RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 CAMTA2O94983 1202 aa14.12□□□□□ -0.15
CPNE4-206ENST00000505957 NPM2Q86SE8 214 aaKnown RBP14.12□□□□□ -0.15
CPNE4-206ENST00000505957 CNBD1Q8NA66 436 aa14.12□□□□□ -0.15
CPNE4-206ENST00000505957 FMNL2Q96PY5 1086 aa14.12□□□□□ -0.15
CPNE4-206ENST00000505957 SRGNP10124 158 aa14.11□□□□□ -0.15
CPNE4-206ENST00000505957 ST5P78524 1137 aa14.11□□□□□ -0.15
CPNE4-206ENST00000505957 MASTLQ96GX5 879 aa14.11□□□□□ -0.15
CPNE4-206ENST00000505957 ZNF219Q9P2Y4 722 aaPredicted RBP14.11□□□□□ -0.15
CPNE4-206ENST00000505957 CEMIPQ8WUJ3 1361 aa14.1□□□□□ -0.15
CPNE4-206ENST00000505957 PCNTO95613 3336 aa14.1□□□□□ -0.15
CPNE4-206ENST00000505957 A1BGP04217 495 aa14.1□□□□□ -0.15
CPNE4-206ENST00000505957 PRPF40BQ6NWY9 871 aaKnown RBP14.1□□□□□ -0.15
CPNE4-206ENST00000505957 CLEC4GQ6UXB4 293 aa14.1□□□□□ -0.15
CPNE4-206ENST00000505957 CCDC24Q8N4L8 307 aa14.1□□□□□ -0.15
CPNE4-206ENST00000505957 ZNF330Q9Y3S2 320 aaPredicted RBP14.1□□□□□ -0.15
CPNE4-206ENST00000505957 COL3A1P02461 1466 aaPredicted RBP14.1□□□□□ -0.15
CPNE4-206ENST00000505957 SCN7AQ01118 1682 aa14.1□□□□□ -0.15
CPNE4-206ENST00000505957 FER1L6Q2WGJ9 1857 aa14.1□□□□□ -0.15
CPNE4-206ENST00000505957 ANKRD31Q8N7Z5 1873 aa14.1□□□□□ -0.15
CPNE4-206ENST00000505957 IQCA1LA6NCM1 817 aa14.09□□□□□ -0.15
CPNE4-206ENST00000505957 DDNO94850 711 aaPredicted RBP14.09□□□□□ -0.15
CPNE4-206ENST00000505957 L3MBTL3Q96JM7 780 aaPredicted RBP14.09□□□□□ -0.15
CPNE4-206ENST00000505957 CCDC88AQ3V6T2 1871 aa14.09□□□□□ -0.15
CPNE4-206ENST00000505957 DICER1Q9UPY3 1922 aaKnown RBP14.08□□□□□ -0.16
CPNE4-206ENST00000505957 U2SURPO15042 1029 aaKnown RBP14.08□□□□□ -0.16
CPNE4-206ENST00000505957 RGL2O15211 777 aa14.08□□□□□ -0.16
CPNE4-206ENST00000505957 NPHP1O15259 732 aa14.08□□□□□ -0.16
CPNE4-206ENST00000505957 DZIP3Q86Y13 1208 aaKnown RBP14.08□□□□□ -0.16
CPNE4-206ENST00000505957 C7orf43Q8WVR3 580 aa14.08□□□□□ -0.16
CPNE4-206ENST00000505957 PASKQ96RG2 1323 aa14.08□□□□□ -0.16
CPNE4-206ENST00000505957 KLRG2A4D1S0 409 aaPredicted RBP14.07□□□□□ -0.16
CPNE4-206ENST00000505957 BTBD11A6QL63 1104 aa14.07□□□□□ -0.16
CPNE4-206ENST00000505957 POTEIP0CG38 1075 aa14.07□□□□□ -0.16
CPNE4-206ENST00000505957 POTEJP0CG39 1038 aa14.07□□□□□ -0.16
CPNE4-206ENST00000505957 LDHDQ86WU2 507 aa14.07□□□□□ -0.16
CPNE4-206ENST00000505957 MKRN1Q9UHC7 482 aaKnown RBP14.07□□□□□ -0.16
CPNE4-206ENST00000505957 CNTNAP1P78357 1384 aa14.07□□□□□ -0.16
CPNE4-206ENST00000505957 COL11A2P13942 1736 aaPredicted RBP14.07□□□□□ -0.16
CPNE4-206ENST00000505957 SIPA1L3O60292 1781 aaPredicted RBP14.06□□□□□ -0.16
CPNE4-206ENST00000505957 NPR1P16066 1061 aa14.06□□□□□ -0.16
CPNE4-206ENST00000505957 WDR43Q15061 677 aaKnown RBP eCLIP14.06□□□□□ -0.16
CPNE4-206ENST00000505957 CCDC93Q567U6 631 aa14.06□□□□□ -0.16
CPNE4-206ENST00000505957 NGEFQ8N5V2 710 aa14.06□□□□□ -0.16
CPNE4-206ENST00000505957 TAF1DQ9H5J8 278 aaPredicted RBP14.06□□□□□ -0.16
CPNE4-206ENST00000505957 ZNF652Q9Y2D9 606 aa14.06□□□□□ -0.16
CPNE4-206ENST00000505957 KCNQ3O43525 872 aa14.05□□□□□ -0.16
CPNE4-206ENST00000505957 NBPF5PQ86XG9 351 aaPredicted RBP14.05□□□□□ -0.16
CPNE4-206ENST00000505957 PRDM10Q9NQV6 1147 aa14.05□□□□□ -0.16
CPNE4-206ENST00000505957 GTF3C3Q9Y5Q9 886 aa14.05□□□□□ -0.16
CPNE4-206ENST00000505957 USP16Q9Y5T5 823 aa14.05□□□□□ -0.16
CPNE4-206ENST00000505957 SLX4Q8IY92 1834 aa14.05□□□□□ -0.16
CPNE4-206ENST00000505957 ITGBL1O95965 494 aaPredicted RBP14.04□□□□□ -0.16
CPNE4-206ENST00000505957 SNRPA1P09661 255 aaKnown RBP14.04□□□□□ -0.16
CPNE4-206ENST00000505957 FKBP4Q02790 459 aaKnown RBP eCLIP14.04□□□□□ -0.16
CPNE4-206ENST00000505957 TPTE2Q6XPS3 522 aa14.04□□□□□ -0.16
CPNE4-206ENST00000505957 PHACTR3Q96KR7 559 aa14.04□□□□□ -0.16
CPNE4-206ENST00000505957 CFAP53Q96M91 514 aa14.04□□□□□ -0.16
CPNE4-206ENST00000505957 TMEM88BA6NKF7 163 aa14.03□□□□□ -0.16
CPNE4-206ENST00000505957 NCBP3Q53F19 620 aaKnown RBP14.03□□□□□ -0.16
CPNE4-206ENST00000505957 RTKN2Q8IZC4 609 aa14.03□□□□□ -0.16
CPNE4-206ENST00000505957 RSPH6AQ9H0K4 717 aa14.03□□□□□ -0.16
CPNE4-206ENST00000505957 ADAMTS8Q9UP79 889 aa14.03□□□□□ -0.16
CPNE4-206ENST00000505957 ARFGEF2Q9Y6D5 1785 aa14.02□□□□□ -0.16
CPNE4-206ENST00000505957 FOXN1O15353 648 aa14.02□□□□□ -0.17
CPNE4-206ENST00000505957 PRKAR2BP31323 418 aa14.02□□□□□ -0.17
CPNE4-206ENST00000505957 HACL1Q9UJ83 578 aa14.02□□□□□ -0.17
CPNE4-206ENST00000505957 SCN4AP35499 1836 aa14.01□□□□□ -0.17
CPNE4-206ENST00000505957 BCORQ6W2J9 1755 aa14.01□□□□□ -0.17
CPNE4-206ENST00000505957 FZD9O00144 591 aa14.01□□□□□ -0.17
CPNE4-206ENST00000505957 ALDH1B1P30837 517 aa14.01□□□□□ -0.17
CPNE4-206ENST00000505957 PIP4K2AP48426 406 aaPredicted RBP14.01□□□□□ -0.17
CPNE4-206ENST00000505957 CTCFP49711 727 aaPredicted RBP14.01□□□□□ -0.17
CPNE4-206ENST00000505957 VEGFBP49765 207 aa14.01□□□□□ -0.17
CPNE4-206ENST00000505957 PNMA8AQ86V59 439 aaPredicted RBP14.01□□□□□ -0.17
CPNE4-206ENST00000505957 ZNF277Q9NRM2 450 aaPredicted RBP14.01□□□□□ -0.17
CPNE4-206ENST00000505957 NIP7Q9Y221 180 aaKnown RBP eCLIP14.01□□□□□ -0.17
CPNE4-206ENST00000505957 ZNF541Q9H0D2 1346 aa14□□□□□ -0.17
CPNE4-206ENST00000505957 PRAMEF22A3QJZ6 481 aa14□□□□□ -0.17
CPNE4-206ENST00000505957 HTATSF1O43719 755 aaKnown RBP14□□□□□ -0.17
CPNE4-206ENST00000505957 EPHX2P34913 555 aa14□□□□□ -0.17
CPNE4-206ENST00000505957 RTF1Q92541 710 aaKnown RBP14□□□□□ -0.17
CPNE4-206ENST00000505957 AIDAQ96BJ3 306 aa14□□□□□ -0.17
CPNE4-206ENST00000505957 WBP1LQ9NX94 342 aa14□□□□□ -0.17
CPNE4-206ENST00000505957 NUDCQ9Y266 331 aa14□□□□□ -0.17
CPNE4-206ENST00000505957 NBPF26B4DH59 902 aa13.99□□□□□ -0.17
CPNE4-206ENST00000505957 IARSP41252 1262 aaKnown RBP13.99□□□□□ -0.17
CPNE4-206ENST00000505957 EAPPQ56P03 285 aaPredicted RBP13.99□□□□□ -0.17
CPNE4-206ENST00000505957 NBPF10Q6P3W6 841 aaKnown RBP13.99□□□□□ -0.17
CPNE4-206ENST00000505957 NBPF15Q8N660 670 aa13.99□□□□□ -0.17
CPNE4-206ENST00000505957 PSMD1Q99460 953 aa13.99□□□□□ -0.17
CPNE4-206ENST00000505957 RASSF10A6NK89 507 aa13.98□□□□□ -0.17
CPNE4-206ENST00000505957 CC2D2BQ6DHV5 1058 aa13.98□□□□□ -0.17
CPNE4-206ENST00000505957 CNTROBQ8N137 903 aa13.98□□□□□ -0.17
CPNE4-206ENST00000505957 GPC2Q8N158 579 aa13.98□□□□□ -0.17
CPNE4-206ENST00000505957 SYNE4Q8N205 404 aa13.98□□□□□ -0.17
CPNE4-206ENST00000505957 CLEC11AQ9Y240 323 aa13.98□□□□□ -0.17
CPNE4-206ENST00000505957 ZNF521Q96K83 1311 aa13.97□□□□□ -0.17
CPNE4-206ENST00000505957 DEFB115Q30KQ5 88 aa13.97□□□□□ -0.17
CPNE4-206ENST00000505957 CRY2Q49AN0 593 aa13.97□□□□□ -0.17
CPNE4-206ENST00000505957 OLFM4Q6UX06 510 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms