RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 ANAPC15P60006 121 aa23.72■■□□□ 1.39
SDHA-206ENST00000505555 SCN11AQ9UI33 1791 aa23.72■■□□□ 1.39
SDHA-206ENST00000505555 TTC5Q8N0Z6 440 aa23.72■■□□□ 1.39
SDHA-206ENST00000505555 UTYO14607 1347 aa23.72■■□□□ 1.39
SDHA-206ENST00000505555 C5P01031 1676 aa23.72■■□□□ 1.39
SDHA-206ENST00000505555 SGSM2O43147 1006 aa23.71■■□□□ 1.39
SDHA-206ENST00000505555 LARP1Q6PKG0 1096 aaKnown RBP23.71■■□□□ 1.39
SDHA-206ENST00000505555 CWC27Q6UX04 472 aaKnown RBP23.71■■□□□ 1.39
SDHA-206ENST00000505555 MYD88Q99836 296 aa23.71■■□□□ 1.39
SDHA-206ENST00000505555 HDAC5Q9UQL6 1122 aa23.71■■□□□ 1.39
SDHA-206ENST00000505555 JARID2Q92833 1246 aaPredicted RBP23.71■■□□□ 1.39
SDHA-206ENST00000505555 USP42Q9H9J4 1324 aaKnown RBP23.71■■□□□ 1.39
SDHA-206ENST00000505555 NEURL1BA8MQ27 555 aa23.7■■□□□ 1.38
SDHA-206ENST00000505555 GLRX3O76003 335 aaKnown RBP23.7■■□□□ 1.38
SDHA-206ENST00000505555 IFIT2P09913 472 aaKnown RBP23.7■■□□□ 1.38
SDHA-206ENST00000505555 SKOR2Q2VWA4 1001 aaPredicted RBP23.7■■□□□ 1.38
SDHA-206ENST00000505555 MCTP1Q6DN14 999 aa23.7■■□□□ 1.38
SDHA-206ENST00000505555 ZDHHC9Q9Y397 364 aa23.7■■□□□ 1.38
SDHA-206ENST00000505555 TTC41PQ6P2S7 1318 aa23.7■■□□□ 1.38
SDHA-206ENST00000505555 SASH1O94885 1247 aa23.69■■□□□ 1.38
SDHA-206ENST00000505555 SNRPA1P09661 255 aaKnown RBP23.69■■□□□ 1.38
SDHA-206ENST00000505555 HSPA4P34932 840 aa23.69■■□□□ 1.38
SDHA-206ENST00000505555 AACSQ86V21 672 aa23.69■■□□□ 1.38
SDHA-206ENST00000505555 KLHDC4Q8TBB5 520 aa23.69■■□□□ 1.38
SDHA-206ENST00000505555 SIL1Q9H173 461 aa23.69■■□□□ 1.38
SDHA-206ENST00000505555 GOLGA6L22H0YM25 854 aa23.69■■□□□ 1.38
SDHA-206ENST00000505555 NEXNQ0ZGT2 675 aa23.69■■□□□ 1.38
SDHA-206ENST00000505555 BRINP3Q76B58 766 aa23.69■■□□□ 1.38
SDHA-206ENST00000505555 PANK2Q9BZ23 570 aa23.69■■□□□ 1.38
SDHA-206ENST00000505555 ECHDC1Q9NTX5 307 aa23.69■■□□□ 1.38
SDHA-206ENST00000505555 CRYBG1Q9Y4K1 1723 aa23.69■■□□□ 1.38
SDHA-206ENST00000505555 CABP4P57796 275 aa23.68■■□□□ 1.38
SDHA-206ENST00000505555 ERC1Q8IUD2 1116 aa23.68■■□□□ 1.38
SDHA-206ENST00000505555 GCKRQ14397 625 aa23.68■■□□□ 1.38
SDHA-206ENST00000505555 EPHA10Q5JZY3 1008 aa23.68■■□□□ 1.38
SDHA-206ENST00000505555 ANKRD13DQ6ZTN6 518 aa23.68■■□□□ 1.38
SDHA-206ENST00000505555 LRP10Q7Z4F1 713 aa23.68■■□□□ 1.38
SDHA-206ENST00000505555 METTL22Q9BUU2 404 aaPredicted RBP23.68■■□□□ 1.38
SDHA-206ENST00000505555 PTMSP20962 102 aa23.67■■□□□ 1.38
SDHA-206ENST00000505555 G3BP1Q13283 466 aaKnown RBP eCLIP23.67■■□□□ 1.385e-8■■□□□ 13.5
SDHA-206ENST00000505555 LSG1Q9H089 658 aaKnown RBP23.67■■□□□ 1.38
SDHA-206ENST00000505555 MCM2P49736 904 aa23.67■■□□□ 1.38
SDHA-206ENST00000505555 FOXD4L5Q5VV16 416 aaPredicted RBP23.67■■□□□ 1.38
SDHA-206ENST00000505555 FOXD4L4Q8WXT5 416 aaPredicted RBP23.67■■□□□ 1.38
SDHA-206ENST00000505555 CHAMP1Q96JM3 812 aa23.67■■□□□ 1.38
SDHA-206ENST00000505555 FMNL2Q96PY5 1086 aa23.67■■□□□ 1.38
SDHA-206ENST00000505555 CCDC8Q9H0W5 538 aaPredicted RBP23.67■■□□□ 1.38
SDHA-206ENST00000505555 EAF2Q96CJ1 260 aaPredicted RBP23.66■■□□□ 1.38
SDHA-206ENST00000505555 RAD50Q92878 1312 aa23.66■■□□□ 1.38
SDHA-206ENST00000505555 IL17RAQ96F46 866 aa23.65■■□□□ 1.38
SDHA-206ENST00000505555 CPDO75976 1380 aa23.65■■□□□ 1.38
SDHA-206ENST00000505555 GAS2L3Q86XJ1 694 aa23.65■■□□□ 1.38
SDHA-206ENST00000505555 DDX49Q9Y6V7 483 aaKnown RBP23.65■■□□□ 1.38
SDHA-206ENST00000505555 DIAPH3Q9NSV4 1193 aa23.64■■□□□ 1.38
SDHA-206ENST00000505555 CUL4AQ13619 759 aa23.64■■□□□ 1.37
SDHA-206ENST00000505555 RASEFQ8IZ41 740 aa23.64■■□□□ 1.37
SDHA-206ENST00000505555 GPATCH3Q96I76 525 aa23.64■■□□□ 1.37
SDHA-206ENST00000505555 PRDM11Q9NQV5 511 aa23.64■■□□□ 1.37
SDHA-206ENST00000505555 TLR7Q9NYK1 1049 aaKnown RBP23.64■■□□□ 1.37
SDHA-206ENST00000505555 SNX14Q9Y5W7 946 aa23.64■■□□□ 1.37
SDHA-206ENST00000505555 KIAA1211Q6ZU35 1233 aa23.63■■□□□ 1.37
SDHA-206ENST00000505555 FAM43AQ8N2R8 423 aa23.63■■□□□ 1.37
SDHA-206ENST00000505555 ATP5J2-PTCD1G3V325 749 aa23.63■■□□□ 1.37
SDHA-206ENST00000505555 EPB41L2O43491 1005 aaKnown RBP23.63■■□□□ 1.37
SDHA-206ENST00000505555 PTCD1O75127 700 aaKnown RBP23.63■■□□□ 1.37
SDHA-206ENST00000505555 TOM1L2Q6ZVM7 507 aa23.63■■□□□ 1.37
SDHA-206ENST00000505555 MRE11P49959 708 aa23.62■■□□□ 1.37
SDHA-206ENST00000505555 GRPEL1Q9HAV7 217 aa23.62■■□□□ 1.37
SDHA-206ENST00000505555 LMBRD1Q9NUN5 540 aa23.61■■□□□ 1.37
SDHA-206ENST00000505555 MRC1P22897 1456 aa23.61■■□□□ 1.37
SDHA-206ENST00000505555 PTH1RQ03431 593 aa23.61■■□□□ 1.37
SDHA-206ENST00000505555 ABCC6O95255 1503 aa23.6■■□□□ 1.37
SDHA-206ENST00000505555 KLHL40Q2TBA0 621 aa23.6■■□□□ 1.37
SDHA-206ENST00000505555 UBE3BQ7Z3V4 1068 aa23.6■■□□□ 1.37
SDHA-206ENST00000505555 LARP6Q9BRS8 491 aaKnown RBP23.6■■□□□ 1.37
SDHA-206ENST00000505555 PRPF40AO75400 957 aaKnown RBP23.59■■□□□ 1.37
SDHA-206ENST00000505555 NCLP19338 710 aaKnown RBP23.59■■□□□ 1.37
SDHA-206ENST00000505555 ZCRB1Q8TBF4 217 aaKnown RBP23.59■■□□□ 1.37
SDHA-206ENST00000505555 EVI5LQ96CN4 794 aa23.59■■□□□ 1.37
SDHA-206ENST00000505555 WDR17Q8IZU2 1322 aa23.58■■□□□ 1.37
SDHA-206ENST00000505555 PKD1L3Q7Z443 1732 aa23.58■■□□□ 1.37
SDHA-206ENST00000505555 CPA1P15085 419 aa23.58■■□□□ 1.37
SDHA-206ENST00000505555 BOLA2Q9H3K6 86 aa23.58■■□□□ 1.37
SDHA-206ENST00000505555 SLAIN2Q9P270 581 aa23.58■■□□□ 1.37
SDHA-206ENST00000505555 RUFY2Q8WXA3 655 aa23.57■■□□□ 1.36
SDHA-206ENST00000505555 INTS4Q96HW7 963 aaKnown RBP23.57■■□□□ 1.36
SDHA-206ENST00000505555 XIRP1Q702N8 1843 aaKnown RBP23.57■■□□□ 1.36
SDHA-206ENST00000505555 FAM227BQ96M60 508 aa23.57■■□□□ 1.36
SDHA-206ENST00000505555 A0A087WZG4 1122 aa23.56■■□□□ 1.36
SDHA-206ENST00000505555 NBPF26B4DH59 902 aa23.56■■□□□ 1.36
SDHA-206ENST00000505555 NBPF14Q5TI25 921 aa23.56■■□□□ 1.36
SDHA-206ENST00000505555 NBPF10Q6P3W6 841 aaKnown RBP23.56■■□□□ 1.36
SDHA-206ENST00000505555 NBPF15Q8N660 670 aa23.56■■□□□ 1.36
SDHA-206ENST00000505555 DDX54Q8TDD1 881 aaKnown RBP23.56■■□□□ 1.36
SDHA-206ENST00000505555 BRD1O95696 1058 aa23.55■■□□□ 1.36
SDHA-206ENST00000505555 TTC14Q96N46 770 aa23.55■■□□□ 1.36
SDHA-206ENST00000505555 RFX5P48382 616 aaPredicted RBP23.55■■□□□ 1.36
SDHA-206ENST00000505555 AK2P54819 239 aa23.55■■□□□ 1.36
SDHA-206ENST00000505555 PRPF40BQ6NWY9 871 aaKnown RBP23.55■■□□□ 1.36
SDHA-206ENST00000505555 STRN4Q9NRL3 753 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms