RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 SPATA31A7Q8IWB4 1347 aa16.27■□□□□ 0.19
CCSER1-205ENST00000505073 IGKV5-2P06315 115 aa16.27■□□□□ 0.19
CCSER1-205ENST00000505073 ANKRD13DQ6ZTN6 518 aa16.27■□□□□ 0.19
CCSER1-205ENST00000505073 SYTL4Q96C24 671 aaPredicted RBP16.27■□□□□ 0.19
CCSER1-205ENST00000505073 C8orf37Q96NL8 207 aa16.27■□□□□ 0.19
CCSER1-205ENST00000505073 MYD88Q99836 296 aa16.27■□□□□ 0.19
CCSER1-205ENST00000505073 SLIT2O94813 1529 aa16.27■□□□□ 0.19
CCSER1-205ENST00000505073 ITGB4P16144 1822 aa16.27■□□□□ 0.19
CCSER1-205ENST00000505073 PLEKHM2Q8IWE5 1019 aa16.26■□□□□ 0.19
CCSER1-205ENST00000505073 GZF1Q9H116 711 aaPredicted RBP16.26■□□□□ 0.19
CCSER1-205ENST00000505073 ATG3Q9NT62 314 aa16.26■□□□□ 0.19
CCSER1-205ENST00000505073 DDB1Q16531 1140 aa16.26■□□□□ 0.19
CCSER1-205ENST00000505073 NAP1L5Q96NT1 182 aaPredicted RBP16.26■□□□□ 0.19
CCSER1-205ENST00000505073 THRAP3Q9Y2W1 955 aaKnown RBP16.26■□□□□ 0.19
CCSER1-205ENST00000505073 JCADQ9P266 1359 aa16.26■□□□□ 0.19
CCSER1-205ENST00000505073 METTL22Q9BUU2 404 aaPredicted RBP16.25■□□□□ 0.19
CCSER1-205ENST00000505073 TRAK2O60296 914 aa16.25■□□□□ 0.19
CCSER1-205ENST00000505073 MRE11P49959 708 aa16.25■□□□□ 0.19
CCSER1-205ENST00000505073 SPRYD3Q8NCJ5 442 aa16.25■□□□□ 0.19
CCSER1-205ENST00000505073 CERKQ8TCT0 537 aa16.25■□□□□ 0.19
CCSER1-205ENST00000505073 SSH3Q8TE77 659 aa16.25■□□□□ 0.19
CCSER1-205ENST00000505073 NGLY1Q96IV0 654 aa16.25■□□□□ 0.19
CCSER1-205ENST00000505073 RBM42Q9BTD8 480 aaKnown RBP16.25■□□□□ 0.19
CCSER1-205ENST00000505073 CDCA7Q9BWT1 371 aaPredicted RBP16.25■□□□□ 0.19
CCSER1-205ENST00000505073 SRGAP3O43295 1099 aa16.24■□□□□ 0.19
CCSER1-205ENST00000505073 NEXNQ0ZGT2 675 aa16.24■□□□□ 0.19
CCSER1-205ENST00000505073 NEURL1BA8MQ27 555 aa16.24■□□□□ 0.19
CCSER1-205ENST00000505073 GRM8O00222 908 aa16.24■□□□□ 0.19
CCSER1-205ENST00000505073 PRIM1P49642 420 aaKnown RBP16.24■□□□□ 0.19
CCSER1-205ENST00000505073 GLIPR1L2Q4G1C9 344 aa16.24■□□□□ 0.19
CCSER1-205ENST00000505073 BMP2KLQ5H9B9 411 aa16.24■□□□□ 0.19
CCSER1-205ENST00000505073 TTLL7Q6ZT98 887 aa16.24■□□□□ 0.19
CCSER1-205ENST00000505073 NWD2Q9ULI1 1742 aa16.24■□□□□ 0.19
CCSER1-205ENST00000505073 ERBB4Q15303 1308 aa16.24■□□□□ 0.19
CCSER1-205ENST00000505073 A0A0G2JS52 829 aa16.23■□□□□ 0.19
CCSER1-205ENST00000505073 POLA2Q14181 598 aa16.23■□□□□ 0.19
CCSER1-205ENST00000505073 DNAJC10Q8IXB1 793 aa16.23■□□□□ 0.19
CCSER1-205ENST00000505073 C22orf23Q9BZE7 217 aa16.23■□□□□ 0.19
CCSER1-205ENST00000505073 BCL9O00512 1426 aa16.23■□□□□ 0.19
CCSER1-205ENST00000505073 UNC5CLQ8IV45 518 aa16.23■□□□□ 0.19
CCSER1-205ENST00000505073 IBTKQ9P2D0 1353 aaPredicted RBP16.22■□□□□ 0.19
CCSER1-205ENST00000505073 SUCLG2Q96I99 432 aa16.22■□□□□ 0.19
CCSER1-205ENST00000505073 ATP5J2-PTCD1G3V325 749 aa16.22■□□□□ 0.19
CCSER1-205ENST00000505073 GSPT1P15170 499 aaKnown RBP16.22■□□□□ 0.19
CCSER1-205ENST00000505073 MARCH10Q8NA82 808 aaPredicted RBP16.22■□□□□ 0.19
CCSER1-205ENST00000505073 JARID2Q92833 1246 aaPredicted RBP16.22■□□□□ 0.19
CCSER1-205ENST00000505073 LRRCC1Q9C099 1032 aa16.22■□□□□ 0.19
CCSER1-205ENST00000505073 SURF6O75683 361 aaKnown RBP16.22■□□□□ 0.19
CCSER1-205ENST00000505073 GCKRQ14397 625 aa16.22■□□□□ 0.19
CCSER1-205ENST00000505073 PLBD2Q8NHP8 589 aa16.22■□□□□ 0.19
CCSER1-205ENST00000505073 ACSBG1Q96GR2 724 aa16.22■□□□□ 0.19
CCSER1-205ENST00000505073 DDX11L8A8MPP1 907 aa16.21■□□□□ 0.19
CCSER1-205ENST00000505073 KAZALD1Q96I82 304 aa16.21■□□□□ 0.19
CCSER1-205ENST00000505073 LRP6O75581 1613 aa16.21■□□□□ 0.19
CCSER1-205ENST00000505073 FAM98CQ17RN3 349 aaKnown RBP16.21■□□□□ 0.18
CCSER1-205ENST00000505073 BARGINQ6ZT62 677 aa16.21■□□□□ 0.18
CCSER1-205ENST00000505073 SLC4A9Q96Q91 983 aa16.21■□□□□ 0.18
CCSER1-205ENST00000505073 ISY1Q9ULR0 285 aaKnown RBP16.21■□□□□ 0.18
CCSER1-205ENST00000505073 ZNF330Q9Y3S2 320 aaPredicted RBP16.21■□□□□ 0.18
CCSER1-205ENST00000505073 ARFGEF2Q9Y6D5 1785 aa16.2■□□□□ 0.18
CCSER1-205ENST00000505073 UTYO14607 1347 aa16.2■□□□□ 0.18
CCSER1-205ENST00000505073 DOT1LQ8TEK3 1739 aa16.2■□□□□ 0.18
CCSER1-205ENST00000505073 MFAP1P55081 439 aaKnown RBP16.2■□□□□ 0.18
CCSER1-205ENST00000505073 TTC22Q5TAA0 569 aa16.2■□□□□ 0.18
CCSER1-205ENST00000505073 ZBTB3Q9H5J0 574 aa16.2■□□□□ 0.18
CCSER1-205ENST00000505073 BICC1Q9H694 974 aaKnown RBP16.2■□□□□ 0.18
CCSER1-205ENST00000505073 IL1RAPL2Q9NP60 686 aa16.2■□□□□ 0.18
CCSER1-205ENST00000505073 BCL9LQ86UU0 1499 aa16.2■□□□□ 0.18
CCSER1-205ENST00000505073 HSCBQ8IWL3 235 aa16.19■□□□□ 0.18
CCSER1-205ENST00000505073 VSIG10Q8N0Z9 540 aa16.19■□□□□ 0.18
CCSER1-205ENST00000505073 GRPEL1Q9HAV7 217 aa16.19■□□□□ 0.18
CCSER1-205ENST00000505073 TSHZ3Q63HK5 1081 aa16.19■□□□□ 0.18
CCSER1-205ENST00000505073 HSP90AA1P07900 732 aaKnown RBP16.18■□□□□ 0.18
CCSER1-205ENST00000505073 MTX1Q13505 466 aa16.18■□□□□ 0.18
CCSER1-205ENST00000505073 TEX13AQ9BXU3 409 aaPredicted RBP16.18■□□□□ 0.18
CCSER1-205ENST00000505073 PA2G4Q9UQ80 394 aaKnown RBP16.18■□□□□ 0.18
CCSER1-205ENST00000505073 HDAC5Q9UQL6 1122 aa16.18■□□□□ 0.18
CCSER1-205ENST00000505073 AFDNP55196 1824 aaKnown RBP16.18■□□□□ 0.18
CCSER1-205ENST00000505073 RRP9O43818 475 aaKnown RBP16.17■□□□□ 0.18
CCSER1-205ENST00000505073 HSPA1LP34931 641 aa16.17■□□□□ 0.18
CCSER1-205ENST00000505073 VPS72Q15906 364 aa16.17■□□□□ 0.18
CCSER1-205ENST00000505073 EPHA10Q5JZY3 1008 aa16.17■□□□□ 0.18
CCSER1-205ENST00000505073 STARD3NLO95772 234 aa16.17■□□□□ 0.18
CCSER1-205ENST00000505073 PDE1AP54750 535 aa16.17■□□□□ 0.18
CCSER1-205ENST00000505073 UBE3BQ7Z3V4 1068 aa16.16■□□□□ 0.18
CCSER1-205ENST00000505073 SPATA31A6Q5VVP1 1343 aa16.16■□□□□ 0.18
CCSER1-205ENST00000505073 A0A087WZG4 1122 aa16.16■□□□□ 0.18
CCSER1-205ENST00000505073 RAB11FIP3O75154 756 aa16.16■□□□□ 0.18
CCSER1-205ENST00000505073 TBC1D9Q6ZT07 1266 aa16.16■□□□□ 0.18
CCSER1-205ENST00000505073 FNBP4Q8N3X1 1017 aaPredicted RBP16.16■□□□□ 0.18
CCSER1-205ENST00000505073 RHPN1Q8TCX5 695 aa16.16■□□□□ 0.18
CCSER1-205ENST00000505073 USP21Q9UK80 565 aa16.16■□□□□ 0.18
CCSER1-205ENST00000505073 SALL3Q9BXA9 1300 aa16.15■□□□□ 0.18
CCSER1-205ENST00000505073 OS9Q13438 667 aaPredicted RBP16.15■□□□□ 0.18
CCSER1-205ENST00000505073 CYP19A1P11511 503 aaPredicted RBP16.15■□□□□ 0.18
CCSER1-205ENST00000505073 DDIT3P35638 169 aa16.15■□□□□ 0.18
CCSER1-205ENST00000505073 HSP90AA2PQ14568 343 aaPredicted RBP16.15■□□□□ 0.18
CCSER1-205ENST00000505073 NUTM1Q86Y26 1132 aa16.15■□□□□ 0.18
CCSER1-205ENST00000505073 NUP188Q5SRE5 1749 aa16.15■□□□□ 0.18
CCSER1-205ENST00000505073 ESPNB1AK53 854 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms