RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 BMP2P12643 396 aa11.42□□□□□ -0.58
UBE2B-204ENST00000504431 GTF2E1P29083 439 aaPredicted RBP11.42□□□□□ -0.58
UBE2B-204ENST00000504431 GPC1P35052 558 aa11.42□□□□□ -0.58
UBE2B-204ENST00000504431 SYCP2Q9BX26 1530 aa11.41□□□□□ -0.58
UBE2B-204ENST00000504431 SPINT1O43278 529 aa11.41□□□□□ -0.58
UBE2B-204ENST00000504431 B4GALNT3Q6L9W6 998 aa11.41□□□□□ -0.58
UBE2B-204ENST00000504431 KDF1Q8NAX2 398 aaPredicted RBP11.41□□□□□ -0.58
UBE2B-204ENST00000504431 SLC4A9Q96Q91 983 aa11.41□□□□□ -0.58
UBE2B-204ENST00000504431 ZNF395Q9H8N7 513 aaPredicted RBP11.41□□□□□ -0.58
UBE2B-204ENST00000504431 YEATS2Q9ULM3 1422 aa11.41□□□□□ -0.58
UBE2B-204ENST00000504431 ABCC1P33527 1531 aa11.4□□□□□ -0.58
UBE2B-204ENST00000504431 ITSN2Q9NZM3 1697 aa11.4□□□□□ -0.58
UBE2B-204ENST00000504431 IL2RAP01589 272 aa11.4□□□□□ -0.58
UBE2B-204ENST00000504431 PDIA4P13667 645 aaKnown RBP11.4□□□□□ -0.58
UBE2B-204ENST00000504431 TLR1Q15399 786 aa11.4□□□□□ -0.58
UBE2B-204ENST00000504431 NBPF15Q8N660 670 aa11.4□□□□□ -0.58
UBE2B-204ENST00000504431 POGZQ7Z3K3 1410 aa11.4□□□□□ -0.58
UBE2B-204ENST00000504431 SMTNP53814 917 aa11.39□□□□□ -0.59
UBE2B-204ENST00000504431 HINFPQ9BQA5 517 aa11.39□□□□□ -0.59
UBE2B-204ENST00000504431 POLMQ9NP87 494 aaPredicted RBP11.39□□□□□ -0.59
UBE2B-204ENST00000504431 SERTAD1Q9UHV2 236 aa11.39□□□□□ -0.59
UBE2B-204ENST00000504431 TMEM88BA6NKF7 163 aa11.38□□□□□ -0.59
UBE2B-204ENST00000504431 C6orf118Q5T5N4 469 aa11.38□□□□□ -0.59
UBE2B-204ENST00000504431 CLP1Q92989 425 aaKnown RBP11.38□□□□□ -0.59
UBE2B-204ENST00000504431 AAASQ9NRG9 546 aa11.38□□□□□ -0.59
UBE2B-204ENST00000504431 ARID4BQ4LE39 1312 aaPredicted RBP11.37□□□□□ -0.59
UBE2B-204ENST00000504431 MYOM3Q5VTT5 1437 aa11.37□□□□□ -0.59
UBE2B-204ENST00000504431 A6NJY4 79 aa11.37□□□□□ -0.59
UBE2B-204ENST00000504431 MLECQ14165 292 aa11.37□□□□□ -0.59
UBE2B-204ENST00000504431 TRAIPQ9BWF2 469 aa11.37□□□□□ -0.59
UBE2B-204ENST00000504431 CAMSAP2Q08AD1 1489 aa11.37□□□□□ -0.59
UBE2B-204ENST00000504431 SIGLEC1Q9BZZ2 1709 aa11.36□□□□□ -0.59
UBE2B-204ENST00000504431 STAU1O95793 577 aaKnown RBP11.36□□□□□ -0.59
UBE2B-204ENST00000504431 BMP1P13497 986 aa11.36□□□□□ -0.59
UBE2B-204ENST00000504431 RNF144AP50876 292 aaPredicted RBP11.36□□□□□ -0.59
UBE2B-204ENST00000504431 CENPCQ03188 943 aa11.36□□□□□ -0.59
UBE2B-204ENST00000504431 MTFR1Q15390 333 aa11.36□□□□□ -0.59
UBE2B-204ENST00000504431 SLC27A3Q5K4L6 730 aa11.36□□□□□ -0.59
UBE2B-204ENST00000504431 TSEN2Q8NCE0 465 aaKnown RBP11.36□□□□□ -0.59
UBE2B-204ENST00000504431 PURBQ96QR8 312 aaKnown RBP11.36□□□□□ -0.59
UBE2B-204ENST00000504431 INSM2Q96T92 566 aaPredicted RBP11.36□□□□□ -0.59
UBE2B-204ENST00000504431 HRH3Q9Y5N1 445 aa11.36□□□□□ -0.59
UBE2B-204ENST00000504431 ZFYVE16Q7Z3T8 1539 aa11.35□□□□□ -0.59
UBE2B-204ENST00000504431 FAM50AQ14320 339 aaKnown RBP11.35□□□□□ -0.59
UBE2B-204ENST00000504431 Q6ZNB5 142 aa11.35□□□□□ -0.59
UBE2B-204ENST00000504431 TRIM46Q7Z4K8 759 aa11.35□□□□□ -0.59
UBE2B-204ENST00000504431 GAS2L2Q8NHY3 880 aa11.35□□□□□ -0.59
UBE2B-204ENST00000504431 ZSCAN10Q96SZ4 725 aaPredicted RBP11.35□□□□□ -0.59
UBE2B-204ENST00000504431 ATP13A2Q9NQ11 1180 aa11.35□□□□□ -0.59
UBE2B-204ENST00000504431 CHMP3Q9Y3E7 222 aa11.35□□□□□ -0.59
UBE2B-204ENST00000504431 ZNF518AQ6AHZ1 1483 aa11.35□□□□□ -0.59
UBE2B-204ENST00000504431 SPAG9O60271 1321 aaKnown RBP11.35□□□□□ -0.59
UBE2B-204ENST00000504431 MBD5Q9P267 1494 aa11.34□□□□□ -0.59
UBE2B-204ENST00000504431 CDK2AP1O14519 115 aa11.34□□□□□ -0.59
UBE2B-204ENST00000504431 SENP2Q9HC62 589 aa11.34□□□□□ -0.59
UBE2B-204ENST00000504431 ZMYM4Q5VZL5 1548 aa11.34□□□□□ -0.59
UBE2B-204ENST00000504431 KDM5CP41229 1560 aa11.33□□□□□ -0.6
UBE2B-204ENST00000504431 ST8SIA5O15466 376 aa11.33□□□□□ -0.6
UBE2B-204ENST00000504431 EPHA4P54764 986 aa11.33□□□□□ -0.6
UBE2B-204ENST00000504431 GNASQ5JWF2 1037 aa11.33□□□□□ -0.6
UBE2B-204ENST00000504431 TMEM214Q6NUQ4 689 aaKnown RBP11.33□□□□□ -0.6
UBE2B-204ENST00000504431 TNS4Q8IZW8 715 aa11.33□□□□□ -0.6
UBE2B-204ENST00000504431 FHDC1Q9C0D6 1143 aaPredicted RBP11.33□□□□□ -0.6
UBE2B-204ENST00000504431 SCHIP1Q9P0W5 487 aaPredicted RBP11.33□□□□□ -0.6
UBE2B-204ENST00000504431 PTPN23Q9H3S7 1636 aa11.33□□□□□ -0.6
UBE2B-204ENST00000504431 KIDINS220Q9ULH0 1771 aa11.33□□□□□ -0.6
UBE2B-204ENST00000504431 KIAA1107Q9UPP5 1409 aa11.33□□□□□ -0.6
UBE2B-204ENST00000504431 HECW2Q9P2P5 1572 aa11.33□□□□□ -0.6
UBE2B-204ENST00000504431 ABCA6Q8N139 1617 aa11.32□□□□□ -0.6
UBE2B-204ENST00000504431 ARHGEF40Q8TER5 1519 aa11.32□□□□□ -0.6
UBE2B-204ENST00000504431 TTLL8A6PVC2 850 aa11.32□□□□□ -0.6
UBE2B-204ENST00000504431 KIFC2Q96AC6 838 aa11.32□□□□□ -0.6
UBE2B-204ENST00000504431 ZFP42Q96MM3 310 aa11.32□□□□□ -0.6
UBE2B-204ENST00000504431 FGD6Q6ZV73 1430 aa11.32□□□□□ -0.6
UBE2B-204ENST00000504431 PLEKHH2Q8IVE3 1493 aa11.32□□□□□ -0.6
UBE2B-204ENST00000504431 PATL2C9JE40 543 aaKnown RBP11.31□□□□□ -0.6
UBE2B-204ENST00000504431 IGFBP4P22692 258 aa11.31□□□□□ -0.6
UBE2B-204ENST00000504431 ATP2B4P23634 1241 aa11.31□□□□□ -0.6
UBE2B-204ENST00000504431 ITGAEP38570 1179 aa11.31□□□□□ -0.6
UBE2B-204ENST00000504431 CTSOP43234 321 aaPredicted RBP11.31□□□□□ -0.6
UBE2B-204ENST00000504431 FOXD4L5Q5VV16 416 aaPredicted RBP11.31□□□□□ -0.6
UBE2B-204ENST00000504431 GRIP2Q9C0E4 1043 aa11.31□□□□□ -0.6
UBE2B-204ENST00000504431 ATP10AO60312 1499 aa11.31□□□□□ -0.6
UBE2B-204ENST00000504431 DIP2CQ9Y2E4 1556 aa11.3□□□□□ -0.6
UBE2B-204ENST00000504431 MIA2Q96PC5 1412 aa11.3□□□□□ -0.6
UBE2B-204ENST00000504431 FOXO3O43524 673 aa11.3□□□□□ -0.6
UBE2B-204ENST00000504431 FOXK2Q01167 660 aa11.3□□□□□ -0.6
UBE2B-204ENST00000504431 SLC9A9Q8IVB4 645 aa11.3□□□□□ -0.6
UBE2B-204ENST00000504431 RNF217Q8TC41 542 aa11.3□□□□□ -0.6
UBE2B-204ENST00000504431 RHBDD1Q8TEB9 315 aa11.3□□□□□ -0.6
UBE2B-204ENST00000504431 MLH3Q9UHC1 1453 aa11.3□□□□□ -0.6
UBE2B-204ENST00000504431 SOS2Q07890 1332 aaPredicted RBP11.3□□□□□ -0.6
UBE2B-204ENST00000504431 PRMT3O60678 531 aa11.29□□□□□ -0.6
UBE2B-204ENST00000504431 BRD1O95696 1058 aa11.29□□□□□ -0.6
UBE2B-204ENST00000504431 WEE1P30291 646 aa11.29□□□□□ -0.6
UBE2B-204ENST00000504431 PSMA6P60900 246 aaKnown RBP11.29□□□□□ -0.6
UBE2B-204ENST00000504431 LYSMD3Q7Z3D4 306 aa11.29□□□□□ -0.6
UBE2B-204ENST00000504431 NIFKQ9BYG3 293 aaKnown RBP11.29□□□□□ -0.6
UBE2B-204ENST00000504431 TSPAN10Q9H1Z9 355 aaPredicted RBP11.29□□□□□ -0.6
UBE2B-204ENST00000504431 MAGI2Q86UL8 1455 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms