RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 DTNBO60941 627 aa11.73□□□□□ -0.53
CSF1R-203ENST00000504875 ALDH1L1O75891 902 aa11.73□□□□□ -0.53
CSF1R-203ENST00000504875 LINS1Q8NG48 757 aa11.73□□□□□ -0.53
CSF1R-203ENST00000504875 DDX21Q9NR30 783 aaKnown RBP eCLIP11.73□□□□□ -0.53
CSF1R-203ENST00000504875 SUCLG2Q96I99 432 aa11.73□□□□□ -0.53
CSF1R-203ENST00000504875 ZHX1Q9UKY1 873 aaPredicted RBP11.73□□□□□ -0.53
CSF1R-203ENST00000504875 NAP1L2Q9ULW6 460 aaPredicted RBP11.73□□□□□ -0.53
CSF1R-203ENST00000504875 ERBB3P21860 1342 aa11.73□□□□□ -0.53
CSF1R-203ENST00000504875 ZKSCAN1P17029 563 aaPredicted RBP11.73□□□□□ -0.53
CSF1R-203ENST00000504875 PRPF40BQ6NWY9 871 aaKnown RBP11.73□□□□□ -0.53
CSF1R-203ENST00000504875 UBE3BQ7Z3V4 1068 aa11.73□□□□□ -0.53
CSF1R-203ENST00000504875 CADPS2Q86UW7 1296 aa11.73□□□□□ -0.53
CSF1R-203ENST00000504875 ZNF496Q96IT1 587 aaPredicted RBP11.73□□□□□ -0.53
CSF1R-203ENST00000504875 CASTP20810 708 aaKnown RBP11.72□□□□□ -0.53
CSF1R-203ENST00000504875 NEUROD6Q96NK8 337 aa11.72□□□□□ -0.53
CSF1R-203ENST00000504875 DNAJC2Q99543 621 aaKnown RBP11.72□□□□□ -0.53
CSF1R-203ENST00000504875 PDCL3Q9H2J4 239 aa11.72□□□□□ -0.53
CSF1R-203ENST00000504875 NPHP3Q7Z494 1330 aa11.72□□□□□ -0.53
CSF1R-203ENST00000504875 CPA1P15085 419 aa11.72□□□□□ -0.53
CSF1R-203ENST00000504875 JAKMIP1Q96N16 626 aaKnown RBP11.72□□□□□ -0.53
CSF1R-203ENST00000504875 PRDM10Q9NQV6 1147 aa11.72□□□□□ -0.53
CSF1R-203ENST00000504875 TMEM94Q12767 1356 aa11.72□□□□□ -0.53
CSF1R-203ENST00000504875 ANKRD13DQ6ZTN6 518 aa11.72□□□□□ -0.53
CSF1R-203ENST00000504875 SLC52A2Q9HAB3 445 aa11.72□□□□□ -0.53
CSF1R-203ENST00000504875 SMC3Q9UQE7 1217 aa11.72□□□□□ -0.53
CSF1R-203ENST00000504875 FMN2Q9NZ56 1722 aa11.71□□□□□ -0.53
CSF1R-203ENST00000504875 FMNL2Q96PY5 1086 aa11.71□□□□□ -0.53
CSF1R-203ENST00000504875 GDPD2Q9HCC8 539 aa11.71□□□□□ -0.53
CSF1R-203ENST00000504875 USP16Q9Y5T5 823 aa11.71□□□□□ -0.53
CSF1R-203ENST00000504875 CEMIPQ8WUJ3 1361 aa11.71□□□□□ -0.53
CSF1R-203ENST00000504875 SNRPA1P09661 255 aaKnown RBP11.71□□□□□ -0.53
CSF1R-203ENST00000504875 RBM27Q9P2N5 1060 aaKnown RBP11.71□□□□□ -0.53
CSF1R-203ENST00000504875 STAP2Q9UGK3 403 aa11.71□□□□□ -0.53
CSF1R-203ENST00000504875 A0A087WZG4 1122 aa11.71□□□□□ -0.54
CSF1R-203ENST00000504875 TAOK2Q9UL54 1235 aa11.71□□□□□ -0.54
CSF1R-203ENST00000504875 NASPP49321 788 aaPredicted RBP11.7□□□□□ -0.54
CSF1R-203ENST00000504875 AK9Q5TCS8 1911 aa11.7□□□□□ -0.54
CSF1R-203ENST00000504875 PLCB2Q00722 1185 aa11.7□□□□□ -0.54
CSF1R-203ENST00000504875 ADCY9O60503 1353 aa11.7□□□□□ -0.54
CSF1R-203ENST00000504875 VPS37CA5D8V6 355 aaPredicted RBP11.7□□□□□ -0.54
CSF1R-203ENST00000504875 PHKG2P15735 406 aa11.7□□□□□ -0.54
CSF1R-203ENST00000504875 POLA2Q14181 598 aa11.69□□□□□ -0.54
CSF1R-203ENST00000504875 RNF214Q8ND24 703 aa11.69□□□□□ -0.54
CSF1R-203ENST00000504875 CCDC85AQ96PX6 553 aaPredicted RBP11.69□□□□□ -0.54
CSF1R-203ENST00000504875 NALCNQ8IZF0 1738 aa11.69□□□□□ -0.54
CSF1R-203ENST00000504875 GORABQ5T7V8 394 aa11.69□□□□□ -0.54
CSF1R-203ENST00000504875 SYTL4Q96C24 671 aaPredicted RBP11.69□□□□□ -0.54
CSF1R-203ENST00000504875 ZBTB3Q9H5J0 574 aa11.69□□□□□ -0.54
CSF1R-203ENST00000504875 SGSM2O43147 1006 aa11.68□□□□□ -0.54
CSF1R-203ENST00000504875 ANAPC15P60006 121 aa11.68□□□□□ -0.54
CSF1R-203ENST00000504875 KLHL40Q2TBA0 621 aa11.68□□□□□ -0.54
CSF1R-203ENST00000504875 TAF7LQ5H9L4 462 aa11.68□□□□□ -0.54
CSF1R-203ENST00000504875 TPM2P07951 284 aa11.68□□□□□ -0.54
CSF1R-203ENST00000504875 CCDC83Q8IWF9 413 aa11.68□□□□□ -0.54
CSF1R-203ENST00000504875 TCEANC2Q96MN5 208 aa11.68□□□□□ -0.54
CSF1R-203ENST00000504875 IL25Q9H293 177 aa11.68□□□□□ -0.54
CSF1R-203ENST00000504875 CYP46A1Q9Y6A2 500 aa11.68□□□□□ -0.54
CSF1R-203ENST00000504875 PTMAP06454 111 aaKnown RBP11.68□□□□□ -0.54
CSF1R-203ENST00000504875 HSP90B1P14625 803 aaKnown RBP11.68□□□□□ -0.54
CSF1R-203ENST00000504875 DDIT3P35638 169 aa11.68□□□□□ -0.54
CSF1R-203ENST00000504875 PI4K2BQ8TCG2 481 aa11.68□□□□□ -0.54
CSF1R-203ENST00000504875 PXDNQ92626 1479 aa11.68□□□□□ -0.54
CSF1R-203ENST00000504875 EVI5LQ96CN4 794 aa11.68□□□□□ -0.54
CSF1R-203ENST00000504875 PDRG1Q9NUG6 133 aa11.68□□□□□ -0.54
CSF1R-203ENST00000504875 XRN1Q8IZH2 1706 aaKnown RBP11.68□□□□□ -0.54
CSF1R-203ENST00000504875 GAS2L3Q86XJ1 694 aa11.67□□□□□ -0.54
CSF1R-203ENST00000504875 DCAF5Q96JK2 942 aa11.67□□□□□ -0.54
CSF1R-203ENST00000504875 NDUFB9Q9Y6M9 179 aa11.67□□□□□ -0.54
CSF1R-203ENST00000504875 RGPD1P0DJD0 1748 aa11.67□□□□□ -0.54
CSF1R-203ENST00000504875 AOX1Q06278 1338 aa11.67□□□□□ -0.54
CSF1R-203ENST00000504875 TTC41PQ6P2S7 1318 aa11.67□□□□□ -0.54
CSF1R-203ENST00000504875 NCOA3Q9Y6Q9 1424 aa11.67□□□□□ -0.54
CSF1R-203ENST00000504875 FIBPO43427 364 aa11.67□□□□□ -0.54
CSF1R-203ENST00000504875 STK3Q13188 491 aa11.67□□□□□ -0.54
CSF1R-203ENST00000504875 EAF2Q96CJ1 260 aaPredicted RBP11.67□□□□□ -0.54
CSF1R-203ENST00000504875 C1orf167Q5SNV9 1468 aa11.67□□□□□ -0.54
CSF1R-203ENST00000504875 SYCE3A1L190 88 aa11.66□□□□□ -0.54
CSF1R-203ENST00000504875 AK2P54819 239 aa11.66□□□□□ -0.54
CSF1R-203ENST00000504875 RNF20Q5VTR2 975 aa11.66□□□□□ -0.54
CSF1R-203ENST00000504875 FAM227BQ96M60 508 aa11.66□□□□□ -0.54
CSF1R-203ENST00000504875 BCL11BQ9C0K0 894 aaPredicted RBP11.66□□□□□ -0.54
CSF1R-203ENST00000504875 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.66□□□□□ -0.54
CSF1R-203ENST00000504875 SNX14Q9Y5W7 946 aa11.66□□□□□ -0.54
CSF1R-203ENST00000504875 NEURL1BA8MQ27 555 aa11.66□□□□□ -0.54
CSF1R-203ENST00000504875 MSNP26038 577 aaKnown RBP11.66□□□□□ -0.54
CSF1R-203ENST00000504875 HSPA4P34932 840 aa11.66□□□□□ -0.54
CSF1R-203ENST00000504875 GCKRQ14397 625 aa11.66□□□□□ -0.54
CSF1R-203ENST00000504875 SYAP1Q96A49 352 aaPredicted RBP11.66□□□□□ -0.54
CSF1R-203ENST00000504875 EDC3Q96F86 508 aaKnown RBP11.66□□□□□ -0.54
CSF1R-203ENST00000504875 TLR7Q9NYK1 1049 aaKnown RBP11.66□□□□□ -0.54
CSF1R-203ENST00000504875 RAD50Q92878 1312 aa11.66□□□□□ -0.54
CSF1R-203ENST00000504875 WDR33Q9C0J8 1336 aaKnown RBP11.66□□□□□ -0.54
CSF1R-203ENST00000504875 NMIQ13287 307 aaPredicted RBP11.66□□□□□ -0.54
CSF1R-203ENST00000504875 RASEFQ8IZ41 740 aa11.66□□□□□ -0.54
CSF1R-203ENST00000504875 ZCRB1Q8TBF4 217 aaKnown RBP11.66□□□□□ -0.54
CSF1R-203ENST00000504875 METTL22Q9BUU2 404 aaPredicted RBP11.66□□□□□ -0.54
CSF1R-203ENST00000504875 LMBR1LQ6UX01 489 aa11.65□□□□□ -0.54
CSF1R-203ENST00000504875 LIMCH1Q9UPQ0 1083 aa11.65□□□□□ -0.54
CSF1R-203ENST00000504875 R3HCC1Q9Y3T6 440 aaKnown RBP11.65□□□□□ -0.54
CSF1R-203ENST00000504875 LTN1O94822 1766 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms