RNA–Protein interactions for RNA: ENST00000504339.1

LINC02239-201, Transcript of long intergenic non-protein coding RNA 2239, humanhuman

TSL 1 (best) BASIC

Gene LINC02239, Length 2,290 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02239-201ENST00000504339 DDX58O95786 925 aaKnown RBP11.1□□□□□ -0.63
LINC02239-201ENST00000504339 IL2RBP14784 551 aa11.1□□□□□ -0.63
LINC02239-201ENST00000504339 ANKRD13DQ6ZTN6 518 aa11.1□□□□□ -0.63
LINC02239-201ENST00000504339 CHMP5Q9NZZ3 219 aa11.1□□□□□ -0.63
LINC02239-201ENST00000504339 USP42Q9H9J4 1324 aaKnown RBP11.1□□□□□ -0.63
LINC02239-201ENST00000504339 SASH1O94885 1247 aa11.1□□□□□ -0.63
LINC02239-201ENST00000504339 MAP4K4O95819 1239 aaPredicted RBP11.1□□□□□ -0.63
LINC02239-201ENST00000504339 JARID2Q92833 1246 aaPredicted RBP11.1□□□□□ -0.63
LINC02239-201ENST00000504339 RILPL2Q969X0 211 aa11.1□□□□□ -0.63
LINC02239-201ENST00000504339 MYD88Q99836 296 aa11.1□□□□□ -0.63
LINC02239-201ENST00000504339 SHANK3Q9BYB0 1731 aa11.09□□□□□ -0.63
LINC02239-201ENST00000504339 ERVV-2B6SEH9 535 aa11.09□□□□□ -0.63
LINC02239-201ENST00000504339 DDX54Q8TDD1 881 aaKnown RBP11.09□□□□□ -0.63
LINC02239-201ENST00000504339 KCPQ6ZWJ8 1503 aa11.09□□□□□ -0.63
LINC02239-201ENST00000504339 TRIM6-TRIM34B2RNG4 842 aa11.09□□□□□ -0.63
LINC02239-201ENST00000504339 REC8O95072 547 aa11.09□□□□□ -0.63
LINC02239-201ENST00000504339 RABEP1Q15276 862 aa11.09□□□□□ -0.63
LINC02239-201ENST00000504339 CASC1Q6TDU7 716 aa11.09□□□□□ -0.63
LINC02239-201ENST00000504339 KLHDC4Q8TBB5 520 aa11.09□□□□□ -0.63
LINC02239-201ENST00000504339 RTN4Q9NQC3 1192 aaKnown RBP11.09□□□□□ -0.63
LINC02239-201ENST00000504339 PALD1Q9ULE6 856 aa11.09□□□□□ -0.63
LINC02239-201ENST00000504339 CASP7P55210 303 aa11.08□□□□□ -0.64
LINC02239-201ENST00000504339 FOXD4L1Q9NU39 408 aa11.08□□□□□ -0.64
LINC02239-201ENST00000504339 A1BGP04217 495 aa11.07□□□□□ -0.64
LINC02239-201ENST00000504339 HSP90AB4PQ58FF6 505 aa11.07□□□□□ -0.64
LINC02239-201ENST00000504339 TNS2Q63HR2 1409 aa11.07□□□□□ -0.64
LINC02239-201ENST00000504339 ATP5J2-PTCD1G3V325 749 aa11.07□□□□□ -0.64
LINC02239-201ENST00000504339 PTCD1O75127 700 aaKnown RBP11.07□□□□□ -0.64
LINC02239-201ENST00000504339 TTLL7Q6ZT98 887 aa11.07□□□□□ -0.64
LINC02239-201ENST00000504339 EAF2Q96CJ1 260 aaPredicted RBP11.07□□□□□ -0.64
LINC02239-201ENST00000504339 BRPF3Q9ULD4 1205 aa11.07□□□□□ -0.64
LINC02239-201ENST00000504339 EIF5BO60841 1220 aaKnown RBP11.06□□□□□ -0.64
LINC02239-201ENST00000504339 MCM4P33991 863 aa11.06□□□□□ -0.64
LINC02239-201ENST00000504339 RFX5P48382 616 aaPredicted RBP11.06□□□□□ -0.64
LINC02239-201ENST00000504339 EVA1CP58658 441 aa11.06□□□□□ -0.64
LINC02239-201ENST00000504339 BTG4Q9NY30 223 aa11.06□□□□□ -0.64
LINC02239-201ENST00000504339 UBR2Q8IWV8 1755 aa11.06□□□□□ -0.64
LINC02239-201ENST00000504339 PLBD2Q8NHP8 589 aa11.06□□□□□ -0.64
LINC02239-201ENST00000504339 IL17RAQ96F46 866 aa11.06□□□□□ -0.64
LINC02239-201ENST00000504339 TLR7Q9NYK1 1049 aaKnown RBP11.06□□□□□ -0.64
LINC02239-201ENST00000504339 PAPPAQ13219 1627 aa11.05□□□□□ -0.64
LINC02239-201ENST00000504339 NEXNQ0ZGT2 675 aa11.05□□□□□ -0.64
LINC02239-201ENST00000504339 RABL6Q3YEC7 729 aaPredicted RBP11.05□□□□□ -0.64
LINC02239-201ENST00000504339 TOGARAM1Q9Y4F4 1720 aa11.05□□□□□ -0.64
LINC02239-201ENST00000504339 TTC41PQ6P2S7 1318 aa11.05□□□□□ -0.64
LINC02239-201ENST00000504339 OS9Q13438 667 aaPredicted RBP11.05□□□□□ -0.64
LINC02239-201ENST00000504339 RAB3GAP1Q15042 981 aa11.05□□□□□ -0.64
LINC02239-201ENST00000504339 UBE3BQ7Z3V4 1068 aa11.05□□□□□ -0.64
LINC02239-201ENST00000504339 CLASRPQ8N2M8 674 aaKnown RBP11.05□□□□□ -0.64
LINC02239-201ENST00000504339 TNPO1Q92973 898 aaKnown RBP11.05□□□□□ -0.64
LINC02239-201ENST00000504339 SIL1Q9H173 461 aa11.05□□□□□ -0.64
LINC02239-201ENST00000504339 ANO2Q9NQ90 1003 aa11.05□□□□□ -0.64
LINC02239-201ENST00000504339 SGSM2O43147 1006 aa11.04□□□□□ -0.64
LINC02239-201ENST00000504339 PTPN12Q05209 780 aaKnown RBP11.04□□□□□ -0.64
LINC02239-201ENST00000504339 PIGBQ92521 554 aa11.04□□□□□ -0.64
LINC02239-201ENST00000504339 ECHDC1Q9NTX5 307 aa11.04□□□□□ -0.64
LINC02239-201ENST00000504339 ASAP1Q9ULH1 1129 aa11.04□□□□□ -0.64
LINC02239-201ENST00000504339 CIZ1Q9ULV3 898 aaPredicted RBP11.04□□□□□ -0.64
LINC02239-201ENST00000504339 HDAC5Q9UQL6 1122 aa11.04□□□□□ -0.64
LINC02239-201ENST00000504339 ERBB4Q15303 1308 aa11.04□□□□□ -0.64
LINC02239-201ENST00000504339 LAMB4A4D0S4 1761 aa11.04□□□□□ -0.64
LINC02239-201ENST00000504339 COL15A1P39059 1388 aa11.04□□□□□ -0.64
LINC02239-201ENST00000504339 DISP2A7MBM2 1401 aa11.04□□□□□ -0.64
LINC02239-201ENST00000504339 GLRX3O76003 335 aaKnown RBP11.04□□□□□ -0.64
LINC02239-201ENST00000504339 AACSQ86V21 672 aa11.04□□□□□ -0.64
LINC02239-201ENST00000504339 ERC1Q8IUD2 1116 aa11.04□□□□□ -0.64
LINC02239-201ENST00000504339 ARFGEF2Q9Y6D5 1785 aa11.03□□□□□ -0.64
LINC02239-201ENST00000504339 A0A087WZG4 1122 aa11.03□□□□□ -0.64
LINC02239-201ENST00000504339 H7C1W4 665 aa11.03□□□□□ -0.64
LINC02239-201ENST00000504339 FOXO4P98177 505 aa11.03□□□□□ -0.64
LINC02239-201ENST00000504339 LSG1Q9H089 658 aaKnown RBP11.03□□□□□ -0.64
LINC02239-201ENST00000504339 CCDC8Q9H0W5 538 aaPredicted RBP11.03□□□□□ -0.64
LINC02239-201ENST00000504339 COPRSQ9NQ92 184 aa11.03□□□□□ -0.64
LINC02239-201ENST00000504339 ZGPATQ8N5A5 531 aaKnown RBP11.02□□□□□ -0.64
LINC02239-201ENST00000504339 IFIT2P09913 472 aaKnown RBP11.02□□□□□ -0.65
LINC02239-201ENST00000504339 SSFA2P28290 1259 aa11.02□□□□□ -0.65
LINC02239-201ENST00000504339 HSPA4P34932 840 aa11.02□□□□□ -0.65
LINC02239-201ENST00000504339 G3BP1Q13283 466 aaKnown RBP eCLIP11.02□□□□□ -0.65
LINC02239-201ENST00000504339 PKP1Q13835 747 aa11.02□□□□□ -0.65
LINC02239-201ENST00000504339 CNTROBQ8N137 903 aa11.02□□□□□ -0.65
LINC02239-201ENST00000504339 SLC4A9Q96Q91 983 aa11.02□□□□□ -0.65
LINC02239-201ENST00000504339 ATG3Q9NT62 314 aa11.02□□□□□ -0.65
LINC02239-201ENST00000504339 NEK4P51957 841 aa11.01□□□□□ -0.65
LINC02239-201ENST00000504339 ANAPC15P60006 121 aa11.01□□□□□ -0.65
LINC02239-201ENST00000504339 CWC27Q6UX04 472 aaKnown RBP11.01□□□□□ -0.65
LINC02239-201ENST00000504339 ZBTB3Q9H5J0 574 aa11.01□□□□□ -0.65
LINC02239-201ENST00000504339 CYP2E1P05181 493 aaPredicted RBP11.01□□□□□ -0.65
LINC02239-201ENST00000504339 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
LINC02239-201ENST00000504339 RAD50Q92878 1312 aa11.01□□□□□ -0.65
LINC02239-201ENST00000504339 COL16A1Q07092 1604 aaPredicted RBP11.01□□□□□ -0.65
LINC02239-201ENST00000504339 ROBO1Q9Y6N7 1651 aa11.01□□□□□ -0.65
LINC02239-201ENST00000504339 NUP188Q5SRE5 1749 aa11□□□□□ -0.65
LINC02239-201ENST00000504339 EPB41L2O43491 1005 aaKnown RBP11□□□□□ -0.65
LINC02239-201ENST00000504339 ST18O60284 1047 aa11□□□□□ -0.65
LINC02239-201ENST00000504339 LMBR1LQ6UX01 489 aa11□□□□□ -0.65
LINC02239-201ENST00000504339 DNAJC10Q8IXB1 793 aa11□□□□□ -0.65
LINC02239-201ENST00000504339 TMOD3Q9NYL9 352 aa11□□□□□ -0.65
LINC02239-201ENST00000504339 HSP90AA1P07900 732 aaKnown RBP11□□□□□ -0.65
LINC02239-201ENST00000504339 PTH1RQ03431 593 aa11□□□□□ -0.65
LINC02239-201ENST00000504339 TFCP2Q12800 502 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms