RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 ZNF280DQ6N043 979 aa6.74□□□□□ -1.33
NIPBL-204ENST00000504430 PNISRQ8TF01 805 aaKnown RBP6.74□□□□□ -1.33
NIPBL-204ENST00000504430 SCG3Q8WXD2 468 aaKnown RBP6.74□□□□□ -1.33
NIPBL-204ENST00000504430 CRELD1Q96HD1 420 aa6.74□□□□□ -1.33
NIPBL-204ENST00000504430 OPLAHO14841 1288 aa6.74□□□□□ -1.33
NIPBL-204ENST00000504430 POLD1P28340 1107 aa6.74□□□□□ -1.33
NIPBL-204ENST00000504430 ZNF654Q8IZM8 581 aa6.74□□□□□ -1.33
NIPBL-204ENST00000504430 SCYL1Q96KG9 808 aa6.74□□□□□ -1.33
NIPBL-204ENST00000504430 CTDP1Q9Y5B0 961 aaPredicted RBP6.74□□□□□ -1.33
NIPBL-204ENST00000504430 F12P00748 615 aaPredicted RBP6.74□□□□□ -1.33
NIPBL-204ENST00000504430 PTMAP06454 111 aaKnown RBP6.74□□□□□ -1.33
NIPBL-204ENST00000504430 FAM163BP0C2L3 166 aa6.74□□□□□ -1.33
NIPBL-204ENST00000504430 GNA15P30679 374 aa6.74□□□□□ -1.33
NIPBL-204ENST00000504430 LILRB2Q8N423 598 aa6.74□□□□□ -1.33
NIPBL-204ENST00000504430 CHIC2Q9UKJ5 165 aa6.74□□□□□ -1.33
NIPBL-204ENST00000504430 INTUQ9ULD6 942 aa6.74□□□□□ -1.33
NIPBL-204ENST00000504430 TRIM6-TRIM34B2RNG4 842 aa6.73□□□□□ -1.33
NIPBL-204ENST00000504430 FAM13AO94988 1023 aa6.73□□□□□ -1.33
NIPBL-204ENST00000504430 IRS1P35568 1242 aa6.73□□□□□ -1.33
NIPBL-204ENST00000504430 NFE2L2Q16236 605 aa6.73□□□□□ -1.33
NIPBL-204ENST00000504430 ARSIQ5FYB1 569 aa6.73□□□□□ -1.33
NIPBL-204ENST00000504430 CKAP2LQ8IYA6 745 aa6.73□□□□□ -1.33
NIPBL-204ENST00000504430 TNS4Q8IZW8 715 aa6.73□□□□□ -1.33
NIPBL-204ENST00000504430 C12orf49Q9H741 205 aa6.73□□□□□ -1.33
NIPBL-204ENST00000504430 ANKS3Q6ZW76 656 aa6.73□□□□□ -1.33
NIPBL-204ENST00000504430 TTC30BQ8N4P2 665 aa6.73□□□□□ -1.33
NIPBL-204ENST00000504430 ENPP3O14638 875 aa6.73□□□□□ -1.33
NIPBL-204ENST00000504430 CDC45O75419 566 aa6.73□□□□□ -1.33
NIPBL-204ENST00000504430 SSBP05455 408 aaKnown RBP eCLIP6.73□□□□□ -1.33
NIPBL-204ENST00000504430 ATP2B2Q01814 1243 aa6.73□□□□□ -1.33
NIPBL-204ENST00000504430 DALRD3Q5D0E6 543 aaKnown RBP6.73□□□□□ -1.33
NIPBL-204ENST00000504430 C1orf131Q8NDD1 294 aaKnown RBP6.73□□□□□ -1.33
NIPBL-204ENST00000504430 INO80BQ9C086 356 aaPredicted RBP6.73□□□□□ -1.33
NIPBL-204ENST00000504430 RPGRIP1LQ68CZ1 1315 aa6.72□□□□□ -1.33
NIPBL-204ENST00000504430 GJA8P48165 433 aa6.72□□□□□ -1.33
NIPBL-204ENST00000504430 EMID1Q96A84 441 aaPredicted RBP6.72□□□□□ -1.33
NIPBL-204ENST00000504430 TSPAN10Q9H1Z9 355 aaPredicted RBP6.72□□□□□ -1.33
NIPBL-204ENST00000504430 DNM1Q05193 864 aaKnown RBP6.72□□□□□ -1.33
NIPBL-204ENST00000504430 RASA3Q14644 834 aa6.72□□□□□ -1.33
NIPBL-204ENST00000504430 CHRDL2Q6WN34 429 aa6.72□□□□□ -1.33
NIPBL-204ENST00000504430 HS2ST1Q7LGA3 356 aa6.72□□□□□ -1.33
NIPBL-204ENST00000504430 UBR7Q8N806 425 aa6.72□□□□□ -1.33
NIPBL-204ENST00000504430 CHMP4BQ9H444 224 aaKnown RBP6.72□□□□□ -1.33
NIPBL-204ENST00000504430 DYTNA2CJ06 578 aa6.71□□□□□ -1.33
NIPBL-204ENST00000504430 DNAJC7Q99615 494 aa6.71□□□□□ -1.33
NIPBL-204ENST00000504430 ST7Q9NRC1 585 aa6.71□□□□□ -1.33
NIPBL-204ENST00000504430 BSDC1Q9NW68 430 aaPredicted RBP6.71□□□□□ -1.33
NIPBL-204ENST00000504430 POLIQ9UNA4 740 aa6.71□□□□□ -1.33
NIPBL-204ENST00000504430 ATP6V1AP38606 617 aa6.71□□□□□ -1.34
NIPBL-204ENST00000504430 SCTRP47872 440 aa6.71□□□□□ -1.34
NIPBL-204ENST00000504430 NASPP49321 788 aaPredicted RBP6.71□□□□□ -1.34
NIPBL-204ENST00000504430 ENOX1Q8TC92 643 aaKnown RBP6.71□□□□□ -1.34
NIPBL-204ENST00000504430 GPRASP2Q96D09 838 aa6.71□□□□□ -1.34
NIPBL-204ENST00000504430 C8orf48Q96LL4 319 aa6.71□□□□□ -1.34
NIPBL-204ENST00000504430 DEPDC7Q96QD5 511 aa6.71□□□□□ -1.34
NIPBL-204ENST00000504430 SENP7Q9BQF6 1050 aa6.71□□□□□ -1.34
NIPBL-204ENST00000504430 PPCSQ9HAB8 311 aa6.71□□□□□ -1.34
NIPBL-204ENST00000504430 PTPRHQ9HD43 1115 aa6.71□□□□□ -1.34
NIPBL-204ENST00000504430 LRFN2Q9ULH4 789 aa6.71□□□□□ -1.34
NIPBL-204ENST00000504430 LEMD3Q9Y2U8 911 aa6.71□□□□□ -1.34
NIPBL-204ENST00000504430 NEFMP07197 916 aa6.71□□□□□ -1.34
NIPBL-204ENST00000504430 CD53P19397 219 aa6.71□□□□□ -1.34
NIPBL-204ENST00000504430 MAP7D1Q3KQU3 841 aa6.71□□□□□ -1.34
NIPBL-204ENST00000504430 C14orf80Q86SX3 495 aa6.71□□□□□ -1.34
NIPBL-204ENST00000504430 CELF2-AS1Q8N7Q2 184 aa6.71□□□□□ -1.34
NIPBL-204ENST00000504430 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.71□□□□□ -1.34
NIPBL-204ENST00000504430 VPS37DQ86XT2 251 aa6.7□□□□□ -1.34
NIPBL-204ENST00000504430 PRPF38AQ8NAV1 312 aaKnown RBP6.7□□□□□ -1.34
NIPBL-204ENST00000504430 FAM129BQ96TA1 746 aa6.7□□□□□ -1.34
NIPBL-204ENST00000504430 PAGR1Q9BTK6 254 aa6.7□□□□□ -1.34
NIPBL-204ENST00000504430 TRIM55Q9BYV6 548 aa6.7□□□□□ -1.34
NIPBL-204ENST00000504430 A0A1W2PRU2 124 aa6.7□□□□□ -1.34
NIPBL-204ENST00000504430 AXDND1Q5T1B0 1012 aaPredicted RBP6.7□□□□□ -1.34
NIPBL-204ENST00000504430 KANK3Q6NY19 840 aa6.7□□□□□ -1.34
NIPBL-204ENST00000504430 SDR16C5Q8N3Y7 309 aa6.7□□□□□ -1.34
NIPBL-204ENST00000504430 ANAPC16Q96DE5 110 aa6.7□□□□□ -1.34
NIPBL-204ENST00000504430 OSBPL7Q9BZF2 842 aa6.7□□□□□ -1.34
NIPBL-204ENST00000504430 TPX2Q9ULW0 747 aaKnown RBP6.7□□□□□ -1.34
NIPBL-204ENST00000504430 SAFB2Q14151 953 aaKnown RBP eCLIP6.7□□□□□ -1.34
NIPBL-204ENST00000504430 COX20Q5RI15 118 aa6.7□□□□□ -1.34
NIPBL-204ENST00000504430 ARMCX6Q7L4S7 300 aa6.7□□□□□ -1.34
NIPBL-204ENST00000504430 KIAA1468Q9P260 1216 aa6.7□□□□□ -1.34
NIPBL-204ENST00000504430 HMGB1P1B2RPK0 211 aaPredicted RBP6.69□□□□□ -1.34
NIPBL-204ENST00000504430 ATMINO43313 823 aaPredicted RBP6.69□□□□□ -1.34
NIPBL-204ENST00000504430 PLEKHG4Q58EX7 1191 aa6.69□□□□□ -1.34
NIPBL-204ENST00000504430 CCDC81Q6ZN84 652 aa6.69□□□□□ -1.34
NIPBL-204ENST00000504430 CACTIN-AS1Q8N1I8 211 aa6.69□□□□□ -1.34
NIPBL-204ENST00000504430 KBTBD4Q9NVX7 518 aa6.69□□□□□ -1.34
NIPBL-204ENST00000504430 SWAP70Q9UH65 585 aa6.69□□□□□ -1.34
NIPBL-204ENST00000504430 EFR3BQ9Y2G0 817 aa6.69□□□□□ -1.34
NIPBL-204ENST00000504430 BPNT1O95861 308 aa6.69□□□□□ -1.34
NIPBL-204ENST00000504430 NPR3P17342 541 aa6.69□□□□□ -1.34
NIPBL-204ENST00000504430 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.69□□□□□ -1.34
NIPBL-204ENST00000504430 C3orf67Q6ZVT6 689 aa6.69□□□□□ -1.34
NIPBL-204ENST00000504430 PACS2Q86VP3 889 aa6.69□□□□□ -1.34
NIPBL-204ENST00000504430 TRIM56Q9BRZ2 755 aaKnown RBP6.69□□□□□ -1.34
NIPBL-204ENST00000504430 NRDCO43847 1150 aa6.69□□□□□ -1.34
NIPBL-204ENST00000504430 DHX16O60231 1041 aaKnown RBP6.69□□□□□ -1.34
NIPBL-204ENST00000504430 PTCD1O75127 700 aaKnown RBP6.69□□□□□ -1.34
NIPBL-204ENST00000504430 TERF1P54274 439 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms