RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 SLC52A2Q9HAB3 445 aa11.8□□□□□ -0.52
PDLIM5-207ENST00000503974 CICQ96RK0 1608 aaPredicted RBP11.8□□□□□ -0.52
PDLIM5-207ENST00000503974 TSPYL1Q9H0U9 437 aa11.8□□□□□ -0.52
PDLIM5-207ENST00000503974 ISY1Q9ULR0 285 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-207ENST00000503974 TRIM6-TRIM34B2RNG4 842 aa11.79□□□□□ -0.52
PDLIM5-207ENST00000503974 ZSCAN30Q86W11 494 aa11.79□□□□□ -0.52
PDLIM5-207ENST00000503974 TRIM34Q9BYJ4 488 aa11.79□□□□□ -0.52
PDLIM5-207ENST00000503974 IL16Q14005 1332 aa11.79□□□□□ -0.52
PDLIM5-207ENST00000503974 ZNF831Q5JPB2 1677 aa11.79□□□□□ -0.52
PDLIM5-207ENST00000503974 LY75O60449 1722 aa11.79□□□□□ -0.52
PDLIM5-207ENST00000503974 CAPN2P17655 700 aa11.79□□□□□ -0.52
PDLIM5-207ENST00000503974 ANAPC15P60006 121 aa11.79□□□□□ -0.52
PDLIM5-207ENST00000503974 NBPF11Q86T75 865 aa11.79□□□□□ -0.52
PDLIM5-207ENST00000503974 THUMPD2Q9BTF0 503 aaKnown RBP11.79□□□□□ -0.52
PDLIM5-207ENST00000503974 KCNQ2O43526 872 aa11.78□□□□□ -0.52
PDLIM5-207ENST00000503974 PRIM1P49642 420 aaKnown RBP11.78□□□□□ -0.52
PDLIM5-207ENST00000503974 CABP4P57796 275 aa11.78□□□□□ -0.52
PDLIM5-207ENST00000503974 WDR63Q8IWG1 891 aa11.78□□□□□ -0.52
PDLIM5-207ENST00000503974 GPATCH11Q8N954 259 aa11.78□□□□□ -0.52
PDLIM5-207ENST00000503974 ACSBG1Q96GR2 724 aa11.78□□□□□ -0.52
PDLIM5-207ENST00000503974 GRPEL1Q9HAV7 217 aa11.78□□□□□ -0.52
PDLIM5-207ENST00000503974 BABAM1Q9NWV8 329 aa11.78□□□□□ -0.52
PDLIM5-207ENST00000503974 KCPQ6ZWJ8 1503 aa11.77□□□□□ -0.52
PDLIM5-207ENST00000503974 ZNF853P0CG23 659 aa11.77□□□□□ -0.52
PDLIM5-207ENST00000503974 SATB1Q01826 763 aa11.77□□□□□ -0.52
PDLIM5-207ENST00000503974 TEFQ10587 303 aa11.77□□□□□ -0.52
PDLIM5-207ENST00000503974 NFATC2IPQ8NCF5 419 aa11.77□□□□□ -0.52
PDLIM5-207ENST00000503974 PIGBQ92521 554 aa11.77□□□□□ -0.52
PDLIM5-207ENST00000503974 TMOD3Q9NYL9 352 aa11.77□□□□□ -0.52
PDLIM5-207ENST00000503974 SENP3-EIF4A1A0A087X0R7 540 aa11.77□□□□□ -0.53
PDLIM5-207ENST00000503974 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-207ENST00000503974 TTC36A6NLP5 189 aa11.76□□□□□ -0.53
PDLIM5-207ENST00000503974 TAF7Q15545 349 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-207ENST00000503974 ILDR2Q71H61 639 aa11.76□□□□□ -0.53
PDLIM5-207ENST00000503974 PTF1AQ7RTS3 328 aa11.76□□□□□ -0.53
PDLIM5-207ENST00000503974 IFT57Q9NWB7 429 aa11.76□□□□□ -0.53
PDLIM5-207ENST00000503974 CHL1O00533 1208 aa11.75□□□□□ -0.53
PDLIM5-207ENST00000503974 MPNDQ8N594 471 aa11.75□□□□□ -0.53
PDLIM5-207ENST00000503974 TIGD1Q96MW7 591 aa11.75□□□□□ -0.53
PDLIM5-207ENST00000503974 CEP83Q9Y592 693 aa11.75□□□□□ -0.53
PDLIM5-207ENST00000503974 KAT6BQ8WYB5 2073 aa11.75□□□□□ -0.53
PDLIM5-207ENST00000503974 ATP2B3Q16720 1220 aa11.75□□□□□ -0.53
PDLIM5-207ENST00000503974 ZNF500O60304 480 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-207ENST00000503974 TRIM37O94972 964 aa11.74□□□□□ -0.53
PDLIM5-207ENST00000503974 CT47A1Q5JQC4 288 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-207ENST00000503974 CC2D2BQ6DHV5 1058 aa11.74□□□□□ -0.53
PDLIM5-207ENST00000503974 SYTL4Q96C24 671 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-207ENST00000503974 TJP1Q07157 1748 aa11.74□□□□□ -0.53
PDLIM5-207ENST00000503974 HEG1Q9ULI3 1381 aa11.74□□□□□ -0.53
PDLIM5-207ENST00000503974 CCDC66A2RUB6 948 aa11.74□□□□□ -0.53
PDLIM5-207ENST00000503974 BTBD11A6QL63 1104 aa11.74□□□□□ -0.53
PDLIM5-207ENST00000503974 MAFGO15525 162 aa11.74□□□□□ -0.53
PDLIM5-207ENST00000503974 BRPF1P55201 1214 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-207ENST00000503974 GNAI1P63096 354 aa11.74□□□□□ -0.53
PDLIM5-207ENST00000503974 MAP2K1Q02750 393 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-207ENST00000503974 ZNF771Q7L3S4 317 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-207ENST00000503974 MYCBPQ99417 103 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-207ENST00000503974 ATG3Q9NT62 314 aa11.74□□□□□ -0.53
PDLIM5-207ENST00000503974 RREB1Q92766 1687 aa11.74□□□□□ -0.53
PDLIM5-207ENST00000503974 LAMB4A4D0S4 1761 aa11.73□□□□□ -0.53
PDLIM5-207ENST00000503974 PALLDQ8WX93 1383 aa11.73□□□□□ -0.53
PDLIM5-207ENST00000503974 GOLGA2Q08379 1002 aa11.73□□□□□ -0.53
PDLIM5-207ENST00000503974 ZNF790Q6PG37 636 aa11.73□□□□□ -0.53
PDLIM5-207ENST00000503974 SPINK5Q9NQ38 1064 aaPredicted RBP11.73□□□□□ -0.53
PDLIM5-207ENST00000503974 RAI14Q9P0K7 980 aa11.73□□□□□ -0.53
PDLIM5-207ENST00000503974 EP400Q96L91 3159 aa11.73□□□□□ -0.53
PDLIM5-207ENST00000503974 CCDC125Q86Z20 511 aa11.72□□□□□ -0.53
PDLIM5-207ENST00000503974 SMARCC1Q92922 1105 aaPredicted RBP11.72□□□□□ -0.53
PDLIM5-207ENST00000503974 ASAP1Q9ULH1 1129 aa11.72□□□□□ -0.53
PDLIM5-207ENST00000503974 KIF3AQ9Y496 699 aa11.72□□□□□ -0.53
PDLIM5-207ENST00000503974 COL5A3P25940 1745 aaPredicted RBP11.72□□□□□ -0.53
PDLIM5-207ENST00000503974 C5P01031 1676 aa11.72□□□□□ -0.53
PDLIM5-207ENST00000503974 GOLIM4O00461 696 aa11.72□□□□□ -0.53
PDLIM5-207ENST00000503974 PLSCR1O15162 318 aa11.72□□□□□ -0.53
PDLIM5-207ENST00000503974 SLFN5Q08AF3 891 aa11.72□□□□□ -0.53
PDLIM5-207ENST00000503974 NBPF9Q3BBW0 867 aa11.72□□□□□ -0.53
PDLIM5-207ENST00000503974 SASS6Q6UVJ0 657 aa11.72□□□□□ -0.53
PDLIM5-207ENST00000503974 TRMT2AQ8IZ69 625 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-207ENST00000503974 RNF217Q8TC41 542 aa11.72□□□□□ -0.53
PDLIM5-207ENST00000503974 MBIPQ9NS73 344 aa11.72□□□□□ -0.53
PDLIM5-207ENST00000503974 TAF1LQ8IZX4 1826 aa11.72□□□□□ -0.53
PDLIM5-207ENST00000503974 SLC39A6Q13433 755 aa11.71□□□□□ -0.53
PDLIM5-207ENST00000503974 PPP1R9BQ96SB3 815 aa11.71□□□□□ -0.53
PDLIM5-207ENST00000503974 TSPYL4Q9UJ04 414 aa11.71□□□□□ -0.53
PDLIM5-207ENST00000503974 KCNQ3O43525 872 aa11.71□□□□□ -0.54
PDLIM5-207ENST00000503974 MSNP26038 577 aaKnown RBP11.71□□□□□ -0.54
PDLIM5-207ENST00000503974 EIF4A1P60842 406 aaKnown RBP11.71□□□□□ -0.54
PDLIM5-207ENST00000503974 NCAPGQ9BPX3 1015 aa11.71□□□□□ -0.54
PDLIM5-207ENST00000503974 MIS18AQ9NYP9 233 aa11.71□□□□□ -0.54
PDLIM5-207ENST00000503974 CCDC172P0C7W6 258 aa11.7□□□□□ -0.54
PDLIM5-207ENST00000503974 TTC5Q8N0Z6 440 aa11.7□□□□□ -0.54
PDLIM5-207ENST00000503974 UPF1Q92900 1129 aaKnown RBP eCLIP11.7□□□□□ -0.542e-10■□□□□ 8.3
PDLIM5-207ENST00000503974 CDCA7LQ96GN5 454 aa11.69□□□□□ -0.54
PDLIM5-207ENST00000503974 ZNF496Q96IT1 587 aaPredicted RBP11.69□□□□□ -0.54
PDLIM5-207ENST00000503974 SLC4A9Q96Q91 983 aa11.69□□□□□ -0.54
PDLIM5-207ENST00000503974 SMC4Q9NTJ3 1288 aa11.69□□□□□ -0.54
PDLIM5-207ENST00000503974 NUP188Q5SRE5 1749 aa11.69□□□□□ -0.54
PDLIM5-207ENST00000503974 APBA3O96018 575 aa11.69□□□□□ -0.54
PDLIM5-207ENST00000503974 DUSP27Q5VZP5 1158 aa11.69□□□□□ -0.54
PDLIM5-207ENST00000503974 ZNF526Q8TF50 670 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms