RNA–Protein interactions for RNA: ENST00000504484.5

APBB2-209, Transcript of amyloid beta precursor protein binding family B member 2, human

TSL 3

Gene APBB2, Length 2,091 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB2-209	ENST00000504484	MST1R	Q04912	1400 aa		10.87	□□□□□ -0.67
APBB2-209	ENST00000504484	GLI3	P10071	1580 aa		10.87	□□□□□ -0.67
APBB2-209	ENST00000504484	RPAP1	Q9BWH6	1393 aa	Predicted RBP	10.87	□□□□□ -0.67
APBB2-209	ENST00000504484	NASP	P49321	788 aa	Predicted RBP	10.86	□□□□□ -0.67
APBB2-209	ENST00000504484	PKD1L3	Q7Z443	1732 aa		10.86	□□□□□ -0.67
APBB2-209	ENST00000504484	INTS4	Q96HW7	963 aa	Known RBP	10.86	□□□□□ -0.67
APBB2-209	ENST00000504484	SUCLG2	Q96I99	432 aa		10.86	□□□□□ -0.67
APBB2-209	ENST00000504484	TTC14	Q96N46	770 aa		10.86	□□□□□ -0.67
APBB2-209	ENST00000504484	PPP1R9B	Q96SB3	815 aa		10.86	□□□□□ -0.67
APBB2-209	ENST00000504484	EPB41L2	O43491	1005 aa	Known RBP	10.86	□□□□□ -0.67
APBB2-209	ENST00000504484	ALDH1L1	O75891	902 aa		10.86	□□□□□ -0.67
APBB2-209	ENST00000504484	PRIM1	P49642	420 aa	Known RBP	10.86	□□□□□ -0.67
APBB2-209	ENST00000504484	CNTROB	Q8N137	903 aa		10.86	□□□□□ -0.67
APBB2-209	ENST00000504484	LARP6	Q9BRS8	491 aa	Known RBP	10.86	□□□□□ -0.67
APBB2-209	ENST00000504484	SPG7	Q9UQ90	795 aa		10.86	□□□□□ -0.67
APBB2-209	ENST00000504484	LAMB4	A4D0S4	1761 aa		10.85	□□□□□ -0.67
APBB2-209	ENST00000504484	ESPN	B1AK53	854 aa		10.85	□□□□□ -0.67
APBB2-209	ENST00000504484	CPA1	P15085	419 aa		10.85	□□□□□ -0.67
APBB2-209	ENST00000504484	PTH1R	Q03431	593 aa		10.85	□□□□□ -0.67
APBB2-209	ENST00000504484	SLC39A6	Q13433	755 aa		10.85	□□□□□ -0.67
APBB2-209	ENST00000504484	CWC27	Q6UX04	472 aa	Known RBP	10.85	□□□□□ -0.67
APBB2-209	ENST00000504484	MEGF6	O75095	1541 aa		10.85	□□□□□ -0.67
APBB2-209	ENST00000504484	TTC41P	Q6P2S7	1318 aa		10.85	□□□□□ -0.67
APBB2-209	ENST00000504484	DCC	P43146	1447 aa		10.85	□□□□□ -0.67
APBB2-209	ENST00000504484	SASH1	O94885	1247 aa		10.85	□□□□□ -0.67
APBB2-209	ENST00000504484	OS9	Q13438	667 aa	Predicted RBP	10.85	□□□□□ -0.67
APBB2-209	ENST00000504484	DNAJC5	Q9H3Z4	198 aa		10.85	□□□□□ -0.67
APBB2-209	ENST00000504484	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.85	□□□□□ -0.67
APBB2-209	ENST00000504484	ERBB3	P21860	1342 aa		10.84	□□□□□ -0.67
APBB2-209	ENST00000504484	LAMA4	Q16363	1823 aa		10.84	□□□□□ -0.67
APBB2-209	ENST00000504484	DTNB	O60941	627 aa		10.84	□□□□□ -0.67
APBB2-209	ENST00000504484	LARGE1	O95461	756 aa		10.84	□□□□□ -0.67
APBB2-209	ENST00000504484	IGKV5-2	P06315	115 aa		10.84	□□□□□ -0.67
APBB2-209	ENST00000504484	AK2	P54819	239 aa		10.84	□□□□□ -0.67
APBB2-209	ENST00000504484	ZC3H6	P61129	1189 aa	Known RBP	10.84	□□□□□ -0.67
APBB2-209	ENST00000504484	CCDC173	Q0VFZ6	552 aa		10.84	□□□□□ -0.67
APBB2-209	ENST00000504484	AIMP1	Q12904	312 aa	Known RBP	10.84	□□□□□ -0.67
APBB2-209	ENST00000504484	DDX17	Q92841	729 aa	Known RBP	10.84	□□□□□ -0.67
APBB2-209	ENST00000504484	UTY	O14607	1347 aa		10.84	□□□□□ -0.67
APBB2-209	ENST00000504484	GLRX3	O76003	335 aa	Known RBP	10.83	□□□□□ -0.68
APBB2-209	ENST00000504484	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.83	□□□□□ -0.68
APBB2-209	ENST00000504484	HSP90AB4P	Q58FF6	505 aa		10.83	□□□□□ -0.68
APBB2-209	ENST00000504484	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.83	□□□□□ -0.68
APBB2-209	ENST00000504484	RUFY3	Q7L099	469 aa		10.83	□□□□□ -0.68
APBB2-209	ENST00000504484	BICC1	Q9H694	974 aa	Known RBP	10.83	□□□□□ -0.68
APBB2-209	ENST00000504484	GDPD2	Q9HCC8	539 aa		10.83	□□□□□ -0.68
APBB2-209	ENST00000504484	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
APBB2-209	ENST00000504484	MRC1	P22897	1456 aa		10.83	□□□□□ -0.68
APBB2-209	ENST00000504484	GRM8	O00222	908 aa		10.83	□□□□□ -0.68
APBB2-209	ENST00000504484	GADD45B	O75293	160 aa	Predicted RBP	10.83	□□□□□ -0.68
APBB2-209	ENST00000504484	COL9A3	Q14050	684 aa	Predicted RBP	10.83	□□□□□ -0.68
APBB2-209	ENST00000504484	ADCK5	Q3MIX3	580 aa		10.83	□□□□□ -0.68
APBB2-209	ENST00000504484	CADPS2	Q86UW7	1296 aa		10.83	□□□□□ -0.68
APBB2-209	ENST00000504484	HYPK	Q9NX55	129 aa		10.83	□□□□□ -0.68
APBB2-209	ENST00000504484	TLR7	Q9NYK1	1049 aa	Known RBP	10.83	□□□□□ -0.68
APBB2-209	ENST00000504484	TMEM94	Q12767	1356 aa		10.83	□□□□□ -0.68
APBB2-209	ENST00000504484	XIRP1	Q702N8	1843 aa	Known RBP	10.82	□□□□□ -0.68
APBB2-209	ENST00000504484	SYCE3	A1L190	88 aa		10.82	□□□□□ -0.68
APBB2-209	ENST00000504484	EPHA10	Q5JZY3	1008 aa		10.82	□□□□□ -0.68
APBB2-209	ENST00000504484	CLASRP	Q8N2M8	674 aa	Known RBP	10.82	□□□□□ -0.68
APBB2-209	ENST00000504484	LINS1	Q8NG48	757 aa		10.82	□□□□□ -0.68
APBB2-209	ENST00000504484	EAF2	Q96CJ1	260 aa	Predicted RBP	10.82	□□□□□ -0.68
APBB2-209	ENST00000504484	ECHDC1	Q9NTX5	307 aa		10.82	□□□□□ -0.68
APBB2-209	ENST00000504484	NUP188	Q5SRE5	1749 aa		10.82	□□□□□ -0.68
APBB2-209	ENST00000504484	ZNF790	Q6PG37	636 aa		10.81	□□□□□ -0.68
APBB2-209	ENST00000504484	LRSAM1	Q6UWE0	723 aa		10.81	□□□□□ -0.68
APBB2-209	ENST00000504484	AACS	Q86V21	672 aa		10.81	□□□□□ -0.68
APBB2-209	ENST00000504484	KLHDC4	Q8TBB5	520 aa		10.81	□□□□□ -0.68
APBB2-209	ENST00000504484	NPHP3	Q7Z494	1330 aa		10.81	□□□□□ -0.68
APBB2-209	ENST00000504484	TJP1	Q07157	1748 aa		10.81	□□□□□ -0.68
APBB2-209	ENST00000504484	PARP4	Q9UKK3	1724 aa	Known RBP	10.81	□□□□□ -0.68
APBB2-209	ENST00000504484	MYL6B	P14649	208 aa		10.81	□□□□□ -0.68
APBB2-209	ENST00000504484	PIP4K2A	P48426	406 aa	Predicted RBP	10.81	□□□□□ -0.68
APBB2-209	ENST00000504484	ST3GAL1	Q11201	340 aa		10.81	□□□□□ -0.68
APBB2-209	ENST00000504484	LRP10	Q7Z4F1	713 aa		10.81	□□□□□ -0.68
APBB2-209	ENST00000504484	TRIM44	Q96DX7	344 aa	Predicted RBP	10.81	□□□□□ -0.68
APBB2-209	ENST00000504484	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.81	□□□□□ -0.68
APBB2-209	ENST00000504484	DIAPH3	Q9NSV4	1193 aa		10.81	□□□□□ -0.68
APBB2-209	ENST00000504484	ABCC6	O95255	1503 aa		10.8	□□□□□ -0.68
APBB2-209	ENST00000504484	IFIT2	P09913	472 aa	Known RBP	10.8	□□□□□ -0.68
APBB2-209	ENST00000504484	PHKG2	P15735	406 aa		10.8	□□□□□ -0.68
APBB2-209	ENST00000504484	CAST	P20810	708 aa	Known RBP	10.8	□□□□□ -0.68
APBB2-209	ENST00000504484	PRPF40B	Q6NWY9	871 aa	Known RBP	10.8	□□□□□ -0.68
APBB2-209	ENST00000504484	DDX54	Q8TDD1	881 aa	Known RBP	10.8	□□□□□ -0.68
APBB2-209	ENST00000504484	RAPGEF4	Q8WZA2	1011 aa		10.8	□□□□□ -0.68
APBB2-209	ENST00000504484	KCNB2	Q92953	911 aa		10.8	□□□□□ -0.68
APBB2-209	ENST00000504484	FAM227B	Q96M60	508 aa		10.8	□□□□□ -0.68
APBB2-209	ENST00000504484	SLC52A2	Q9HAB3	445 aa		10.8	□□□□□ -0.68
APBB2-209	ENST00000504484	UBR2	Q8IWV8	1755 aa		10.8	□□□□□ -0.68
APBB2-209	ENST00000504484	NEURL1B	A8MQ27	555 aa		10.8	□□□□□ -0.68
APBB2-209	ENST00000504484	USP48	Q86UV5	1035 aa		10.8	□□□□□ -0.68
APBB2-209	ENST00000504484	ERC1	Q8IUD2	1116 aa		10.8	□□□□□ -0.68
APBB2-209	ENST00000504484	NFATC2IP	Q8NCF5	419 aa		10.8	□□□□□ -0.68
APBB2-209	ENST00000504484	XAGE3	Q8WTP9	111 aa		10.8	□□□□□ -0.68
APBB2-209	ENST00000504484	JARID2	Q92833	1246 aa	Predicted RBP	10.8	□□□□□ -0.68
APBB2-209	ENST00000504484	PDLIM2	Q96JY6	352 aa		10.8	□□□□□ -0.68
APBB2-209	ENST00000504484	SIL1	Q9H173	461 aa		10.8	□□□□□ -0.68
APBB2-209	ENST00000504484	PLEKHG2	Q9H7P9	1386 aa		10.79	□□□□□ -0.68
APBB2-209	ENST00000504484	SHANK3	Q9BYB0	1731 aa		10.79	□□□□□ -0.68
APBB2-209	ENST00000504484	WDR33	Q9C0J8	1336 aa	Known RBP	10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms