RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 CAMTA2O94983 1202 aa21.32■■□□□ 1
DDR1-250ENST00000503628 VEGFBP49765 207 aa21.32■■□□□ 1
DDR1-250ENST00000503628 ST5P78524 1137 aa21.32■■□□□ 1
DDR1-250ENST00000503628 TEFQ10587 303 aa21.32■■□□□ 1
DDR1-250ENST00000503628 SOGA3Q5TF21 947 aa21.32■■□□□ 1
DDR1-250ENST00000503628 IL17REQ8NFR9 667 aa21.32■■□□□ 1
DDR1-250ENST00000503628 MASTLQ96GX5 879 aa21.32■■□□□ 1
DDR1-250ENST00000503628 CTCFP49711 727 aaPredicted RBP21.31■■□□□ 1
DDR1-250ENST00000503628 AIDAQ96BJ3 306 aa21.31■■□□□ 1
DDR1-250ENST00000503628 L3MBTL3Q96JM7 780 aaPredicted RBP21.31■■□□□ 1
DDR1-250ENST00000503628 ARFGEF2Q9Y6D5 1785 aa21.31■■□□□ 1
DDR1-250ENST00000503628 TMEM88BA6NKF7 163 aa21.3■■□□□ 1
DDR1-250ENST00000503628 ITGBL1O95965 494 aaPredicted RBP21.3■■□□□ 1
DDR1-250ENST00000503628 ZEB1P37275 1124 aaPredicted RBP21.3■■□□□ 1
DDR1-250ENST00000503628 NPM2Q86SE8 214 aaKnown RBP21.3■■□□□ 1
DDR1-250ENST00000503628 C7orf43Q8WVR3 580 aa21.29■■□□□ 1
DDR1-250ENST00000503628 GNAT3A8MTJ3 354 aa21.28■■□□□ 1
DDR1-250ENST00000503628 EAPPQ56P03 285 aaPredicted RBP21.28■■□□□ 1
DDR1-250ENST00000503628 SIPA1L3O60292 1781 aaPredicted RBP21.28■■□□□ 1
DDR1-250ENST00000503628 LBX1P52954 281 aa21.27■■□□□ 1
DDR1-250ENST00000503628 CCDC93Q567U6 631 aa21.27■■□□□ 1
DDR1-250ENST00000503628 DZIP3Q86Y13 1208 aaKnown RBP21.27■■□□□ 1
DDR1-250ENST00000503628 FMNL2Q96PY5 1086 aa21.27■■□□□ 1
DDR1-250ENST00000503628 WBP1LQ9NX94 342 aa21.27■■□□□ 1
DDR1-250ENST00000503628 CLEC11AQ9Y240 323 aa21.27■■□□□ 1
DDR1-250ENST00000503628 ZNF277Q9NRM2 450 aaPredicted RBP21.26■□□□□ 0.99
DDR1-250ENST00000503628 ZNF541Q9H0D2 1346 aa21.26■□□□□ 0.99
DDR1-250ENST00000503628 BCORQ6W2J9 1755 aa21.25■□□□□ 0.99
DDR1-250ENST00000503628 KCNQ3O43525 872 aa21.25■□□□□ 0.99
DDR1-250ENST00000503628 NBPF5PQ86XG9 351 aaPredicted RBP21.25■□□□□ 0.99
DDR1-250ENST00000503628 HACL1Q9UJ83 578 aa21.25■□□□□ 0.99
DDR1-250ENST00000503628 NPR1P16066 1061 aa21.24■□□□□ 0.99
DDR1-250ENST00000503628 PIP4K2AP48426 406 aaPredicted RBP21.24■□□□□ 0.99
DDR1-250ENST00000503628 FKBP4Q02790 459 aaKnown RBP eCLIP21.24■□□□□ 0.99
DDR1-250ENST00000503628 OLFM4Q6UX06 510 aa21.24■□□□□ 0.99
DDR1-250ENST00000503628 GAS2L2Q8NHY3 880 aa21.24■□□□□ 0.99
DDR1-250ENST00000503628 USP16Q9Y5T5 823 aa21.24■□□□□ 0.99
DDR1-250ENST00000503628 U2SURPO15042 1029 aaKnown RBP21.23■□□□□ 0.99
DDR1-250ENST00000503628 EPHX2P34913 555 aa21.23■□□□□ 0.99
DDR1-250ENST00000503628 DEFB115Q30KQ5 88 aa21.23■□□□□ 0.99
DDR1-250ENST00000503628 CC2D1BQ5T0F9 858 aaKnown RBP21.22■□□□□ 0.99
DDR1-250ENST00000503628 CLEC4GQ6UXB4 293 aa21.22■□□□□ 0.99
DDR1-250ENST00000503628 CNTROBQ8N137 903 aa21.22■□□□□ 0.99
DDR1-250ENST00000503628 ADAMTSL1Q8N6G6 1762 aa21.21■□□□□ 0.99
DDR1-250ENST00000503628 KLRG2A4D1S0 409 aaPredicted RBP21.21■□□□□ 0.99
DDR1-250ENST00000503628 RASSF10A6NK89 507 aa21.21■□□□□ 0.99
DDR1-250ENST00000503628 BTBD11A6QL63 1104 aa21.21■□□□□ 0.99
DDR1-250ENST00000503628 MAP1SQ66K74 1059 aaPredicted RBP21.21■□□□□ 0.99
DDR1-250ENST00000503628 HSPA8P11142 646 aaKnown RBP21.2■□□□□ 0.98
DDR1-250ENST00000503628 PNMA8AQ86V59 439 aaPredicted RBP21.2■□□□□ 0.98
DDR1-250ENST00000503628 RTKN2Q8IZC4 609 aa21.2■□□□□ 0.98
DDR1-250ENST00000503628 RNF123Q5XPI4 1314 aa21.2■□□□□ 0.98
DDR1-250ENST00000503628 PRAMEF22A3QJZ6 481 aa21.19■□□□□ 0.98
DDR1-250ENST00000503628 PER1O15534 1290 aaPredicted RBP21.19■□□□□ 0.98
DDR1-250ENST00000503628 TPTE2Q6XPS3 522 aa21.19■□□□□ 0.98
DDR1-250ENST00000503628 ABHD8Q96I13 439 aa21.19■□□□□ 0.98
DDR1-250ENST00000503628 KIF7Q2M1P5 1343 aa21.19■□□□□ 0.98
DDR1-250ENST00000503628 WDR33Q9C0J8 1336 aaKnown RBP21.19■□□□□ 0.98
DDR1-250ENST00000503628 CEMIPQ8WUJ3 1361 aa21.19■□□□□ 0.98
DDR1-250ENST00000503628 FZD9O00144 591 aa21.18■□□□□ 0.98
DDR1-250ENST00000503628 IARSP41252 1262 aaKnown RBP21.18■□□□□ 0.98
DDR1-250ENST00000503628 SYNE4Q8N205 404 aa21.18■□□□□ 0.98
DDR1-250ENST00000503628 ZNF652Q9Y2D9 606 aa21.18■□□□□ 0.98
DDR1-250ENST00000503628 FAM177BA6PVY3 158 aa21.17■□□□□ 0.98
DDR1-250ENST00000503628 MAP2K1Q02750 393 aaPredicted RBP21.17■□□□□ 0.98
DDR1-250ENST00000503628 ABT1Q9ULW3 272 aaKnown RBP21.17■□□□□ 0.98
DDR1-250ENST00000503628 NIP7Q9Y221 180 aaKnown RBP eCLIP21.17■□□□□ 0.98
DDR1-250ENST00000503628 COL3A1P02461 1466 aaPredicted RBP21.17■□□□□ 0.98
DDR1-250ENST00000503628 SLC34A2O95436 690 aa21.16■□□□□ 0.98
DDR1-250ENST00000503628 GPC2Q8N158 579 aa21.16■□□□□ 0.98
DDR1-250ENST00000503628 PHACTR3Q96KR7 559 aa21.16■□□□□ 0.98
DDR1-250ENST00000503628 ALDH1B1P30837 517 aa21.15■□□□□ 0.98
DDR1-250ENST00000503628 CNGB1Q14028 1251 aaPredicted RBP21.15■□□□□ 0.98
DDR1-250ENST00000503628 FAM161AQ3B820 660 aa21.15■□□□□ 0.98
DDR1-250ENST00000503628 SNRPA1P09661 255 aaKnown RBP21.14■□□□□ 0.97
DDR1-250ENST00000503628 DDX21Q9NR30 783 aaKnown RBP eCLIP21.14■□□□□ 0.97
DDR1-250ENST00000503628 NBPF26B4DH59 902 aa21.13■□□□□ 0.97
DDR1-250ENST00000503628 NBPF10Q6P3W6 841 aaKnown RBP21.13■□□□□ 0.97
DDR1-250ENST00000503628 NBPF15Q8N660 670 aa21.13■□□□□ 0.97
DDR1-250ENST00000503628 JDP2Q8WYK2 163 aa21.13■□□□□ 0.97
DDR1-250ENST00000503628 FMR1Q06787 632 aaKnown RBP eCLIP21.12■□□□□ 0.973e-7■■■□□ 15.5
DDR1-250ENST00000503628 HLFQ16534 295 aa21.12■□□□□ 0.97
DDR1-250ENST00000503628 GJA3Q9Y6H8 435 aa21.12■□□□□ 0.97
DDR1-250ENST00000503628 GTF2E1P29083 439 aaPredicted RBP21.11■□□□□ 0.97
DDR1-250ENST00000503628 PRKAR2BP31323 418 aa21.11■□□□□ 0.97
DDR1-250ENST00000503628 PSMD1Q99460 953 aa21.11■□□□□ 0.97
DDR1-250ENST00000503628 RGL2O15211 777 aa21.1■□□□□ 0.97
DDR1-250ENST00000503628 EIF6P56537 245 aaKnown RBP21.1■□□□□ 0.97
DDR1-250ENST00000503628 PAXIP1Q6ZW49 1069 aaPredicted RBP21.09■□□□□ 0.97
DDR1-250ENST00000503628 MCM10Q7L590 875 aa21.09■□□□□ 0.97
DDR1-250ENST00000503628 CAPNS2Q96L46 248 aa21.09■□□□□ 0.97
DDR1-250ENST00000503628 RSPH6AQ9H0K4 717 aa21.09■□□□□ 0.97
DDR1-250ENST00000503628 SNED1Q8TER0 1413 aa21.09■□□□□ 0.97
DDR1-250ENST00000503628 LTBP1Q14766 1721 aa21.09■□□□□ 0.97
DDR1-250ENST00000503628 COL4A5P29400 1685 aa21.09■□□□□ 0.97
DDR1-250ENST00000503628 CCDC85CA6NKD9 419 aa21.08■□□□□ 0.97
DDR1-250ENST00000503628 LMOD1P29536 600 aaPredicted RBP21.08■□□□□ 0.97
DDR1-250ENST00000503628 EPS15P42566 896 aa21.08■□□□□ 0.97
DDR1-250ENST00000503628 GRM1Q13255 1194 aa21.08■□□□□ 0.97
DDR1-250ENST00000503628 CYP4F22Q6NT55 531 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms