RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 TMX4Q9H1E5 349 aaPredicted RBP2.9□□□□□ -1.95
NEDD4-205ENST00000506154 TUT1Q9H6E5 874 aaKnown RBP2.9□□□□□ -1.95
NEDD4-205ENST00000506154 CCDC61Q9Y6R9 512 aa2.9□□□□□ -1.95
NEDD4-205ENST00000506154 EDC4Q6P2E9 1401 aaKnown RBP2.9□□□□□ -1.95
NEDD4-205ENST00000506154 DLEC1Q9Y238 1755 aa2.9□□□□□ -1.95
NEDD4-205ENST00000506154 C3orf80F5H4A9 247 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 C6orf229H3BNL8 230 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 MAPK1P28482 360 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 CLK2P49760 499 aaKnown RBP2.89□□□□□ -1.95
NEDD4-205ENST00000506154 UVSSAQ2YD98 709 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 MYSM1Q5VVJ2 828 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 DNAJC14Q6Y2X3 702 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-205ENST00000506154 NKX2-3Q8TAU0 364 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 ARFGEF2Q9Y6D5 1785 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 PAPPA2Q9BXP8 1791 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 GNPATO15228 680 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 CAPN2P17655 700 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 PURBQ96QR8 312 aaKnown RBP2.89□□□□□ -1.95
NEDD4-205ENST00000506154 PPP4R2Q9NY27 417 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 MOXD2PA6NHM9 499 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 GPR37O15354 613 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 FAM163BP0C2L3 166 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 NBPF9Q3BBW0 867 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 RAI14Q9P0K7 980 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 ROCK2O75116 1388 aaKnown RBP2.89□□□□□ -1.95
NEDD4-205ENST00000506154 IRX5P78411 483 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-205ENST00000506154 MAP2K5Q13163 448 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 SDR16C5Q8N3Y7 309 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 NGEFQ8N5V2 710 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 IGSF5Q9NSI5 407 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 PALM3A6NDB9 673 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-205ENST00000506154 GOLGA6L3A6NEY3 463 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 G3V3G9 751 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 MAPK8P45983 427 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 TAF3Q5VWG9 929 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 SPIRE2Q8WWL2 714 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 TRIM44Q96DX7 344 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-205ENST00000506154 KCNH8Q96L42 1107 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 TONSLQ96HA7 1378 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 ANKRD36CQ5JPF3 1778 aa2.89□□□□□ -1.95
NEDD4-205ENST00000506154 EVA1CP58658 441 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 PUS10Q3MIT2 529 aaKnown RBP2.88□□□□□ -1.95
NEDD4-205ENST00000506154 ZC3H12AQ5D1E8 599 aaKnown RBP2.88□□□□□ -1.95
NEDD4-205ENST00000506154 RIC3Q7Z5B4 369 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 RTL1A6NKG5 1358 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 ARAP2Q8WZ64 1704 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 LETM1O95202 739 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-205ENST00000506154 USP17L8P0C7I0 530 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 OSBPP22059 807 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 FLIIQ13045 1269 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 CNGB1Q14028 1251 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-205ENST00000506154 CCDC96Q2M329 555 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 FAM86C2PA6NEL3 165 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 EVI5O60447 810 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 PEX14O75381 377 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 DNAJA1P31689 397 aaKnown RBP2.88□□□□□ -1.95
NEDD4-205ENST00000506154 OXLD1Q5BKU9 147 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 NLRP13Q86W25 1043 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 OTUD6BQ8N6M0 293 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 MS4A3Q96HJ5 214 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 OFD1O75665 1012 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 SETDB1Q15047 1291 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 CERS3Q8IU89 383 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 A0A1W2PP64 1363 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 MTA1Q13330 715 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 SWT1Q5T5J6 900 aaKnown RBP2.88□□□□□ -1.95
NEDD4-205ENST00000506154 SNED1Q8TER0 1413 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 KIF16BQ96L93 1317 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 GSCP56915 257 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-205ENST00000506154 ZNF592Q92610 1267 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 HINFPQ9BQA5 517 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 ANTXR1Q9H6X2 564 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 SERPINA10Q9UK55 444 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 HDAC5Q9UQL6 1122 aa2.88□□□□□ -1.95
NEDD4-205ENST00000506154 NOL8Q76FK4 1167 aaKnown RBP2.87□□□□□ -1.95
NEDD4-205ENST00000506154 NGLY1Q96IV0 654 aa2.87□□□□□ -1.95
NEDD4-205ENST00000506154 SIN3AQ96ST3 1273 aa2.87□□□□□ -1.95
NEDD4-205ENST00000506154 SGIP1Q9BQI5 828 aa2.87□□□□□ -1.95
NEDD4-205ENST00000506154 SOS2Q07890 1332 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-205ENST00000506154 COQ9O75208 318 aa2.87□□□□□ -1.95
NEDD4-205ENST00000506154 CD44P16070 742 aaKnown RBP2.87□□□□□ -1.95
NEDD4-205ENST00000506154 NOP2P46087 812 aaKnown RBP2.87□□□□□ -1.95
NEDD4-205ENST00000506154 ATG3Q9NT62 314 aa2.87□□□□□ -1.95
NEDD4-205ENST00000506154 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.87□□□□□ -1.95
NEDD4-205ENST00000506154 MAGEB6P1A0A0J9YX57 407 aa2.87□□□□□ -1.95
NEDD4-205ENST00000506154 HSP90AA1P07900 732 aaKnown RBP2.87□□□□□ -1.95
NEDD4-205ENST00000506154 CHMLP26374 656 aa2.87□□□□□ -1.95
NEDD4-205ENST00000506154 FAM193AP78312 1265 aa2.87□□□□□ -1.95
NEDD4-205ENST00000506154 RALBP1Q15311 655 aa2.87□□□□□ -1.95
NEDD4-205ENST00000506154 NFKBIBQ15653 356 aa2.87□□□□□ -1.95
NEDD4-205ENST00000506154 C1QTNF12Q5T7M4 302 aa2.87□□□□□ -1.95
NEDD4-205ENST00000506154 TSHZ1Q6ZSZ6 1077 aa2.87□□□□□ -1.95
NEDD4-205ENST00000506154 NUTM1Q86Y26 1132 aa2.87□□□□□ -1.95
NEDD4-205ENST00000506154 RRP7BPQ9NSQ0 103 aa2.87□□□□□ -1.95
NEDD4-205ENST00000506154 FAM86C1Q9NVL1 165 aa2.87□□□□□ -1.95
NEDD4-205ENST00000506154 CEMIPQ8WUJ3 1361 aa2.87□□□□□ -1.95
NEDD4-205ENST00000506154 TCERG1O14776 1098 aaKnown RBP2.87□□□□□ -1.95
NEDD4-205ENST00000506154 NUDT7P0C024 238 aa2.87□□□□□ -1.95
NEDD4-205ENST00000506154 TMEM164Q5U3C3 297 aa2.87□□□□□ -1.95
NEDD4-205ENST00000506154 USP20Q9Y2K6 914 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms