RNA–Protein interactions for RNA: ENST00000506401.6

ITGA3-207, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-207ENST00000506401 MYD88Q99836 296 aa22.38■■□□□ 1.17
ITGA3-207ENST00000506401 BCL11BQ9C0K0 894 aaPredicted RBP22.38■■□□□ 1.17
ITGA3-207ENST00000506401 ANKRD44Q8N8A2 993 aa22.37■■□□□ 1.17
ITGA3-207ENST00000506401 CCDC87Q9NVE4 849 aa22.37■■□□□ 1.17
ITGA3-207ENST00000506401 C9orf78Q9NZ63 289 aaPredicted RBP22.37■■□□□ 1.17
ITGA3-207ENST00000506401 HDAC5Q9UQL6 1122 aa22.37■■□□□ 1.17
ITGA3-207ENST00000506401 IL6STP40189 918 aaPredicted RBP22.36■■□□□ 1.17
ITGA3-207ENST00000506401 ITPK1Q13572 414 aa22.36■■□□□ 1.17
ITGA3-207ENST00000506401 CWF19L2Q2TBE0 894 aaKnown RBP22.36■■□□□ 1.17
ITGA3-207ENST00000506401 KIF6Q6ZMV9 814 aa22.36■■□□□ 1.17
ITGA3-207ENST00000506401 ZBTB1Q9Y2K1 713 aa22.36■■□□□ 1.17
ITGA3-207ENST00000506401 CRKLP46109 303 aaKnown RBP22.36■■□□□ 1.17
ITGA3-207ENST00000506401 CEP85Q6P2H3 762 aa22.36■■□□□ 1.17
ITGA3-207ENST00000506401 IBTKQ9P2D0 1353 aaPredicted RBP22.35■■□□□ 1.17
ITGA3-207ENST00000506401 IGKV5-2P06315 115 aa22.35■■□□□ 1.17
ITGA3-207ENST00000506401 SIRT2Q8IXJ6 389 aa22.35■■□□□ 1.17
ITGA3-207ENST00000506401 NEURL1BA8MQ27 555 aa22.34■■□□□ 1.17
ITGA3-207ENST00000506401 NUP188Q5SRE5 1749 aa22.34■■□□□ 1.17
ITGA3-207ENST00000506401 HMMRO75330 724 aa22.34■■□□□ 1.17
ITGA3-207ENST00000506401 INTS5Q6P9B9 1019 aaKnown RBP22.34■■□□□ 1.17
ITGA3-207ENST00000506401 ARXQ96QS3 562 aa22.34■■□□□ 1.17
ITGA3-207ENST00000506401 ZBTB3Q9H5J0 574 aa22.34■■□□□ 1.17
ITGA3-207ENST00000506401 LRRFIP2Q9Y608 721 aaKnown RBP22.34■■□□□ 1.17
ITGA3-207ENST00000506401 AFDNP55196 1824 aaKnown RBP22.33■■□□□ 1.17
ITGA3-207ENST00000506401 NBPF7P0C2Y1 421 aaPredicted RBP22.33■■□□□ 1.16
ITGA3-207ENST00000506401 GRM8O00222 908 aa22.32■■□□□ 1.16
ITGA3-207ENST00000506401 SMC5Q8IY18 1101 aa22.32■■□□□ 1.16
ITGA3-207ENST00000506401 GCC1Q96CN9 775 aa22.32■■□□□ 1.16
ITGA3-207ENST00000506401 RGS17Q9UGC6 210 aaPredicted RBP22.32■■□□□ 1.16
ITGA3-207ENST00000506401 COL5A3P25940 1745 aaPredicted RBP22.32■■□□□ 1.16
ITGA3-207ENST00000506401 GCKRQ14397 625 aa22.31■■□□□ 1.16
ITGA3-207ENST00000506401 RREB1Q92766 1687 aa22.31■■□□□ 1.16
ITGA3-207ENST00000506401 MYH14Q7Z406 1995 aaKnown RBP22.31■■□□□ 1.16
ITGA3-207ENST00000506401 UTYO14607 1347 aa22.31■■□□□ 1.16
ITGA3-207ENST00000506401 MAP3K15Q6ZN16 1313 aa22.31■■□□□ 1.16
ITGA3-207ENST00000506401 LY75O60449 1722 aa22.3■■□□□ 1.16
ITGA3-207ENST00000506401 ATP5J2-PTCD1G3V325 749 aa22.3■■□□□ 1.16
ITGA3-207ENST00000506401 EIF5P55010 431 aaKnown RBP22.3■■□□□ 1.16
ITGA3-207ENST00000506401 ATP8B2P98198 1209 aa22.3■■□□□ 1.16
ITGA3-207ENST00000506401 CCNL1Q9UK58 526 aaPredicted RBP22.3■■□□□ 1.16
ITGA3-207ENST00000506401 LINC00116Q8NCU8 138 aa22.29■■□□□ 1.16
ITGA3-207ENST00000506401 PDZRN3Q9UPQ7 1066 aa22.29■■□□□ 1.16
ITGA3-207ENST00000506401 TRIM37O94972 964 aa22.29■■□□□ 1.16
ITGA3-207ENST00000506401 POTEAQ6S8J7 498 aa22.29■■□□□ 1.16
ITGA3-207ENST00000506401 DZIP3Q86Y13 1208 aaKnown RBP22.29■■□□□ 1.16
ITGA3-207ENST00000506401 TCIRG1Q13488 830 aa22.28■■□□□ 1.16
ITGA3-207ENST00000506401 ERVV-1B6SEH8 477 aa22.27■■□□□ 1.16
ITGA3-207ENST00000506401 HSP90AB3PQ58FF7 597 aa22.27■■□□□ 1.16
ITGA3-207ENST00000506401 RC3H1Q5TC82 1133 aaKnown RBP22.27■■□□□ 1.16
ITGA3-207ENST00000506401 GIGYF2Q6Y7W6 1299 aaKnown RBP22.27■■□□□ 1.16
ITGA3-207ENST00000506401 CCDC191Q8NCU4 936 aa22.27■■□□□ 1.16
ITGA3-207ENST00000506401 DCTPP1Q9H773 170 aa22.27■■□□□ 1.16
ITGA3-207ENST00000506401 CWC25Q9NXE8 425 aaPredicted RBP22.27■■□□□ 1.16
ITGA3-207ENST00000506401 CNTNAP4Q9C0A0 1308 aa22.27■■□□□ 1.16
ITGA3-207ENST00000506401 KCNQ4P56696 695 aa22.27■■□□□ 1.15
ITGA3-207ENST00000506401 A0A087WZG4 1122 aa22.26■■□□□ 1.15
ITGA3-207ENST00000506401 TBC1D2BQ9UPU7 963 aa22.26■■□□□ 1.15
ITGA3-207ENST00000506401 TRIM28Q13263 835 aaKnown RBP22.25■■□□□ 1.15
ITGA3-207ENST00000506401 ISCA1Q9BUE6 129 aa22.25■■□□□ 1.15
ITGA3-207ENST00000506401 NUCB1Q02818 461 aa22.24■■□□□ 1.15
ITGA3-207ENST00000506401 SKAP1Q86WV1 359 aa22.24■■□□□ 1.15
ITGA3-207ENST00000506401 NUP98P52948 1817 aa22.24■■□□□ 1.15
ITGA3-207ENST00000506401 TAF1LQ8IZX4 1826 aa22.24■■□□□ 1.15
ITGA3-207ENST00000506401 PNMA6EA0A0J9YXQ4 647 aa22.23■■□□□ 1.15
ITGA3-207ENST00000506401 RGS3P49796 1198 aa22.23■■□□□ 1.15
ITGA3-207ENST00000506401 HLFQ16534 295 aa22.23■■□□□ 1.15
ITGA3-207ENST00000506401 ANKRD45Q5TZF3 282 aa22.23■■□□□ 1.15
ITGA3-207ENST00000506401 PPP1R42Q7Z4L9 355 aa22.23■■□□□ 1.15
ITGA3-207ENST00000506401 SUCLG2Q96I99 432 aa22.23■■□□□ 1.15
ITGA3-207ENST00000506401 UBE3BQ7Z3V4 1068 aa22.22■■□□□ 1.15
ITGA3-207ENST00000506401 SSH3Q8TE77 659 aa22.22■■□□□ 1.15
ITGA3-207ENST00000506401 ZBTB47Q9UFB7 747 aaPredicted RBP22.22■■□□□ 1.15
ITGA3-207ENST00000506401 COL15A1P39059 1388 aa22.22■■□□□ 1.15
ITGA3-207ENST00000506401 H7C1W4 665 aa22.22■■□□□ 1.15
ITGA3-207ENST00000506401 HMGB2P26583 209 aaKnown RBP22.22■■□□□ 1.15
ITGA3-207ENST00000506401 MTX1Q13505 466 aa22.22■■□□□ 1.15
ITGA3-207ENST00000506401 SLC27A3Q5K4L6 730 aa22.22■■□□□ 1.15
ITGA3-207ENST00000506401 CHD1LQ86WJ1 897 aa22.22■■□□□ 1.15
ITGA3-207ENST00000506401 ANKRD36CQ5JPF3 1778 aa22.21■■□□□ 1.15
ITGA3-207ENST00000506401 SRGAP3O43295 1099 aa22.21■■□□□ 1.15
ITGA3-207ENST00000506401 RPS6KA4O75676 772 aa22.21■■□□□ 1.15
ITGA3-207ENST00000506401 POLA2Q14181 598 aa22.2■■□□□ 1.14
ITGA3-207ENST00000506401 BICC1Q9H694 974 aaKnown RBP22.2■■□□□ 1.14
ITGA3-207ENST00000506401 JARID2Q92833 1246 aaPredicted RBP22.19■■□□□ 1.14
ITGA3-207ENST00000506401 KAZALD1Q96I82 304 aa22.19■■□□□ 1.14
ITGA3-207ENST00000506401 GNPATO15228 680 aa22.18■■□□□ 1.14
ITGA3-207ENST00000506401 CAMTA2O94983 1202 aa22.18■■□□□ 1.14
ITGA3-207ENST00000506401 CASP7P55210 303 aa22.18■■□□□ 1.14
ITGA3-207ENST00000506401 RTCBQ9Y3I0 505 aaKnown RBP22.18■■□□□ 1.14
ITGA3-207ENST00000506401 LNPKQ9C0E8 428 aa22.17■■□□□ 1.14
ITGA3-207ENST00000506401 LRRC4BQ9NT99 713 aa22.17■■□□□ 1.14
ITGA3-207ENST00000506401 ZNF652Q9Y2D9 606 aa22.17■■□□□ 1.14
ITGA3-207ENST00000506401 C4BP0C0L5 1744 aa22.17■■□□□ 1.14
ITGA3-207ENST00000506401 PCCAP05165 728 aaPredicted RBP22.17■■□□□ 1.14
ITGA3-207ENST00000506401 GPTP24298 496 aa22.17■■□□□ 1.14
ITGA3-207ENST00000506401 NLRP10Q86W26 655 aa22.17■■□□□ 1.14
ITGA3-207ENST00000506401 EP400Q96L91 3159 aa22.16■■□□□ 1.14
ITGA3-207ENST00000506401 ZNF34Q8IZ26 560 aa22.16■■□□□ 1.14
ITGA3-207ENST00000506401 AK7Q96M32 723 aa22.16■■□□□ 1.14
ITGA3-207ENST00000506401 PLSCR1O15162 318 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms