RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 USP44Q9H0E7 712 aa14.94□□□□□ -0.02
POLR2J3-210ENST00000504677 KIF6Q6ZMV9 814 aa14.93□□□□□ -0.02
POLR2J3-210ENST00000504677 SLC4A9Q96Q91 983 aa14.93□□□□□ -0.02
POLR2J3-210ENST00000504677 BRWD3Q6RI45 1802 aa14.93□□□□□ -0.02
POLR2J3-210ENST00000504677 UTYO14607 1347 aa14.92□□□□□ -0.02
POLR2J3-210ENST00000504677 LY75O60449 1722 aa14.92□□□□□ -0.02
POLR2J3-210ENST00000504677 GRM8O00222 908 aa14.92□□□□□ -0.02
POLR2J3-210ENST00000504677 KCNQ2O43526 872 aa14.92□□□□□ -0.02
POLR2J3-210ENST00000504677 ATP6V1AP38606 617 aa14.92□□□□□ -0.02
POLR2J3-210ENST00000504677 IL6STP40189 918 aaPredicted RBP14.92□□□□□ -0.02
POLR2J3-210ENST00000504677 PIP4K2AP48426 406 aaPredicted RBP14.92□□□□□ -0.02
POLR2J3-210ENST00000504677 NPM2Q86SE8 214 aaKnown RBP14.92□□□□□ -0.02
POLR2J3-210ENST00000504677 C9orf78Q9NZ63 289 aaPredicted RBP14.92□□□□□ -0.02
POLR2J3-210ENST00000504677 ANKRD36CQ5JPF3 1778 aa14.91□□□□□ -0.02
POLR2J3-210ENST00000504677 NEURL1BA8MQ27 555 aa14.91□□□□□ -0.02
POLR2J3-210ENST00000504677 FAM196AQ6ZSG2 479 aa14.91□□□□□ -0.02
POLR2J3-210ENST00000504677 KRT27Q7Z3Y8 459 aa14.91□□□□□ -0.02
POLR2J3-210ENST00000504677 SIRT2Q8IXJ6 389 aa14.91□□□□□ -0.02
POLR2J3-210ENST00000504677 MYD88Q99836 296 aa14.91□□□□□ -0.02
POLR2J3-210ENST00000504677 CCDC87Q9NVE4 849 aa14.91□□□□□ -0.02
POLR2J3-210ENST00000504677 PDZRN3Q9UPQ7 1066 aa14.91□□□□□ -0.02
POLR2J3-210ENST00000504677 LRRFIP2Q9Y608 721 aaKnown RBP14.91□□□□□ -0.02
POLR2J3-210ENST00000504677 COL15A1P39059 1388 aa14.9□□□□□ -0.02
POLR2J3-210ENST00000504677 IGKV5-2P06315 115 aa14.9□□□□□ -0.02
POLR2J3-210ENST00000504677 TTLL7Q6ZT98 887 aa14.9□□□□□ -0.02
POLR2J3-210ENST00000504677 DCTPP1Q9H773 170 aa14.9□□□□□ -0.02
POLR2J3-210ENST00000504677 ZBTB1Q9Y2K1 713 aa14.9□□□□□ -0.02
POLR2J3-210ENST00000504677 HMGB2P26583 209 aaKnown RBP14.89□□□□□ -0.03
POLR2J3-210ENST00000504677 ATP8B2P98198 1209 aa14.89□□□□□ -0.03
POLR2J3-210ENST00000504677 NUCB1Q02818 461 aa14.89□□□□□ -0.03
POLR2J3-210ENST00000504677 GCKRQ14397 625 aa14.89□□□□□ -0.03
POLR2J3-210ENST00000504677 CWF19L2Q2TBE0 894 aaKnown RBP14.89□□□□□ -0.03
POLR2J3-210ENST00000504677 HSP90AB3PQ58FF7 597 aa14.89□□□□□ -0.03
POLR2J3-210ENST00000504677 BCL11BQ9C0K0 894 aaPredicted RBP14.89□□□□□ -0.03
POLR2J3-210ENST00000504677 MAP3K15Q6ZN16 1313 aa14.89□□□□□ -0.03
POLR2J3-210ENST00000504677 NBPF7P0C2Y1 421 aaPredicted RBP14.88□□□□□ -0.03
POLR2J3-210ENST00000504677 CRKLP46109 303 aaKnown RBP14.88□□□□□ -0.03
POLR2J3-210ENST00000504677 MTX1Q13505 466 aa14.88□□□□□ -0.03
POLR2J3-210ENST00000504677 ZBTB47Q9UFB7 747 aaPredicted RBP14.88□□□□□ -0.03
POLR2J3-210ENST00000504677 CNTNAP4Q9C0A0 1308 aa14.88□□□□□ -0.03
POLR2J3-210ENST00000504677 ERVV-1B6SEH8 477 aa14.87□□□□□ -0.03
POLR2J3-210ENST00000504677 TRIM28Q13263 835 aaKnown RBP14.87□□□□□ -0.03
POLR2J3-210ENST00000504677 ITPK1Q13572 414 aa14.87□□□□□ -0.03
POLR2J3-210ENST00000504677 CHD1LQ86WJ1 897 aa14.87□□□□□ -0.03
POLR2J3-210ENST00000504677 CCDC191Q8NCU4 936 aa14.87□□□□□ -0.03
POLR2J3-210ENST00000504677 ZBTB3Q9H5J0 574 aa14.87□□□□□ -0.03
POLR2J3-210ENST00000504677 CWC25Q9NXE8 425 aaPredicted RBP14.87□□□□□ -0.03
POLR2J3-210ENST00000504677 ZNF330Q9Y3S2 320 aaPredicted RBP14.87□□□□□ -0.03
POLR2J3-210ENST00000504677 A0A087WZG4 1122 aa14.86□□□□□ -0.03
POLR2J3-210ENST00000504677 RXRBP28702 533 aa14.86□□□□□ -0.03
POLR2J3-210ENST00000504677 EIF5P55010 431 aaKnown RBP14.86□□□□□ -0.03
POLR2J3-210ENST00000504677 INTS5Q6P9B9 1019 aaKnown RBP14.86□□□□□ -0.03
POLR2J3-210ENST00000504677 SSH3Q8TE77 659 aa14.86□□□□□ -0.03
POLR2J3-210ENST00000504677 TAF1LQ8IZX4 1826 aa14.86□□□□□ -0.03
POLR2J3-210ENST00000504677 BCORQ6W2J9 1755 aa14.85□□□□□ -0.03
POLR2J3-210ENST00000504677 MYH14Q7Z406 1995 aaKnown RBP14.85□□□□□ -0.03
POLR2J3-210ENST00000504677 RGL2O15211 777 aa14.85□□□□□ -0.03
POLR2J3-210ENST00000504677 RGS3P49796 1198 aa14.85□□□□□ -0.03
POLR2J3-210ENST00000504677 TCIRG1Q13488 830 aa14.85□□□□□ -0.03
POLR2J3-210ENST00000504677 POLA2Q14181 598 aa14.85□□□□□ -0.03
POLR2J3-210ENST00000504677 RC3H1Q5TC82 1133 aaKnown RBP14.85□□□□□ -0.03
POLR2J3-210ENST00000504677 GIGYF2Q6Y7W6 1299 aaKnown RBP14.85□□□□□ -0.03
POLR2J3-210ENST00000504677 ISCA1Q9BUE6 129 aa14.85□□□□□ -0.03
POLR2J3-210ENST00000504677 NUP98P52948 1817 aa14.85□□□□□ -0.03
POLR2J3-210ENST00000504677 HSP90AB4PQ58FF6 505 aa14.84□□□□□ -0.03
POLR2J3-210ENST00000504677 ANKRD45Q5TZF3 282 aa14.84□□□□□ -0.03
POLR2J3-210ENST00000504677 PPP1R42Q7Z4L9 355 aa14.84□□□□□ -0.03
POLR2J3-210ENST00000504677 DZIP3Q86Y13 1208 aaKnown RBP14.84□□□□□ -0.03
POLR2J3-210ENST00000504677 CCNL1Q9UK58 526 aaPredicted RBP14.84□□□□□ -0.03
POLR2J3-210ENST00000504677 SCN7AQ01118 1682 aa14.84□□□□□ -0.03
POLR2J3-210ENST00000504677 PNMA6EA0A0J9YXQ4 647 aa14.83□□□□□ -0.04
POLR2J3-210ENST00000504677 ATP5J2-PTCD1G3V325 749 aa14.83□□□□□ -0.04
POLR2J3-210ENST00000504677 SRGAP3O43295 1099 aa14.83□□□□□ -0.04
POLR2J3-210ENST00000504677 FAM182BQ5T319 152 aa14.83□□□□□ -0.04
POLR2J3-210ENST00000504677 LINC00116Q8NCU8 138 aa14.83□□□□□ -0.04
POLR2J3-210ENST00000504677 SUCLG2Q96I99 432 aa14.83□□□□□ -0.04
POLR2J3-210ENST00000504677 H7C1W4 665 aa14.82□□□□□ -0.04
POLR2J3-210ENST00000504677 RAB11FIP3O75154 756 aa14.82□□□□□ -0.04
POLR2J3-210ENST00000504677 ZNF652Q9Y2D9 606 aa14.82□□□□□ -0.04
POLR2J3-210ENST00000504677 C4BP0C0L5 1744 aa14.82□□□□□ -0.04
POLR2J3-210ENST00000504677 CASP7P55210 303 aa14.81□□□□□ -0.04
POLR2J3-210ENST00000504677 SLC27A3Q5K4L6 730 aa14.81□□□□□ -0.04
POLR2J3-210ENST00000504677 PTF1AQ7RTS3 328 aa14.81□□□□□ -0.04
POLR2J3-210ENST00000504677 UBE3BQ7Z3V4 1068 aa14.81□□□□□ -0.04
POLR2J3-210ENST00000504677 SKAP1Q86WV1 359 aa14.81□□□□□ -0.04
POLR2J3-210ENST00000504677 ARXQ96QS3 562 aa14.81□□□□□ -0.04
POLR2J3-210ENST00000504677 LNPKQ9C0E8 428 aa14.81□□□□□ -0.04
POLR2J3-210ENST00000504677 BICC1Q9H694 974 aaKnown RBP14.81□□□□□ -0.04
POLR2J3-210ENST00000504677 RGPD3A6NKT7 1758 aaPredicted RBP14.8□□□□□ -0.04
POLR2J3-210ENST00000504677 RGPD4Q7Z3J3 1758 aa14.8□□□□□ -0.04
POLR2J3-210ENST00000504677 PCCAP05165 728 aaPredicted RBP14.8□□□□□ -0.04
POLR2J3-210ENST00000504677 RABL6Q3YEC7 729 aaPredicted RBP14.8□□□□□ -0.04
POLR2J3-210ENST00000504677 LRRCC1Q9C099 1032 aa14.8□□□□□ -0.04
POLR2J3-210ENST00000504677 TSHZ2Q9NRE2 1034 aa14.8□□□□□ -0.04
POLR2J3-210ENST00000504677 RPS6KA4O75676 772 aa14.79□□□□□ -0.04
POLR2J3-210ENST00000504677 CAMTA2O94983 1202 aa14.79□□□□□ -0.04
POLR2J3-210ENST00000504677 PDE4AP27815 886 aa14.79□□□□□ -0.04
POLR2J3-210ENST00000504677 FAM161AQ3B820 660 aa14.79□□□□□ -0.04
POLR2J3-210ENST00000504677 PARP10Q53GL7 1025 aa14.79□□□□□ -0.04
POLR2J3-210ENST00000504677 ERC1Q8IUD2 1116 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms