RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-233ENST00000504203 AIMP1Q12904 312 aaKnown RBP15.86■□□□□ 0.13
MATR3-233ENST00000504203 CUL4AQ13619 759 aa15.86■□□□□ 0.13
MATR3-233ENST00000504203 CLASRPQ8N2M8 674 aaKnown RBP15.86■□□□□ 0.13
MATR3-233ENST00000504203 ZNF496Q96IT1 587 aaPredicted RBP15.86■□□□□ 0.13
MATR3-233ENST00000504203 ZDHHC9Q9Y397 364 aa15.86■□□□□ 0.13
MATR3-233ENST00000504203 GLRX3O76003 335 aaKnown RBP15.86■□□□□ 0.13
MATR3-233ENST00000504203 OS9Q13438 667 aaPredicted RBP15.86■□□□□ 0.13
MATR3-233ENST00000504203 CHRNA2Q15822 529 aa15.86■□□□□ 0.13
MATR3-233ENST00000504203 LRP10Q7Z4F1 713 aa15.86■□□□□ 0.13
MATR3-233ENST00000504203 ERC1Q8IUD2 1116 aa15.86■□□□□ 0.13
MATR3-233ENST00000504203 DCAF5Q96JK2 942 aa15.86■□□□□ 0.13
MATR3-233ENST00000504203 PA2G4Q9UQ80 394 aaKnown RBP15.86■□□□□ 0.13
MATR3-233ENST00000504203 CSB-PGBD3P0DP91 1061 aa15.85■□□□□ 0.13
MATR3-233ENST00000504203 LARP1Q6PKG0 1096 aaKnown RBP15.85■□□□□ 0.13
MATR3-233ENST00000504203 RAD50Q92878 1312 aa15.85■□□□□ 0.13
MATR3-233ENST00000504203 MRE11P49959 708 aa15.84■□□□□ 0.13
MATR3-233ENST00000504203 BICC1Q9H694 974 aaKnown RBP15.84■□□□□ 0.13
MATR3-233ENST00000504203 RTN4Q9NQC3 1192 aaKnown RBP15.84■□□□□ 0.13
MATR3-233ENST00000504203 RIC3Q7Z5B4 369 aa15.84■□□□□ 0.13
MATR3-233ENST00000504203 LSG1Q9H089 658 aaKnown RBP15.84■□□□□ 0.13
MATR3-233ENST00000504203 ECHDC1Q9NTX5 307 aa15.84■□□□□ 0.13
MATR3-233ENST00000504203 KLHL40Q2TBA0 621 aa15.83■□□□□ 0.13
MATR3-233ENST00000504203 XAGE3Q8WTP9 111 aa15.83■□□□□ 0.13
MATR3-233ENST00000504203 XIRP1Q702N8 1843 aaKnown RBP15.83■□□□□ 0.12
MATR3-233ENST00000504203 NEURL1BA8MQ27 555 aa15.83■□□□□ 0.12
MATR3-233ENST00000504203 SASH1O94885 1247 aa15.83■□□□□ 0.12
MATR3-233ENST00000504203 SNRPA1P09661 255 aaKnown RBP15.83■□□□□ 0.12
MATR3-233ENST00000504203 COPS6Q7L5N1 327 aa15.83■□□□□ 0.12
MATR3-233ENST00000504203 INTS4Q96HW7 963 aaKnown RBP15.83■□□□□ 0.12
MATR3-233ENST00000504203 MYL6BP14649 208 aa15.82■□□□□ 0.12
MATR3-233ENST00000504203 GCKRQ14397 625 aa15.82■□□□□ 0.12
MATR3-233ENST00000504203 METTL22Q9BUU2 404 aaPredicted RBP15.82■□□□□ 0.12
MATR3-233ENST00000504203 USP16Q9Y5T5 823 aa15.82■□□□□ 0.12
MATR3-233ENST00000504203 GLI3P10071 1580 aa15.82■□□□□ 0.12
MATR3-233ENST00000504203 ARXQ96QS3 562 aa15.82■□□□□ 0.12
MATR3-233ENST00000504203 PANK2Q9BZ23 570 aa15.82■□□□□ 0.12
MATR3-233ENST00000504203 UPF3BQ9BZI7 483 aaKnown RBP15.82■□□□□ 0.12
MATR3-233ENST00000504203 GRPEL1Q9HAV7 217 aa15.82■□□□□ 0.12
MATR3-233ENST00000504203 LMBRD1Q9NUN5 540 aa15.82■□□□□ 0.12
MATR3-233ENST00000504203 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.82■□□□□ 0.12
MATR3-233ENST00000504203 PARP4Q9UKK3 1724 aaKnown RBP15.82■□□□□ 0.12
MATR3-233ENST00000504203 NEXNQ0ZGT2 675 aa15.81■□□□□ 0.12
MATR3-233ENST00000504203 MCTP1Q6DN14 999 aa15.81■□□□□ 0.12
MATR3-233ENST00000504203 GAS2L3Q86XJ1 694 aa15.81■□□□□ 0.12
MATR3-233ENST00000504203 IFIT2P09913 472 aaKnown RBP15.8■□□□□ 0.12
MATR3-233ENST00000504203 CWC27Q6UX04 472 aaKnown RBP15.8■□□□□ 0.12
MATR3-233ENST00000504203 TTC5Q8N0Z6 440 aa15.8■□□□□ 0.12
MATR3-233ENST00000504203 GPATCH3Q96I76 525 aa15.8■□□□□ 0.12
MATR3-233ENST00000504203 FMNL2Q96PY5 1086 aa15.8■□□□□ 0.12
MATR3-233ENST00000504203 SNX14Q9Y5W7 946 aa15.8■□□□□ 0.12
MATR3-233ENST00000504203 ANKRD13DQ6ZTN6 518 aa15.8■□□□□ 0.12
MATR3-233ENST00000504203 AACSQ86V21 672 aa15.8■□□□□ 0.12
MATR3-233ENST00000504203 EAF2Q96CJ1 260 aaPredicted RBP15.8■□□□□ 0.12
MATR3-233ENST00000504203 MYD88Q99836 296 aa15.8■□□□□ 0.12
MATR3-233ENST00000504203 DDX49Q9Y6V7 483 aaKnown RBP15.8■□□□□ 0.12
MATR3-233ENST00000504203 G3BP1Q13283 466 aaKnown RBP eCLIP15.79■□□□□ 0.124e-8■■□□□ 12.9
MATR3-233ENST00000504203 BRINP3Q76B58 766 aa15.79■□□□□ 0.12
MATR3-233ENST00000504203 BRD1O95696 1058 aa15.79■□□□□ 0.12
MATR3-233ENST00000504203 HSPA2P54652 639 aa15.79■□□□□ 0.12
MATR3-233ENST00000504203 EPHA10Q5JZY3 1008 aa15.79■□□□□ 0.12
MATR3-233ENST00000504203 EVI5LQ96CN4 794 aa15.79■□□□□ 0.12
MATR3-233ENST00000504203 COL15A1P39059 1388 aa15.78■□□□□ 0.12
MATR3-233ENST00000504203 RASEFQ8IZ41 740 aa15.78■□□□□ 0.12
MATR3-233ENST00000504203 FAM43AQ8N2R8 423 aa15.78■□□□□ 0.12
MATR3-233ENST00000504203 TTC14Q96N46 770 aa15.78■□□□□ 0.12
MATR3-233ENST00000504203 CABP4P57796 275 aa15.78■□□□□ 0.12
MATR3-233ENST00000504203 KIAA1211Q6ZU35 1233 aa15.78■□□□□ 0.12
MATR3-233ENST00000504203 RUFY2Q8WXA3 655 aa15.78■□□□□ 0.12
MATR3-233ENST00000504203 DIAPH3Q9NSV4 1193 aa15.78■□□□□ 0.12
MATR3-233ENST00000504203 LAMB4A4D0S4 1761 aa15.77■□□□□ 0.12
MATR3-233ENST00000504203 ARFGEF2Q9Y6D5 1785 aa15.76■□□□□ 0.11
MATR3-233ENST00000504203 WDR17Q8IZU2 1322 aa15.76■□□□□ 0.11
MATR3-233ENST00000504203 NOL8Q76FK4 1167 aaKnown RBP15.76■□□□□ 0.11
MATR3-233ENST00000504203 PIP4K2AP48426 406 aaPredicted RBP15.76■□□□□ 0.11
MATR3-233ENST00000504203 KCNB2Q92953 911 aa15.76■□□□□ 0.11
MATR3-233ENST00000504203 RFX5P48382 616 aaPredicted RBP15.75■□□□□ 0.11
MATR3-233ENST00000504203 PTH1RQ03431 593 aa15.75■□□□□ 0.11
MATR3-233ENST00000504203 RABL6Q3YEC7 729 aaPredicted RBP15.75■□□□□ 0.11
MATR3-233ENST00000504203 KLHDC4Q8TBB5 520 aa15.75■□□□□ 0.11
MATR3-233ENST00000504203 CCDC8Q9H0W5 538 aaPredicted RBP15.75■□□□□ 0.11
MATR3-233ENST00000504203 COPRSQ9NQ92 184 aa15.75■□□□□ 0.11
MATR3-233ENST00000504203 TLR7Q9NYK1 1049 aaKnown RBP15.75■□□□□ 0.11
MATR3-233ENST00000504203 AFDNP55196 1824 aaKnown RBP15.75■□□□□ 0.11
MATR3-233ENST00000504203 SOS2Q07890 1332 aaPredicted RBP15.75■□□□□ 0.11
MATR3-233ENST00000504203 SIL1Q9H173 461 aa15.75■□□□□ 0.11
MATR3-233ENST00000504203 SNRKQ9NRH2 765 aa15.75■□□□□ 0.11
MATR3-233ENST00000504203 ERBB4Q15303 1308 aa15.74■□□□□ 0.11
MATR3-233ENST00000504203 PCDH11XQ9BZA7 1347 aa15.74■□□□□ 0.11
MATR3-233ENST00000504203 PCDH11YQ9BZA8 1340 aa15.74■□□□□ 0.11
MATR3-233ENST00000504203 UBR2Q8IWV8 1755 aa15.74■□□□□ 0.11
MATR3-233ENST00000504203 PRPF40AO75400 957 aaKnown RBP15.74■□□□□ 0.11
MATR3-233ENST00000504203 CASP7P55210 303 aa15.74■□□□□ 0.11
MATR3-233ENST00000504203 ZNF445P59923 1031 aa15.74■□□□□ 0.11
MATR3-233ENST00000504203 PLBD2Q8NHP8 589 aa15.74■□□□□ 0.11
MATR3-233ENST00000504203 CHAMP1Q96JM3 812 aa15.74■□□□□ 0.11
MATR3-233ENST00000504203 PRDM11Q9NQV5 511 aa15.74■□□□□ 0.11
MATR3-233ENST00000504203 COL5A2P05997 1499 aaPredicted RBP15.73■□□□□ 0.11
MATR3-233ENST00000504203 HIP1O00291 1037 aa15.73■□□□□ 0.11
MATR3-233ENST00000504203 AK2P54819 239 aa15.73■□□□□ 0.11
MATR3-233ENST00000504203 PTPN12Q05209 780 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms