RNA–Protein interactions for RNA: ENST00000503547.1

NR1I3-218, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 535 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-218ENST00000503547 PRPF40BQ6NWY9 871 aaKnown RBP11.93□□□□□ -0.5
NR1I3-218ENST00000503547 DZIP3Q86Y13 1208 aaKnown RBP11.93□□□□□ -0.5
NR1I3-218ENST00000503547 CNKSR1Q969H4 720 aa11.93□□□□□ -0.5
NR1I3-218ENST00000503547 CFAP53Q96M91 514 aa11.93□□□□□ -0.5
NR1I3-218ENST00000503547 HSPA1AP0DMV8 641 aaKnown RBP11.92□□□□□ -0.5
NR1I3-218ENST00000503547 HSPA1BP0DMV9 641 aaKnown RBP11.92□□□□□ -0.5
NR1I3-218ENST00000503547 PRKAR2BP31323 418 aa11.92□□□□□ -0.5
NR1I3-218ENST00000503547 PIP4K2AP48426 406 aaPredicted RBP11.92□□□□□ -0.5
NR1I3-218ENST00000503547 NUP98P52948 1817 aa11.92□□□□□ -0.5
NR1I3-218ENST00000503547 KCNQ3O43525 872 aa11.91□□□□□ -0.5
NR1I3-218ENST00000503547 CAMTA2O94983 1202 aa11.91□□□□□ -0.5
NR1I3-218ENST00000503547 SOGA3Q5TF21 947 aa11.91□□□□□ -0.5
NR1I3-218ENST00000503547 STYK1Q6J9G0 422 aa11.91□□□□□ -0.5
NR1I3-218ENST00000503547 NBPF5PQ86XG9 351 aaPredicted RBP11.91□□□□□ -0.5
NR1I3-218ENST00000503547 RTF1Q92541 710 aaKnown RBP11.91□□□□□ -0.5
NR1I3-218ENST00000503547 MASTLQ96GX5 879 aa11.91□□□□□ -0.5
NR1I3-218ENST00000503547 ZNF652Q9Y2D9 606 aa11.91□□□□□ -0.5
NR1I3-218ENST00000503547 CEMIPQ8WUJ3 1361 aa11.91□□□□□ -0.5
NR1I3-218ENST00000503547 NPC1L1Q9UHC9 1359 aa11.91□□□□□ -0.5
NR1I3-218ENST00000503547 LTBP3Q9NS15 1303 aa11.9□□□□□ -0.5
NR1I3-218ENST00000503547 POTECB2RU33 542 aa11.9□□□□□ -0.5
NR1I3-218ENST00000503547 DDNO94850 711 aaPredicted RBP11.9□□□□□ -0.5
NR1I3-218ENST00000503547 SRGNP10124 158 aa11.9□□□□□ -0.5
NR1I3-218ENST00000503547 CHADLQ6NUI6 762 aa11.9□□□□□ -0.5
NR1I3-218ENST00000503547 PHACTR3Q96KR7 559 aa11.89□□□□□ -0.51
NR1I3-218ENST00000503547 RSPH6AQ9H0K4 717 aa11.89□□□□□ -0.51
NR1I3-218ENST00000503547 MKRN1Q9UHC7 482 aaKnown RBP11.89□□□□□ -0.51
NR1I3-218ENST00000503547 NUDCQ9Y266 331 aa11.89□□□□□ -0.51
NR1I3-218ENST00000503547 PRAMEF22A3QJZ6 481 aa11.88□□□□□ -0.51
NR1I3-218ENST00000503547 IQCA1LA6NCM1 817 aa11.88□□□□□ -0.51
NR1I3-218ENST00000503547 FAM177BA6PVY3 158 aa11.88□□□□□ -0.51
NR1I3-218ENST00000503547 SNRPA1P09661 255 aaKnown RBP11.88□□□□□ -0.51
NR1I3-218ENST00000503547 U2AF1L5P0DN76 240 aaPredicted RBP11.88□□□□□ -0.51
NR1I3-218ENST00000503547 U2AF1Q01081 240 aaKnown RBP eCLIP11.88□□□□□ -0.51
NR1I3-218ENST00000503547 CCDC93Q567U6 631 aa11.88□□□□□ -0.51
NR1I3-218ENST00000503547 MCM10Q7L590 875 aa11.88□□□□□ -0.51
NR1I3-218ENST00000503547 CREBZFQ9NS37 354 aa11.88□□□□□ -0.51
NR1I3-218ENST00000503547 USP16Q9Y5T5 823 aa11.88□□□□□ -0.51
NR1I3-218ENST00000503547 POTEIP0CG38 1075 aa11.87□□□□□ -0.51
NR1I3-218ENST00000503547 POTEJP0CG39 1038 aa11.87□□□□□ -0.51
NR1I3-218ENST00000503547 NPR1P16066 1061 aa11.87□□□□□ -0.51
NR1I3-218ENST00000503547 EAPPQ56P03 285 aaPredicted RBP11.87□□□□□ -0.51
NR1I3-218ENST00000503547 NIP7Q9Y221 180 aaKnown RBP eCLIP11.87□□□□□ -0.51
NR1I3-218ENST00000503547 KDM3BQ7LBC6 1761 aa11.87□□□□□ -0.51
NR1I3-218ENST00000503547 GTF2E1P29083 439 aaPredicted RBP11.86□□□□□ -0.51
NR1I3-218ENST00000503547 CLEC4GQ6UXB4 293 aa11.86□□□□□ -0.51
NR1I3-218ENST00000503547 TPTE2Q6XPS3 522 aa11.86□□□□□ -0.51
NR1I3-218ENST00000503547 LDHDQ86WU2 507 aa11.86□□□□□ -0.51
NR1I3-218ENST00000503547 ZNF277Q9NRM2 450 aaPredicted RBP11.86□□□□□ -0.51
NR1I3-218ENST00000503547 FKBP4Q02790 459 aaKnown RBP eCLIP11.85□□□□□ -0.51
NR1I3-218ENST00000503547 DCTN1Q14203 1278 aa11.85□□□□□ -0.51
NR1I3-218ENST00000503547 CLEC11AQ9Y240 323 aa11.85□□□□□ -0.51
NR1I3-218ENST00000503547 TRPM7Q96QT4 1865 aa11.85□□□□□ -0.51
NR1I3-218ENST00000503547 OLFM4Q6UX06 510 aa11.84□□□□□ -0.51
NR1I3-218ENST00000503547 RTKN2Q8IZC4 609 aa11.84□□□□□ -0.51
NR1I3-218ENST00000503547 TAF1DQ9H5J8 278 aaPredicted RBP11.84□□□□□ -0.51
NR1I3-218ENST00000503547 ZNF541Q9H0D2 1346 aa11.84□□□□□ -0.51
NR1I3-218ENST00000503547 CNTNAP1P78357 1384 aa11.83□□□□□ -0.52
NR1I3-218ENST00000503547 ADAMTSL1Q8N6G6 1762 aa11.83□□□□□ -0.52
NR1I3-218ENST00000503547 NEFMP07197 916 aa11.83□□□□□ -0.52
NR1I3-218ENST00000503547 NGEFQ8N5V2 710 aa11.83□□□□□ -0.52
NR1I3-218ENST00000503547 AIDAQ96BJ3 306 aa11.83□□□□□ -0.52
NR1I3-218ENST00000503547 L3MBTL3Q96JM7 780 aaPredicted RBP11.83□□□□□ -0.52
NR1I3-218ENST00000503547 HACL1Q9UJ83 578 aa11.83□□□□□ -0.52
NR1I3-218ENST00000503547 NBPF26B4DH59 902 aa11.82□□□□□ -0.52
NR1I3-218ENST00000503547 PPP2R1AP30153 589 aa11.82□□□□□ -0.52
NR1I3-218ENST00000503547 ALDH1B1P30837 517 aa11.82□□□□□ -0.52
NR1I3-218ENST00000503547 NBPF10Q6P3W6 841 aaKnown RBP11.82□□□□□ -0.52
NR1I3-218ENST00000503547 NBPF15Q8N660 670 aa11.82□□□□□ -0.52
NR1I3-218ENST00000503547 C7orf43Q8WVR3 580 aa11.82□□□□□ -0.52
NR1I3-218ENST00000503547 MIS18AQ9NYP9 233 aa11.82□□□□□ -0.52
NR1I3-218ENST00000503547 RNF123Q5XPI4 1314 aa11.82□□□□□ -0.52
NR1I3-218ENST00000503547 TMEM88BA6NKF7 163 aa11.81□□□□□ -0.52
NR1I3-218ENST00000503547 EPHX2P34913 555 aa11.81□□□□□ -0.52
NR1I3-218ENST00000503547 IARSP41252 1262 aaKnown RBP11.81□□□□□ -0.52
NR1I3-218ENST00000503547 TAF7Q15545 349 aaPredicted RBP11.81□□□□□ -0.52
NR1I3-218ENST00000503547 HLFQ16534 295 aa11.81□□□□□ -0.52
NR1I3-218ENST00000503547 KIF6Q6ZMV9 814 aa11.81□□□□□ -0.52
NR1I3-218ENST00000503547 SYNE4Q8N205 404 aa11.81□□□□□ -0.52
NR1I3-218ENST00000503547 NYXQ9GZU5 481 aa11.81□□□□□ -0.52
NR1I3-218ENST00000503547 PASKQ96RG2 1323 aa11.81□□□□□ -0.52
NR1I3-218ENST00000503547 ABCC12Q96J65 1359 aa11.8□□□□□ -0.52
NR1I3-218ENST00000503547 ANKRD36CQ5JPF3 1778 aa11.8□□□□□ -0.52
NR1I3-218ENST00000503547 KLRG2A4D1S0 409 aaPredicted RBP11.8□□□□□ -0.52
NR1I3-218ENST00000503547 RGL2O15211 777 aa11.8□□□□□ -0.52
NR1I3-218ENST00000503547 FOXN1O15353 648 aa11.8□□□□□ -0.52
NR1I3-218ENST00000503547 HTATSF1O43719 755 aaKnown RBP11.8□□□□□ -0.52
NR1I3-218ENST00000503547 NUTM1Q86Y26 1132 aa11.8□□□□□ -0.52
NR1I3-218ENST00000503547 JDP2Q8WYK2 163 aa11.8□□□□□ -0.52
NR1I3-218ENST00000503547 RPGRQ92834 1020 aaKnown RBP11.8□□□□□ -0.52
NR1I3-218ENST00000503547 GJA3Q9Y6H8 435 aa11.8□□□□□ -0.52
NR1I3-218ENST00000503547 LAMB2P55268 1798 aa11.79□□□□□ -0.52
NR1I3-218ENST00000503547 MYL6BP14649 208 aa11.79□□□□□ -0.52
NR1I3-218ENST00000503547 VEGFBP49765 207 aa11.79□□□□□ -0.52
NR1I3-218ENST00000503547 EIF6P56537 245 aaKnown RBP11.79□□□□□ -0.52
NR1I3-218ENST00000503547 MAP1SQ66K74 1059 aaPredicted RBP11.79□□□□□ -0.52
NR1I3-218ENST00000503547 PNMA8AQ86V59 439 aaPredicted RBP11.79□□□□□ -0.52
NR1I3-218ENST00000503547 GPC2Q8N158 579 aa11.79□□□□□ -0.52
NR1I3-218ENST00000503547 RRP7AQ9Y3A4 280 aaKnown RBP11.79□□□□□ -0.52
NR1I3-218ENST00000503547 LTBP1Q14766 1721 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms