RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 CCDC30Q5VVM6 783 aa10.06□□□□□ -0.8
SKP2-203ENST00000504386 DUSP27Q5VZP5 1158 aa10.06□□□□□ -0.8
SKP2-203ENST00000504386 STK31Q9BXU1 1019 aa10.06□□□□□ -0.8
SKP2-203ENST00000504386 NYXQ9GZU5 481 aa10.06□□□□□ -0.8
SKP2-203ENST00000504386 C4AP0C0L4 1744 aa10.06□□□□□ -0.8
SKP2-203ENST00000504386 C10orf71Q711Q0 1435 aa10.06□□□□□ -0.8
SKP2-203ENST00000504386 MAP3K15Q6ZN16 1313 aa10.06□□□□□ -0.8
SKP2-203ENST00000504386 PRAMEF22A3QJZ6 481 aa10.05□□□□□ -0.8
SKP2-203ENST00000504386 NBPF26B4DH59 902 aa10.05□□□□□ -0.8
SKP2-203ENST00000504386 SERPINB2P05120 415 aa10.05□□□□□ -0.8
SKP2-203ENST00000504386 MYL6BP14649 208 aa10.05□□□□□ -0.8
SKP2-203ENST00000504386 PDE6BP35913 854 aa10.05□□□□□ -0.8
SKP2-203ENST00000504386 GOLGA2Q08379 1002 aa10.05□□□□□ -0.8
SKP2-203ENST00000504386 PARP10Q53GL7 1025 aa10.05□□□□□ -0.8
SKP2-203ENST00000504386 NBPF10Q6P3W6 841 aaKnown RBP10.05□□□□□ -0.8
SKP2-203ENST00000504386 TPTE2Q6XPS3 522 aa10.05□□□□□ -0.8
SKP2-203ENST00000504386 SMIM5Q71RC9 77 aa10.05□□□□□ -0.8
SKP2-203ENST00000504386 NBPF15Q8N660 670 aa10.05□□□□□ -0.8
SKP2-203ENST00000504386 CNBD1Q8NA66 436 aa10.05□□□□□ -0.8
SKP2-203ENST00000504386 RNF123Q5XPI4 1314 aa10.05□□□□□ -0.8
SKP2-203ENST00000504386 SCN7AQ01118 1682 aa10.04□□□□□ -0.8
SKP2-203ENST00000504386 DDX58O95786 925 aaKnown RBP10.04□□□□□ -0.8
SKP2-203ENST00000504386 HSP90B1P14625 803 aaKnown RBP10.04□□□□□ -0.8
SKP2-203ENST00000504386 GTF2E1P29083 439 aaPredicted RBP10.04□□□□□ -0.8
SKP2-203ENST00000504386 PPP1R42Q7Z4L9 355 aa10.04□□□□□ -0.8
SKP2-203ENST00000504386 NBPF5PQ86XG9 351 aaPredicted RBP10.04□□□□□ -0.8
SKP2-203ENST00000504386 NIP7Q9Y221 180 aaKnown RBP eCLIP10.04□□□□□ -0.8
SKP2-203ENST00000504386 IBTKQ9P2D0 1353 aaPredicted RBP10.03□□□□□ -0.8
SKP2-203ENST00000504386 DDR1Q08345 913 aa10.03□□□□□ -0.8
SKP2-203ENST00000504386 TBC1D9BQ66K14 1250 aa10.03□□□□□ -0.8
SKP2-203ENST00000504386 SAMD1Q6SPF0 538 aaPredicted RBP10.03□□□□□ -0.8
SKP2-203ENST00000504386 GIGYF2Q6Y7W6 1299 aaKnown RBP10.03□□□□□ -0.8
SKP2-203ENST00000504386 BICDL1Q6ZP65 573 aa10.03□□□□□ -0.8
SKP2-203ENST00000504386 PELP1Q8IZL8 1130 aaKnown RBP10.03□□□□□ -0.8
SKP2-203ENST00000504386 BRIP1Q9BX63 1249 aa10.03□□□□□ -0.8
SKP2-203ENST00000504386 BCL2L12Q9HB09 334 aa10.03□□□□□ -0.8
SKP2-203ENST00000504386 PIM2Q9P1W9 311 aa10.03□□□□□ -0.8
SKP2-203ENST00000504386 ATP10DQ9P241 1426 aa10.03□□□□□ -0.8
SKP2-203ENST00000504386 E9PSI1 815 aa10.02□□□□□ -0.81
SKP2-203ENST00000504386 H0YIN7 160 aa10.02□□□□□ -0.81
SKP2-203ENST00000504386 PIP4K2AP48426 406 aaPredicted RBP10.02□□□□□ -0.81
SKP2-203ENST00000504386 TWISTNBQ3B726 338 aaPredicted RBP10.02□□□□□ -0.81
SKP2-203ENST00000504386 PLBD2Q8NHP8 589 aa10.02□□□□□ -0.81
SKP2-203ENST00000504386 CHPF2Q9P2E5 772 aa10.02□□□□□ -0.81
SKP2-203ENST00000504386 PDIA6Q15084 440 aa10.01□□□□□ -0.81
SKP2-203ENST00000504386 SOGA3Q5TF21 947 aa10.01□□□□□ -0.81
SKP2-203ENST00000504386 COPS6Q7L5N1 327 aa10.01□□□□□ -0.81
SKP2-203ENST00000504386 NLGN2Q8NFZ4 835 aa10.01□□□□□ -0.81
SKP2-203ENST00000504386 ZNF428Q96B54 188 aa10.01□□□□□ -0.81
SKP2-203ENST00000504386 ZBTB3Q9H5J0 574 aa10.01□□□□□ -0.81
SKP2-203ENST00000504386 FANCIQ9NVI1 1328 aa10.01□□□□□ -0.81
SKP2-203ENST00000504386 PXDNLA1KZ92 1463 aa10□□□□□ -0.81
SKP2-203ENST00000504386 DALRD3Q5D0E6 543 aaKnown RBP10□□□□□ -0.81
SKP2-203ENST00000504386 PRR5LQ6MZQ0 368 aa10□□□□□ -0.81
SKP2-203ENST00000504386 ANKRD13DQ6ZTN6 518 aa10□□□□□ -0.81
SKP2-203ENST00000504386 XAGE3Q8WTP9 111 aa10□□□□□ -0.81
SKP2-203ENST00000504386 NECTIN2Q92692 538 aa10□□□□□ -0.81
SKP2-203ENST00000504386 TSR2Q969E8 191 aaKnown RBP10□□□□□ -0.81
SKP2-203ENST00000504386 CNKSR1Q969H4 720 aa10□□□□□ -0.81
SKP2-203ENST00000504386 SALL2Q9Y467 1007 aaPredicted RBP10□□□□□ -0.81
SKP2-203ENST00000504386 BCORQ6W2J9 1755 aa10□□□□□ -0.81
SKP2-203ENST00000504386 KIF13BQ9NQT8 1826 aa9.99□□□□□ -0.81
SKP2-203ENST00000504386 ELL2O00472 640 aaPredicted RBP9.99□□□□□ -0.81
SKP2-203ENST00000504386 CT47B1P0C2W7 299 aaPredicted RBP9.99□□□□□ -0.81
SKP2-203ENST00000504386 DPEP1P16444 411 aa9.99□□□□□ -0.81
SKP2-203ENST00000504386 NEXNQ0ZGT2 675 aa9.99□□□□□ -0.81
SKP2-203ENST00000504386 AIMP1Q12904 312 aaKnown RBP9.99□□□□□ -0.81
SKP2-203ENST00000504386 KRT24Q2M2I5 525 aa9.99□□□□□ -0.81
SKP2-203ENST00000504386 TTLL7Q6ZT98 887 aa9.99□□□□□ -0.81
SKP2-203ENST00000504386 C2CD5Q86YS7 1000 aa9.99□□□□□ -0.81
SKP2-203ENST00000504386 TTLL6Q8N841 843 aa9.99□□□□□ -0.81
SKP2-203ENST00000504386 UTP14AQ9BVJ6 771 aaKnown RBP9.99□□□□□ -0.81
SKP2-203ENST00000504386 A0A0G2JLW4 131 aa9.98□□□□□ -0.81
SKP2-203ENST00000504386 TCIRG1Q13488 830 aa9.98□□□□□ -0.81
SKP2-203ENST00000504386 STYK1Q6J9G0 422 aa9.98□□□□□ -0.81
SKP2-203ENST00000504386 LRP10Q7Z4F1 713 aa9.98□□□□□ -0.81
SKP2-203ENST00000504386 RIC3Q7Z5B4 369 aa9.98□□□□□ -0.81
SKP2-203ENST00000504386 ZNF34Q8IZ26 560 aa9.98□□□□□ -0.81
SKP2-203ENST00000504386 C8orf58Q8NAV2 365 aa9.98□□□□□ -0.81
SKP2-203ENST00000504386 MASTLQ96GX5 879 aa9.98□□□□□ -0.81
SKP2-203ENST00000504386 TMX4Q9H1E5 349 aaPredicted RBP9.98□□□□□ -0.81
SKP2-203ENST00000504386 BCS1LQ9Y276 419 aa9.98□□□□□ -0.81
SKP2-203ENST00000504386 ZNF521Q96K83 1311 aa9.98□□□□□ -0.81
SKP2-203ENST00000504386 NRXN2Q9P2S2 1712 aa9.98□□□□□ -0.81
SKP2-203ENST00000504386 RIC1Q4ADV7 1423 aa9.98□□□□□ -0.81
SKP2-203ENST00000504386 NPR1P16066 1061 aa9.97□□□□□ -0.81
SKP2-203ENST00000504386 ALDH1B1P30837 517 aa9.97□□□□□ -0.81
SKP2-203ENST00000504386 TRIM28Q13263 835 aaKnown RBP9.97□□□□□ -0.81
SKP2-203ENST00000504386 HLFQ16534 295 aa9.97□□□□□ -0.81
SKP2-203ENST00000504386 PROSER3Q2NL68 480 aa9.97□□□□□ -0.81
SKP2-203ENST00000504386 GRIPAP1Q4V328 841 aa9.97□□□□□ -0.81
SKP2-203ENST00000504386 MIER1Q8N108 512 aa9.97□□□□□ -0.81
SKP2-203ENST00000504386 SH3TC1Q8TE82 1336 aa9.97□□□□□ -0.81
SKP2-203ENST00000504386 ANXA1P04083 346 aa9.96□□□□□ -0.82
SKP2-203ENST00000504386 GPTP24298 496 aa9.96□□□□□ -0.82
SKP2-203ENST00000504386 YY1P25490 414 aa9.96□□□□□ -0.82
SKP2-203ENST00000504386 EXOSC9Q06265 439 aaKnown RBP9.96□□□□□ -0.82
SKP2-203ENST00000504386 ZNF622Q969S3 477 aaKnown RBP eCLIP9.96□□□□□ -0.82
SKP2-203ENST00000504386 NLRP3Q96P20 1036 aa9.96□□□□□ -0.82
SKP2-203ENST00000504386 KLRG2A4D1S0 409 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms