RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 CCT2P78371 535 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-205ENST00000504178 SPTY2D1Q68D10 685 aaPredicted RBP8.32□□□□□ -1.08
SYNPO2-205ENST00000504178 CCDC144CPQ8IYA2 1237 aa8.32□□□□□ -1.08
SYNPO2-205ENST00000504178 FERMT2Q96AC1 680 aa8.32□□□□□ -1.08
SYNPO2-205ENST00000504178 MCM4P33991 863 aa8.32□□□□□ -1.08
SYNPO2-205ENST00000504178 CCDC12Q8WUD4 166 aaPredicted RBP8.32□□□□□ -1.08
SYNPO2-205ENST00000504178 FEZ1Q99689 392 aa8.32□□□□□ -1.08
SYNPO2-205ENST00000504178 HLA-DOAP06340 250 aa8.32□□□□□ -1.08
SYNPO2-205ENST00000504178 GSTO1P78417 241 aa8.32□□□□□ -1.08
SYNPO2-205ENST00000504178 FLIIQ13045 1269 aa8.32□□□□□ -1.08
SYNPO2-205ENST00000504178 VPS36Q86VN1 386 aa8.32□□□□□ -1.08
SYNPO2-205ENST00000504178 CABP5Q9NP86 173 aa8.32□□□□□ -1.08
SYNPO2-205ENST00000504178 PDE4BQ07343 736 aa8.32□□□□□ -1.08
SYNPO2-205ENST00000504178 CCDC91Q7Z6B0 441 aa8.32□□□□□ -1.08
SYNPO2-205ENST00000504178 CALML4Q96GE6 196 aa8.32□□□□□ -1.08
SYNPO2-205ENST00000504178 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.32□□□□□ -1.08
SYNPO2-205ENST00000504178 TMEM67Q5HYA8 995 aa8.31□□□□□ -1.08
SYNPO2-205ENST00000504178 ATP5J2-PTCD1G3V325 749 aa8.31□□□□□ -1.08
SYNPO2-205ENST00000504178 KIF20AO95235 890 aa8.31□□□□□ -1.08
SYNPO2-205ENST00000504178 BAG3O95817 575 aa8.31□□□□□ -1.08
SYNPO2-205ENST00000504178 LDHCP07864 332 aa8.31□□□□□ -1.08
SYNPO2-205ENST00000504178 TAF3Q5VWG9 929 aa8.31□□□□□ -1.08
SYNPO2-205ENST00000504178 CNNM3Q8NE01 707 aa8.31□□□□□ -1.08
SYNPO2-205ENST00000504178 NUP88Q99567 741 aaPredicted RBP8.31□□□□□ -1.08
SYNPO2-205ENST00000504178 DMRT2Q9Y5R5 561 aa8.31□□□□□ -1.08
SYNPO2-205ENST00000504178 ZSCAN12O43309 604 aa8.31□□□□□ -1.08
SYNPO2-205ENST00000504178 VAT1LQ9HCJ6 419 aa8.31□□□□□ -1.08
SYNPO2-205ENST00000504178 KIF5BP33176 963 aa8.31□□□□□ -1.08
SYNPO2-205ENST00000504178 PPM1FP49593 454 aaPredicted RBP8.31□□□□□ -1.08
SYNPO2-205ENST00000504178 SCAND2PQ9GZW5 306 aaPredicted RBP8.31□□□□□ -1.08
SYNPO2-205ENST00000504178 TOP1P11387 765 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-205ENST00000504178 DHX37Q8IY37 1157 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-205ENST00000504178 TMEM87AQ8NBN3 555 aa8.31□□□□□ -1.08
SYNPO2-205ENST00000504178 MYO1BO43795 1136 aa8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 KIF5CO60282 957 aa8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 GJB2P29033 226 aa8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 TSPY2A6NKD2 308 aa8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 CCDC152Q4G0S7 254 aa8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 GOPCQ9HD26 462 aa8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 LIMCH1Q9UPQ0 1083 aa8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 DHX29Q7Z478 1369 aaKnown RBP8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 MSH6P52701 1360 aa8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 MFSD6Q6ZSS7 791 aa8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 CTNNBL1Q8WYA6 563 aaPredicted RBP8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 AMPD3Q01432 767 aa8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 LDHAL6AQ6ZMR3 332 aa8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 MPHOSPH6Q99547 160 aaKnown RBP8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 ANKRD36BQ8N2N9 1353 aa8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 TNRQ92752 1358 aa8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 ACEP12821 1306 aa8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 CRNKL1Q9BZJ0 848 aaKnown RBP8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 CTAGE5O15320 804 aa8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 SFPQP23246 707 aaKnown RBP eCLIP8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 LARP6Q9BRS8 491 aaKnown RBP8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 MBIPQ9NS73 344 aa8.3□□□□□ -1.08
SYNPO2-205ENST00000504178 SNRPA1P09661 255 aaKnown RBP8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 PRKCSHP14314 528 aaPredicted RBP8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 METAP2P50579 478 aaKnown RBP eCLIP8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 C20orf194Q5TEA3 1177 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 NBPF6Q5VWK0 638 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 NBPF5PQ86XG9 351 aaPredicted RBP8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 NBPF4Q96M43 638 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 YEATS4O95619 227 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 FSIP1Q8NA03 581 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 CCDC113Q9H0I3 377 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 TMX1Q9H3N1 280 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 CLIP2Q9UDT6 1046 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 UQCRFS1P1P0C7P4 283 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 CHRNA2Q15822 529 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 TDRD12Q587J7 1177 aaKnown RBP8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 JARID2Q92833 1246 aaPredicted RBP8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 DRC1Q96MC2 740 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 SNRKQ9NRH2 765 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 MTIF2P46199 727 aaKnown RBP8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 NCOA7Q8NI08 942 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 ECHDC1Q9NTX5 307 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 SAMM50Q9Y512 469 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 IDI1Q13907 227 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 CCDC40Q4G0X9 1142 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 STXBP4Q6ZWJ1 553 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 DYDC1Q8WWB3 177 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 ACSBG1Q96GR2 724 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 GBP3Q9H0R5 595 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 USP16Q9Y5T5 823 aa8.29□□□□□ -1.08
SYNPO2-205ENST00000504178 USO1O60763 962 aaKnown RBP8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 TNNT1P13805 278 aa8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 ATP6V1AP38606 617 aa8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 HAND2P61296 217 aa8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 SLC26A6Q9BXS9 759 aa8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 TRIM27P14373 513 aa8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 IARSP41252 1262 aaKnown RBP8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 DNA2P51530 1060 aa8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 RAB11FIP4Q86YS3 637 aa8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 SYCP3Q8IZU3 236 aa8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 TCP11L1Q9NUJ3 509 aa8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 DISP3Q9P2K9 1392 aa8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 FAM83GA6ND36 823 aa8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 UBE3BQ7Z3V4 1068 aa8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 LUZP1Q86V48 1076 aa8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 FAM114A1Q8IWE2 563 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms