RNA–Protein interactions for RNA: ENST00000505591.1

COL25A1-206, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 3

Gene COL25A1, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-206ENST00000505591 HSPA1AP0DMV8 641 aaKnown RBP16.75■□□□□ 0.27
COL25A1-206ENST00000505591 HSPA1BP0DMV9 641 aaKnown RBP16.75■□□□□ 0.27
COL25A1-206ENST00000505591 CHADLQ6NUI6 762 aa16.75■□□□□ 0.27
COL25A1-206ENST00000505591 PRPF40BQ6NWY9 871 aaKnown RBP16.75■□□□□ 0.27
COL25A1-206ENST00000505591 CFAP53Q96M91 514 aa16.75■□□□□ 0.27
COL25A1-206ENST00000505591 ZNF652Q9Y2D9 606 aa16.75■□□□□ 0.27
COL25A1-206ENST00000505591 COL11A2P13942 1736 aaPredicted RBP16.75■□□□□ 0.27
COL25A1-206ENST00000505591 IQCA1LA6NCM1 817 aa16.74■□□□□ 0.27
COL25A1-206ENST00000505591 RGL2O15211 777 aa16.74■□□□□ 0.27
COL25A1-206ENST00000505591 CREBZFQ9NS37 354 aa16.74■□□□□ 0.27
COL25A1-206ENST00000505591 PRKAR2BP31323 418 aa16.73■□□□□ 0.27
COL25A1-206ENST00000505591 NBPF5PQ86XG9 351 aaPredicted RBP16.73■□□□□ 0.27
COL25A1-206ENST00000505591 NUDCQ9Y266 331 aa16.73■□□□□ 0.27
COL25A1-206ENST00000505591 SNRPA1P09661 255 aaKnown RBP16.72■□□□□ 0.27
COL25A1-206ENST00000505591 CCDC93Q567U6 631 aa16.72■□□□□ 0.27
COL25A1-206ENST00000505591 RTF1Q92541 710 aaKnown RBP16.72■□□□□ 0.27
COL25A1-206ENST00000505591 PHACTR3Q96KR7 559 aa16.72■□□□□ 0.27
COL25A1-206ENST00000505591 RSPH6AQ9H0K4 717 aa16.72■□□□□ 0.27
COL25A1-206ENST00000505591 BCORQ6W2J9 1755 aa16.72■□□□□ 0.27
COL25A1-206ENST00000505591 KCNQ3O43525 872 aa16.71■□□□□ 0.27
COL25A1-206ENST00000505591 CAPN15O75808 1086 aa16.71■□□□□ 0.27
COL25A1-206ENST00000505591 DDNO94850 711 aaPredicted RBP16.71■□□□□ 0.27
COL25A1-206ENST00000505591 NPR1P16066 1061 aa16.71■□□□□ 0.27
COL25A1-206ENST00000505591 CNGB1Q14028 1251 aaPredicted RBP16.71■□□□□ 0.27
COL25A1-206ENST00000505591 USP16Q9Y5T5 823 aa16.71■□□□□ 0.27
COL25A1-206ENST00000505591 ARFGEF2Q9Y6D5 1785 aa16.71■□□□□ 0.27
COL25A1-206ENST00000505591 SLX4Q8IY92 1834 aa16.7■□□□□ 0.26
COL25A1-206ENST00000505591 TPTE2Q6XPS3 522 aa16.7■□□□□ 0.26
COL25A1-206ENST00000505591 L3MBTL3Q96JM7 780 aaPredicted RBP16.7■□□□□ 0.26
COL25A1-206ENST00000505591 KLRG2A4D1S0 409 aaPredicted RBP16.69■□□□□ 0.26
COL25A1-206ENST00000505591 LDHDQ86WU2 507 aa16.69■□□□□ 0.26
COL25A1-206ENST00000505591 C7orf43Q8WVR3 580 aa16.69■□□□□ 0.26
COL25A1-206ENST00000505591 HTATSF1O43719 755 aaKnown RBP16.68■□□□□ 0.26
COL25A1-206ENST00000505591 FKBP4Q02790 459 aaKnown RBP eCLIP16.68■□□□□ 0.26
COL25A1-206ENST00000505591 RTKN2Q8IZC4 609 aa16.68■□□□□ 0.26
COL25A1-206ENST00000505591 POTEIP0CG38 1075 aa16.67■□□□□ 0.26
COL25A1-206ENST00000505591 POTEJP0CG39 1038 aa16.67■□□□□ 0.26
COL25A1-206ENST00000505591 PIP4K2AP48426 406 aaPredicted RBP16.67■□□□□ 0.26
COL25A1-206ENST00000505591 TAF1DQ9H5J8 278 aaPredicted RBP16.67■□□□□ 0.26
COL25A1-206ENST00000505591 MKRN1Q9UHC7 482 aaKnown RBP16.67■□□□□ 0.26
COL25A1-206ENST00000505591 NIP7Q9Y221 180 aaKnown RBP eCLIP16.67■□□□□ 0.26
COL25A1-206ENST00000505591 SCN4AP35499 1836 aa16.66■□□□□ 0.26
COL25A1-206ENST00000505591 U2AF1L5P0DN76 240 aaPredicted RBP16.66■□□□□ 0.26
COL25A1-206ENST00000505591 ALDH1B1P30837 517 aa16.66■□□□□ 0.26
COL25A1-206ENST00000505591 U2AF1Q01081 240 aaKnown RBP eCLIP16.66■□□□□ 0.26
COL25A1-206ENST00000505591 CACNA1SQ13698 1873 aa16.66■□□□□ 0.26
COL25A1-206ENST00000505591 MCM10Q7L590 875 aa16.66■□□□□ 0.26
COL25A1-206ENST00000505591 PASKQ96RG2 1323 aa16.66■□□□□ 0.26
COL25A1-206ENST00000505591 CNTNAP1P78357 1384 aa16.65■□□□□ 0.26
COL25A1-206ENST00000505591 PRAMEF22A3QJZ6 481 aa16.65■□□□□ 0.26
COL25A1-206ENST00000505591 NBPF26B4DH59 902 aa16.64■□□□□ 0.25
COL25A1-206ENST00000505591 GTF2E1P29083 439 aaPredicted RBP16.64■□□□□ 0.25
COL25A1-206ENST00000505591 NBPF10Q6P3W6 841 aaKnown RBP16.64■□□□□ 0.25
COL25A1-206ENST00000505591 NBPF15Q8N660 670 aa16.64■□□□□ 0.25
COL25A1-206ENST00000505591 ZNF277Q9NRM2 450 aaPredicted RBP16.64■□□□□ 0.25
COL25A1-206ENST00000505591 HACL1Q9UJ83 578 aa16.64■□□□□ 0.25
COL25A1-206ENST00000505591 TMEM88BA6NKF7 163 aa16.63■□□□□ 0.25
COL25A1-206ENST00000505591 TAF7Q15545 349 aaPredicted RBP16.63■□□□□ 0.25
COL25A1-206ENST00000505591 PNMA8AQ86V59 439 aaPredicted RBP16.63■□□□□ 0.25
COL25A1-206ENST00000505591 NYXQ9GZU5 481 aa16.63■□□□□ 0.25
COL25A1-206ENST00000505591 PPP2R1AP30153 589 aa16.62■□□□□ 0.25
COL25A1-206ENST00000505591 IARSP41252 1262 aaKnown RBP16.62■□□□□ 0.25
COL25A1-206ENST00000505591 EAPPQ56P03 285 aaPredicted RBP16.62■□□□□ 0.25
COL25A1-206ENST00000505591 CC2D2BQ6DHV5 1058 aa16.62■□□□□ 0.25
COL25A1-206ENST00000505591 CLEC11AQ9Y240 323 aa16.62■□□□□ 0.25
COL25A1-206ENST00000505591 FAM177BA6PVY3 158 aa16.61■□□□□ 0.25
COL25A1-206ENST00000505591 FZD9O00144 591 aa16.61■□□□□ 0.25
COL25A1-206ENST00000505591 ITGBL1O95965 494 aaPredicted RBP16.61■□□□□ 0.25
COL25A1-206ENST00000505591 NEFMP07197 916 aa16.61■□□□□ 0.25
COL25A1-206ENST00000505591 EPHX2P34913 555 aa16.61■□□□□ 0.25
COL25A1-206ENST00000505591 GPC2Q8N158 579 aa16.61■□□□□ 0.25
COL25A1-206ENST00000505591 PNISRQ8TF01 805 aaKnown RBP16.61■□□□□ 0.25
COL25A1-206ENST00000505591 AIDAQ96BJ3 306 aa16.61■□□□□ 0.25
COL25A1-206ENST00000505591 PSMD1Q99460 953 aa16.61■□□□□ 0.25
COL25A1-206ENST00000505591 PRDM10Q9NQV6 1147 aa16.61■□□□□ 0.25
COL25A1-206ENST00000505591 ZNF541Q9H0D2 1346 aa16.61■□□□□ 0.25
COL25A1-206ENST00000505591 ERVV-1B6SEH8 477 aa16.6■□□□□ 0.25
COL25A1-206ENST00000505591 DCTN1Q14203 1278 aa16.6■□□□□ 0.25
COL25A1-206ENST00000505591 HLFQ16534 295 aa16.6■□□□□ 0.25
COL25A1-206ENST00000505591 GRIPAP1Q4V328 841 aa16.6■□□□□ 0.25
COL25A1-206ENST00000505591 SYNE4Q8N205 404 aa16.6■□□□□ 0.25
COL25A1-206ENST00000505591 JDP2Q8WYK2 163 aa16.6■□□□□ 0.25
COL25A1-206ENST00000505591 CRY2Q49AN0 593 aa16.59■□□□□ 0.25
COL25A1-206ENST00000505591 OLFM4Q6UX06 510 aa16.59■□□□□ 0.25
COL25A1-206ENST00000505591 FOXN1O15353 648 aa16.58■□□□□ 0.24
COL25A1-206ENST00000505591 CTCFP49711 727 aaPredicted RBP16.58■□□□□ 0.24
COL25A1-206ENST00000505591 VEGFBP49765 207 aa16.58■□□□□ 0.24
COL25A1-206ENST00000505591 KIF6Q6ZMV9 814 aa16.58■□□□□ 0.24
COL25A1-206ENST00000505591 RNF123Q5XPI4 1314 aa16.58■□□□□ 0.24
COL25A1-206ENST00000505591 RIC1Q4ADV7 1423 aa16.57■□□□□ 0.24
COL25A1-206ENST00000505591 IBTKQ9P2D0 1353 aaPredicted RBP16.57■□□□□ 0.24
COL25A1-206ENST00000505591 MAP3K15Q6ZN16 1313 aa16.57■□□□□ 0.24
COL25A1-206ENST00000505591 EIF6P56537 245 aaKnown RBP16.57■□□□□ 0.24
COL25A1-206ENST00000505591 CNTROBQ8N137 903 aa16.57■□□□□ 0.24
COL25A1-206ENST00000505591 RPGRQ92834 1020 aaKnown RBP16.57■□□□□ 0.24
COL25A1-206ENST00000505591 LAMB4A4D0S4 1761 aa16.56■□□□□ 0.24
COL25A1-206ENST00000505591 ADAMTSL1Q8N6G6 1762 aa16.56■□□□□ 0.24
COL25A1-206ENST00000505591 SNED1Q8TER0 1413 aa16.56■□□□□ 0.24
COL25A1-206ENST00000505591 RASSF10A6NK89 507 aa16.56■□□□□ 0.24
COL25A1-206ENST00000505591 MIS18AQ9NYP9 233 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms