RNA–Protein interactions for RNA: ENST00000505905.1

LIN54-205, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2

Gene LIN54, Length 810 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-205ENST00000505905 PLEKHM2Q8IWE5 1019 aa11.6□□□□□ -0.55
LIN54-205ENST00000505905 GPC6Q9Y625 555 aaPredicted RBP11.6□□□□□ -0.55
LIN54-205ENST00000505905 CLDN10P78369 228 aa11.59□□□□□ -0.55
LIN54-205ENST00000505905 ELOA3CA0A087WX78 387 aaPredicted RBP11.58□□□□□ -0.56
LIN54-205ENST00000505905 ELOA3DA6NLF2 546 aaPredicted RBP11.58□□□□□ -0.56
LIN54-205ENST00000505905 ELOA3BQ3SY89 546 aa11.58□□□□□ -0.56
LIN54-205ENST00000505905 SYT9Q86SS6 491 aa11.58□□□□□ -0.56
LIN54-205ENST00000505905 ELOA3Q8NG57 546 aa11.58□□□□□ -0.56
LIN54-205ENST00000505905 TPCN2Q8NHX9 752 aa11.58□□□□□ -0.56
LIN54-205ENST00000505905 USP17L3A6NCW0 530 aa11.57□□□□□ -0.56
LIN54-205ENST00000505905 USP17L4A6NCW7 530 aa11.57□□□□□ -0.56
LIN54-205ENST00000505905 USP17L2Q6R6M4 530 aa11.57□□□□□ -0.56
LIN54-205ENST00000505905 USP17L1Q7RTZ2 530 aa11.57□□□□□ -0.56
LIN54-205ENST00000505905 TRIM50Q86XT4 487 aa11.57□□□□□ -0.56
LIN54-205ENST00000505905 ZNF232Q9UNY5 417 aa11.57□□□□□ -0.56
LIN54-205ENST00000505905 SERTM1A2A2V5 107 aa11.56□□□□□ -0.56
LIN54-205ENST00000505905 SIN3BO75182 1162 aa11.56□□□□□ -0.56
LIN54-205ENST00000505905 HIRAP54198 1017 aaPredicted RBP11.56□□□□□ -0.56
LIN54-205ENST00000505905 SFSWAPQ12872 951 aaKnown RBP11.56□□□□□ -0.56
LIN54-205ENST00000505905 SLC30A3Q99726 388 aa11.56□□□□□ -0.56
LIN54-205ENST00000505905 PLVAPQ9BX97 442 aa11.56□□□□□ -0.56
LIN54-205ENST00000505905 ADARB2-AS1A8MUL3 147 aa11.55□□□□□ -0.56
LIN54-205ENST00000505905 ITGB7P26010 798 aa11.55□□□□□ -0.56
LIN54-205ENST00000505905 COL9A3Q14050 684 aaPredicted RBP11.55□□□□□ -0.56
LIN54-205ENST00000505905 WWC1Q8IX03 1113 aa11.55□□□□□ -0.56
LIN54-205ENST00000505905 TSPAN10Q9H1Z9 355 aaPredicted RBP11.55□□□□□ -0.56
LIN54-205ENST00000505905 DKK1O94907 266 aa11.54□□□□□ -0.56
LIN54-205ENST00000505905 CCDC102BQ68D86 513 aa11.54□□□□□ -0.56
LIN54-205ENST00000505905 STARD13Q9Y3M8 1113 aa11.54□□□□□ -0.56
LIN54-205ENST00000505905 C1orf53Q5VUE5 145 aa11.53□□□□□ -0.56
LIN54-205ENST00000505905 ATP9BO43861 1147 aa11.52□□□□□ -0.57
LIN54-205ENST00000505905 RAD21O60216 631 aa11.52□□□□□ -0.57
LIN54-205ENST00000505905 PSMA6P60900 246 aaKnown RBP11.52□□□□□ -0.57
LIN54-205ENST00000505905 HDGFL1Q5TGJ6 251 aa11.52□□□□□ -0.57
LIN54-205ENST00000505905 RHPN1Q8TCX5 695 aa11.52□□□□□ -0.57
LIN54-205ENST00000505905 TNFRSF25Q93038 417 aa11.52□□□□□ -0.57
LIN54-205ENST00000505905 M0R2N6 131 aa11.51□□□□□ -0.57
LIN54-205ENST00000505905 SPATA31C1P0DKV0 1188 aa11.51□□□□□ -0.57
LIN54-205ENST00000505905 ATP1A2P50993 1020 aa11.51□□□□□ -0.57
LIN54-205ENST00000505905 LARGE2Q8N3Y3 721 aa11.5□□□□□ -0.57
LIN54-205ENST00000505905 OGFOD1Q8N543 542 aa11.5□□□□□ -0.57
LIN54-205ENST00000505905 HSH2DQ96JZ2 352 aa11.5□□□□□ -0.57
LIN54-205ENST00000505905 C21orf2O43822 256 aa11.49□□□□□ -0.57
LIN54-205ENST00000505905 UBTFP17480 764 aaKnown RBP11.49□□□□□ -0.57
LIN54-205ENST00000505905 KCNQ4P56696 695 aa11.49□□□□□ -0.57
LIN54-205ENST00000505905 SPEM2Q0P670 501 aa11.49□□□□□ -0.57
LIN54-205ENST00000505905 FLIIQ13045 1269 aa11.49□□□□□ -0.57
LIN54-205ENST00000505905 SIX5Q8N196 739 aa11.49□□□□□ -0.57
LIN54-205ENST00000505905 ZNF280CQ8ND82 737 aa11.49□□□□□ -0.57
LIN54-205ENST00000505905 PHACTR1Q9C0D0 580 aa11.49□□□□□ -0.57
LIN54-205ENST00000505905 PRDM6Q9NQX0 595 aa11.49□□□□□ -0.57
LIN54-205ENST00000505905 HCN4Q9Y3Q4 1203 aa11.49□□□□□ -0.57
LIN54-205ENST00000505905 ALAS2P22557 587 aa11.48□□□□□ -0.57
LIN54-205ENST00000505905 Q8N3U1 123 aa11.48□□□□□ -0.57
LIN54-205ENST00000505905 TSEN2Q8NCE0 465 aaKnown RBP11.48□□□□□ -0.57
LIN54-205ENST00000505905 NEUROD4Q9HD90 331 aa11.48□□□□□ -0.57
LIN54-205ENST00000505905 MKRN1Q9UHC7 482 aaKnown RBP11.48□□□□□ -0.57
LIN54-205ENST00000505905 PALM3A6NDB9 673 aaPredicted RBP11.47□□□□□ -0.57
LIN54-205ENST00000505905 ALBP02768 609 aa11.47□□□□□ -0.57
LIN54-205ENST00000505905 TYRO3Q06418 890 aa11.47□□□□□ -0.57
LIN54-205ENST00000505905 DOC2BQ14184 412 aa11.47□□□□□ -0.57
LIN54-205ENST00000505905 SFI1A8K8P3 1242 aa11.46□□□□□ -0.57
LIN54-205ENST00000505905 M0R082 166 aa11.46□□□□□ -0.57
LIN54-205ENST00000505905 RAB44Q7Z6P3 723 aaPredicted RBP11.46□□□□□ -0.57
LIN54-205ENST00000505905 MICALL1Q8N3F8 863 aa11.46□□□□□ -0.57
LIN54-205ENST00000505905 ZNF417Q8TAU3 575 aa11.46□□□□□ -0.57
LIN54-205ENST00000505905 SUSD3Q96L08 255 aa11.46□□□□□ -0.57
LIN54-205ENST00000505905 ZNF587Q96SQ5 575 aaPredicted RBP11.46□□□□□ -0.57
LIN54-205ENST00000505905 BRD7Q9NPI1 651 aa11.46□□□□□ -0.57
LIN54-205ENST00000505905 C8orf86Q6ZUL3 223 aa11.45□□□□□ -0.58
LIN54-205ENST00000505905 ADH7P40394 386 aa11.44□□□□□ -0.58
LIN54-205ENST00000505905 GATA4P43694 442 aa11.44□□□□□ -0.58
LIN54-205ENST00000505905 C20orf204Q6ZNR8 217 aa11.44□□□□□ -0.58
LIN54-205ENST00000505905 ZNF594Q96JF6 807 aaPredicted RBP11.44□□□□□ -0.58
LIN54-205ENST00000505905 CEP63Q96MT8 703 aa11.44□□□□□ -0.58
LIN54-205ENST00000505905 NID1P14543 1247 aa11.43□□□□□ -0.58
LIN54-205ENST00000505905 ANKIB1Q9P2G1 1089 aa11.43□□□□□ -0.58
LIN54-205ENST00000505905 KCNH4Q9UQ05 1017 aa11.43□□□□□ -0.58
LIN54-205ENST00000505905 FAM229AH3BQW9 127 aa11.42□□□□□ -0.58
LIN54-205ENST00000505905 PPP1R12BO60237 982 aaPredicted RBP11.42□□□□□ -0.58
LIN54-205ENST00000505905 STAG2Q8N3U4 1231 aa11.42□□□□□ -0.58
LIN54-205ENST00000505905 FNBP4Q8N3X1 1017 aaPredicted RBP11.42□□□□□ -0.58
LIN54-205ENST00000505905 C2orf49Q9BVC5 232 aaPredicted RBP11.42□□□□□ -0.58
LIN54-205ENST00000505905 SPDYE3A6NKU9 549 aa11.41□□□□□ -0.58
LIN54-205ENST00000505905 SEMA6BQ9H3T3 888 aa11.41□□□□□ -0.58
LIN54-205ENST00000505905 RSPO4Q2I0M5 234 aaPredicted RBP11.4□□□□□ -0.58
LIN54-205ENST00000505905 PRRT3Q5FWE3 981 aa11.4□□□□□ -0.58
LIN54-205ENST00000505905 ALDH16A1Q8IZ83 802 aa11.4□□□□□ -0.58
LIN54-205ENST00000505905 CHMP3Q9Y3E7 222 aa11.4□□□□□ -0.58
LIN54-205ENST00000505905 NKAPLQ5M9Q1 402 aa11.39□□□□□ -0.59
LIN54-205ENST00000505905 MAFBQ9Y5Q3 323 aaPredicted RBP11.39□□□□□ -0.59
LIN54-205ENST00000505905 ATAD2Q6PL18 1390 aa11.39□□□□□ -0.59
LIN54-205ENST00000505905 NEUROD1Q13562 356 aa11.38□□□□□ -0.59
LIN54-205ENST00000505905 BTLAQ7Z6A9 289 aa11.38□□□□□ -0.59
LIN54-205ENST00000505905 TFIP11Q9UBB9 837 aaKnown RBP11.38□□□□□ -0.59
LIN54-205ENST00000505905 GLMNQ92990 594 aa11.37□□□□□ -0.59
LIN54-205ENST00000505905 TPSG1Q9NRR2 321 aa11.37□□□□□ -0.59
LIN54-205ENST00000505905 RASA1P20936 1047 aa11.36□□□□□ -0.59
LIN54-205ENST00000505905 SCG3Q8WXD2 468 aaKnown RBP11.36□□□□□ -0.59
LIN54-205ENST00000505905 CLUAP1Q96AJ1 413 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms