SMAD1-205ENST00000506626 MKRN1Q9UHC7 482 aaKnown RBP7.01□□□□□ -1.29
SMAD1-205ENST00000506626 CHMP3Q9Y3E7 222 aa7.01□□□□□ -1.29
SMAD1-205ENST00000506626 STARD13Q9Y3M8 1113 aa7.01□□□□□ -1.29
SMAD1-205ENST00000506626 ADARB2-AS1A8MUL3 147 aa7□□□□□ -1.29
SMAD1-205ENST00000506626 M0R082 166 aa7□□□□□ -1.29
SMAD1-205ENST00000506626 ADGRE1Q14246 886 aa7□□□□□ -1.29
SMAD1-205ENST00000506626 GRIK4Q16099 956 aa7□□□□□ -1.29
SMAD1-205ENST00000506626 LCE1DQ5T752 114 aa7□□□□□ -1.29
SMAD1-205ENST00000506626 ZNF417Q8TAU3 575 aa7□□□□□ -1.29
SMAD1-205ENST00000506626 ZNF594Q96JF6 807 aaPredicted RBP7□□□□□ -1.29
SMAD1-205ENST00000506626 HSH2DQ96JZ2 352 aa7□□□□□ -1.29
SMAD1-205ENST00000506626 ZNF587Q96SQ5 575 aaPredicted RBP7□□□□□ -1.29
SMAD1-205ENST00000506626 SLC30A3Q99726 388 aa7□□□□□ -1.29
SMAD1-205ENST00000506626 PHACTR1Q9C0D0 580 aa7□□□□□ -1.29
SMAD1-205ENST00000506626 ALAS2P22557 587 aa6.99□□□□□ -1.29
SMAD1-205ENST00000506626 MBTPS1Q14703 1052 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms