RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 MYD88Q99836 296 aa18.86■□□□□ 0.61
SNCAIP-207ENST00000504884 TTC41PQ6P2S7 1318 aa18.86■□□□□ 0.61
SNCAIP-207ENST00000504884 USP42Q9H9J4 1324 aaKnown RBP18.86■□□□□ 0.61
SNCAIP-207ENST00000504884 HSP90AA1P07900 732 aaKnown RBP18.86■□□□□ 0.61
SNCAIP-207ENST00000504884 GSE1Q14687 1217 aa18.86■□□□□ 0.61
SNCAIP-207ENST00000504884 BICC1Q9H694 974 aaKnown RBP18.86■□□□□ 0.61
SNCAIP-207ENST00000504884 TUBGCP6Q96RT7 1819 aa18.86■□□□□ 0.61
SNCAIP-207ENST00000504884 NHSL1Q5SYE7 1610 aa18.85■□□□□ 0.61
SNCAIP-207ENST00000504884 EPB41L2O43491 1005 aaKnown RBP18.85■□□□□ 0.61
SNCAIP-207ENST00000504884 DDX54Q8TDD1 881 aaKnown RBP18.85■□□□□ 0.61
SNCAIP-207ENST00000504884 UNC5CLQ8IV45 518 aa18.84■□□□□ 0.61
SNCAIP-207ENST00000504884 ABCA3Q99758 1704 aa18.84■□□□□ 0.61
SNCAIP-207ENST00000504884 MCCP23508 829 aa18.84■□□□□ 0.61
SNCAIP-207ENST00000504884 G3BP1Q13283 466 aaKnown RBP eCLIP18.84■□□□□ 0.61
SNCAIP-207ENST00000504884 PLBD2Q8NHP8 589 aa18.84■□□□□ 0.61
SNCAIP-207ENST00000504884 ST18O60284 1047 aa18.83■□□□□ 0.6
SNCAIP-207ENST00000504884 GLRX3O76003 335 aaKnown RBP18.83■□□□□ 0.6
SNCAIP-207ENST00000504884 CNTROBQ8N137 903 aa18.83■□□□□ 0.6
SNCAIP-207ENST00000504884 PA2G4Q9UQ80 394 aaKnown RBP18.83■□□□□ 0.6
SNCAIP-207ENST00000504884 GPATCH3Q96I76 525 aa18.82■□□□□ 0.6
SNCAIP-207ENST00000504884 IFIT2P09913 472 aaKnown RBP18.82■□□□□ 0.6
SNCAIP-207ENST00000504884 MCM4P33991 863 aa18.81■□□□□ 0.6
SNCAIP-207ENST00000504884 PIP4K2AP48426 406 aaPredicted RBP18.81■□□□□ 0.6
SNCAIP-207ENST00000504884 ECHDC1Q9NTX5 307 aa18.81■□□□□ 0.6
SNCAIP-207ENST00000504884 ANAPC15P60006 121 aa18.8■□□□□ 0.6
SNCAIP-207ENST00000504884 ANO2Q9NQ90 1003 aa18.8■□□□□ 0.6
SNCAIP-207ENST00000504884 COL15A1P39059 1388 aa18.8■□□□□ 0.6
SNCAIP-207ENST00000504884 NBPF26B4DH59 902 aa18.79■□□□□ 0.6
SNCAIP-207ENST00000504884 SASH1O94885 1247 aa18.79■□□□□ 0.6
SNCAIP-207ENST00000504884 NBPF14Q5TI25 921 aa18.79■□□□□ 0.6
SNCAIP-207ENST00000504884 NBPF10Q6P3W6 841 aaKnown RBP18.79■□□□□ 0.6
SNCAIP-207ENST00000504884 NBPF15Q8N660 670 aa18.79■□□□□ 0.6
SNCAIP-207ENST00000504884 BTG4Q9NY30 223 aa18.79■□□□□ 0.6
SNCAIP-207ENST00000504884 LAMB4A4D0S4 1761 aa18.79■□□□□ 0.6
SNCAIP-207ENST00000504884 MAP4K4O95819 1239 aaPredicted RBP18.78■□□□□ 0.6
SNCAIP-207ENST00000504884 IL27Q8NEV9 243 aa18.78■□□□□ 0.6
SNCAIP-207ENST00000504884 GLI3P10071 1580 aa18.78■□□□□ 0.6
SNCAIP-207ENST00000504884 AACSQ86V21 672 aa18.77■□□□□ 0.6
SNCAIP-207ENST00000504884 IL17RAQ96F46 866 aa18.77■□□□□ 0.6
SNCAIP-207ENST00000504884 A0A087WZG4 1122 aa18.77■□□□□ 0.6
SNCAIP-207ENST00000504884 PTCD1O75127 700 aaKnown RBP18.77■□□□□ 0.6
SNCAIP-207ENST00000504884 RAB3GAP1Q15042 981 aa18.77■□□□□ 0.6
SNCAIP-207ENST00000504884 RABL6Q3YEC7 729 aaPredicted RBP18.77■□□□□ 0.6
SNCAIP-207ENST00000504884 EPHA10Q5JZY3 1008 aa18.77■□□□□ 0.6
SNCAIP-207ENST00000504884 COPRSQ9NQ92 184 aa18.77■□□□□ 0.6
SNCAIP-207ENST00000504884 TMOD3Q9NYL9 352 aa18.77■□□□□ 0.6
SNCAIP-207ENST00000504884 UBR2Q8IWV8 1755 aa18.76■□□□□ 0.59
SNCAIP-207ENST00000504884 ATP5J2-PTCD1G3V325 749 aa18.76■□□□□ 0.59
SNCAIP-207ENST00000504884 MCM2P49736 904 aa18.76■□□□□ 0.59
SNCAIP-207ENST00000504884 KCPQ6ZWJ8 1503 aa18.76■□□□□ 0.59
SNCAIP-207ENST00000504884 SGSM2O43147 1006 aa18.75■□□□□ 0.59
SNCAIP-207ENST00000504884 A1BGP04217 495 aa18.75■□□□□ 0.59
SNCAIP-207ENST00000504884 UBE3BQ7Z3V4 1068 aa18.75■□□□□ 0.59
SNCAIP-207ENST00000504884 FOXD4L1Q9NU39 408 aa18.75■□□□□ 0.59
SNCAIP-207ENST00000504884 TNS2Q63HR2 1409 aa18.75■□□□□ 0.59
SNCAIP-207ENST00000504884 EAF2Q96CJ1 260 aaPredicted RBP18.75■□□□□ 0.59
SNCAIP-207ENST00000504884 TEX13AQ9BXU3 409 aaPredicted RBP18.75■□□□□ 0.59
SNCAIP-207ENST00000504884 CWC22Q9HCG8 908 aaKnown RBP18.75■□□□□ 0.59
SNCAIP-207ENST00000504884 SHANK3Q9BYB0 1731 aa18.74■□□□□ 0.59
SNCAIP-207ENST00000504884 H7C1W4 665 aa18.74■□□□□ 0.59
SNCAIP-207ENST00000504884 NEK4P51957 841 aa18.74■□□□□ 0.59
SNCAIP-207ENST00000504884 CASP7P55210 303 aa18.74■□□□□ 0.59
SNCAIP-207ENST00000504884 RUFY2Q8WXA3 655 aa18.74■□□□□ 0.59
SNCAIP-207ENST00000504884 TNPO1Q92973 898 aaKnown RBP18.74■□□□□ 0.59
SNCAIP-207ENST00000504884 EVI5LQ96CN4 794 aa18.74■□□□□ 0.59
SNCAIP-207ENST00000504884 ARFGEF2Q9Y6D5 1785 aa18.74■□□□□ 0.59
SNCAIP-207ENST00000504884 DDX11L8A8MPP1 907 aa18.73■□□□□ 0.59
SNCAIP-207ENST00000504884 GBP4Q96PP9 640 aa18.73■□□□□ 0.59
SNCAIP-207ENST00000504884 SIL1Q9H173 461 aa18.73■□□□□ 0.59
SNCAIP-207ENST00000504884 PAPPAQ13219 1627 aa18.73■□□□□ 0.59
SNCAIP-207ENST00000504884 AK9Q5TCS8 1911 aa18.73■□□□□ 0.59
SNCAIP-207ENST00000504884 HSPA4P34932 840 aa18.73■□□□□ 0.59
SNCAIP-207ENST00000504884 RFX5P48382 616 aaPredicted RBP18.73■□□□□ 0.59
SNCAIP-207ENST00000504884 TTLL7Q6ZT98 887 aa18.73■□□□□ 0.59
SNCAIP-207ENST00000504884 KIAA1211Q6ZU35 1233 aa18.73■□□□□ 0.59
SNCAIP-207ENST00000504884 VSIG10Q8N0Z9 540 aa18.73■□□□□ 0.59
SNCAIP-207ENST00000504884 JARID2Q92833 1246 aaPredicted RBP18.73■□□□□ 0.59
SNCAIP-207ENST00000504884 CWC25Q9NXE8 425 aaPredicted RBP18.73■□□□□ 0.59
SNCAIP-207ENST00000504884 PTPN12Q05209 780 aaKnown RBP18.72■□□□□ 0.59
SNCAIP-207ENST00000504884 KLHDC4Q8TBB5 520 aa18.72■□□□□ 0.59
SNCAIP-207ENST00000504884 CCDC8Q9H0W5 538 aaPredicted RBP18.72■□□□□ 0.59
SNCAIP-207ENST00000504884 DIAPH3Q9NSV4 1193 aa18.72■□□□□ 0.59
SNCAIP-207ENST00000504884 CCDC191Q8NCU4 936 aa18.71■□□□□ 0.59
SNCAIP-207ENST00000504884 IL25Q9H293 177 aa18.71■□□□□ 0.59
SNCAIP-207ENST00000504884 PALD1Q9ULE6 856 aa18.71■□□□□ 0.59
SNCAIP-207ENST00000504884 AFDNP55196 1824 aaKnown RBP18.71■□□□□ 0.59
SNCAIP-207ENST00000504884 HIP1O00291 1037 aa18.71■□□□□ 0.59
SNCAIP-207ENST00000504884 NUCB2P80303 420 aa18.71■□□□□ 0.59
SNCAIP-207ENST00000504884 CWC27Q6UX04 472 aaKnown RBP18.71■□□□□ 0.59
SNCAIP-207ENST00000504884 PIGBQ92521 554 aa18.71■□□□□ 0.59
SNCAIP-207ENST00000504884 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.71■□□□□ 0.59
SNCAIP-207ENST00000504884 COL14A1Q05707 1796 aaKnown RBP18.7■□□□□ 0.58
SNCAIP-207ENST00000504884 RAD50Q92878 1312 aa18.7■□□□□ 0.58
SNCAIP-207ENST00000504884 LSG1Q9H089 658 aaKnown RBP18.7■□□□□ 0.58
SNCAIP-207ENST00000504884 PTMSP20962 102 aa18.69■□□□□ 0.58
SNCAIP-207ENST00000504884 EXOC5O00471 708 aa18.69■□□□□ 0.58
SNCAIP-207ENST00000504884 FOXO4P98177 505 aa18.69■□□□□ 0.58
SNCAIP-207ENST00000504884 LMBR1LQ6UX01 489 aa18.69■□□□□ 0.58
SNCAIP-207ENST00000504884 ASAP1Q9ULH1 1129 aa18.69■□□□□ 0.58
SNCAIP-207ENST00000504884 TRAK2O60296 914 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms