RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 SPATA31A6Q5VVP1 1343 aa9.17□□□□□ -0.94
CPNE4-202ENST00000502818 IGKV5-2P06315 115 aa9.17□□□□□ -0.94
CPNE4-202ENST00000502818 LNPKQ9C0E8 428 aa9.17□□□□□ -0.94
CPNE4-202ENST00000502818 SRCIN1Q9C0H9 1055 aa9.17□□□□□ -0.94
CPNE4-202ENST00000502818 NWD2Q9ULI1 1742 aa9.17□□□□□ -0.94
CPNE4-202ENST00000502818 AFF2P51816 1311 aa9.17□□□□□ -0.94
CPNE4-202ENST00000502818 APBB1O00213 710 aa9.17□□□□□ -0.94
CPNE4-202ENST00000502818 MEX3CQ5U5Q3 659 aaKnown RBP9.17□□□□□ -0.94
CPNE4-202ENST00000502818 ITGB4P16144 1822 aa9.17□□□□□ -0.94
CPNE4-202ENST00000502818 UBR2Q8IWV8 1755 aa9.17□□□□□ -0.94
CPNE4-202ENST00000502818 SMARCA5O60264 1052 aaPredicted RBP9.16□□□□□ -0.94
CPNE4-202ENST00000502818 KCNQ4P56696 695 aa9.16□□□□□ -0.94
CPNE4-202ENST00000502818 NUCB1Q02818 461 aa9.16□□□□□ -0.94
CPNE4-202ENST00000502818 ANKRD45Q5TZF3 282 aa9.16□□□□□ -0.94
CPNE4-202ENST00000502818 C16orf71Q8IYS4 520 aaPredicted RBP9.16□□□□□ -0.94
CPNE4-202ENST00000502818 ANO8Q9HCE9 1232 aaPredicted RBP9.16□□□□□ -0.94
CPNE4-202ENST00000502818 NOP58Q9Y2X3 529 aaKnown RBP9.16□□□□□ -0.94
CPNE4-202ENST00000502818 ATP5J2-PTCD1G3V325 749 aa9.16□□□□□ -0.94
CPNE4-202ENST00000502818 GNAI2P04899 355 aa9.16□□□□□ -0.94
CPNE4-202ENST00000502818 C8orf34Q49A92 452 aa9.16□□□□□ -0.94
CPNE4-202ENST00000502818 OTUD7AQ8TE49 926 aaPredicted RBP9.16□□□□□ -0.94
CPNE4-202ENST00000502818 MYD88Q99836 296 aa9.16□□□□□ -0.94
CPNE4-202ENST00000502818 CACNA1FO60840 1977 aa9.15□□□□□ -0.94
CPNE4-202ENST00000502818 RIC3Q7Z5B4 369 aa9.15□□□□□ -0.94
CPNE4-202ENST00000502818 KAZALD1Q96I82 304 aa9.15□□□□□ -0.94
CPNE4-202ENST00000502818 CDCA7Q9BWT1 371 aaPredicted RBP9.15□□□□□ -0.94
CPNE4-202ENST00000502818 BACH2Q9BYV9 841 aa9.15□□□□□ -0.94
CPNE4-202ENST00000502818 DCTPP1Q9H773 170 aa9.15□□□□□ -0.94
CPNE4-202ENST00000502818 DOT1LQ8TEK3 1739 aa9.15□□□□□ -0.94
CPNE4-202ENST00000502818 PXDNLA1KZ92 1463 aa9.15□□□□□ -0.94
CPNE4-202ENST00000502818 UBTFL1P0CB47 393 aaPredicted RBP9.14□□□□□ -0.95
CPNE4-202ENST00000502818 ANKRD13DQ6ZTN6 518 aa9.14□□□□□ -0.95
CPNE4-202ENST00000502818 CHD1LQ86WJ1 897 aa9.14□□□□□ -0.95
CPNE4-202ENST00000502818 EXOC6BQ9Y2D4 811 aa9.14□□□□□ -0.95
CPNE4-202ENST00000502818 ZNF330Q9Y3S2 320 aaPredicted RBP9.14□□□□□ -0.95
CPNE4-202ENST00000502818 SEC24BO95487 1268 aa9.14□□□□□ -0.95
CPNE4-202ENST00000502818 ATP8B2P98198 1209 aa9.14□□□□□ -0.95
CPNE4-202ENST00000502818 EPHA10Q5JZY3 1008 aa9.14□□□□□ -0.95
CPNE4-202ENST00000502818 SMIM5Q71RC9 77 aa9.14□□□□□ -0.95
CPNE4-202ENST00000502818 RPAP2Q8IXW5 612 aaPredicted RBP9.14□□□□□ -0.95
CPNE4-202ENST00000502818 SUCLG2Q96I99 432 aa9.14□□□□□ -0.95
CPNE4-202ENST00000502818 ZBTB3Q9H5J0 574 aa9.14□□□□□ -0.95
CPNE4-202ENST00000502818 NEURL1BA8MQ27 555 aa9.13□□□□□ -0.95
CPNE4-202ENST00000502818 GNAI3P08754 354 aa9.13□□□□□ -0.95
CPNE4-202ENST00000502818 CYP19A1P11511 503 aaPredicted RBP9.13□□□□□ -0.95
CPNE4-202ENST00000502818 ITPK1Q13572 414 aa9.13□□□□□ -0.95
CPNE4-202ENST00000502818 GJD4Q96KN9 370 aaPredicted RBP9.13□□□□□ -0.95
CPNE4-202ENST00000502818 METTL22Q9BUU2 404 aaPredicted RBP9.13□□□□□ -0.95
CPNE4-202ENST00000502818 CHMP4BQ9H444 224 aaKnown RBP9.13□□□□□ -0.95
CPNE4-202ENST00000502818 RTL5Q5HYW3 569 aaPredicted RBP9.13□□□□□ -0.95
CPNE4-202ENST00000502818 PPP1R42Q7Z4L9 355 aa9.13□□□□□ -0.95
CPNE4-202ENST00000502818 LINS1Q8NG48 757 aa9.13□□□□□ -0.95
CPNE4-202ENST00000502818 ZBTB1Q9Y2K1 713 aa9.13□□□□□ -0.95
CPNE4-202ENST00000502818 GCC1Q96CN9 775 aa9.12□□□□□ -0.95
CPNE4-202ENST00000502818 ZNF219Q9P2Y4 722 aaPredicted RBP9.12□□□□□ -0.95
CPNE4-202ENST00000502818 LAMB4A4D0S4 1761 aa9.12□□□□□ -0.95
CPNE4-202ENST00000502818 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.12□□□□□ -0.95
CPNE4-202ENST00000502818 N4BP2Q86UW6 1770 aaPredicted RBP9.12□□□□□ -0.95
CPNE4-202ENST00000502818 ALDH1L1O75891 902 aa9.11□□□□□ -0.95
CPNE4-202ENST00000502818 DDX58O95786 925 aaKnown RBP9.11□□□□□ -0.95
CPNE4-202ENST00000502818 GCKRQ14397 625 aa9.11□□□□□ -0.95
CPNE4-202ENST00000502818 PLBD2Q8NHP8 589 aa9.11□□□□□ -0.95
CPNE4-202ENST00000502818 CHMP4AQ9BY43 222 aa9.11□□□□□ -0.95
CPNE4-202ENST00000502818 C9orf78Q9NZ63 289 aaPredicted RBP9.11□□□□□ -0.95
CPNE4-202ENST00000502818 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.11□□□□□ -0.95
CPNE4-202ENST00000502818 ATRNO75882 1429 aa9.11□□□□□ -0.95
CPNE4-202ENST00000502818 GRM8O00222 908 aa9.11□□□□□ -0.95
CPNE4-202ENST00000502818 HLFQ16534 295 aa9.11□□□□□ -0.95
CPNE4-202ENST00000502818 TSHZ3Q63HK5 1081 aa9.11□□□□□ -0.95
CPNE4-202ENST00000502818 VSIG10Q8N0Z9 540 aa9.11□□□□□ -0.95
CPNE4-202ENST00000502818 DCBLD2Q96PD2 775 aa9.11□□□□□ -0.95
CPNE4-202ENST00000502818 ARXQ96QS3 562 aa9.11□□□□□ -0.95
CPNE4-202ENST00000502818 BICC1Q9H694 974 aaKnown RBP9.11□□□□□ -0.95
CPNE4-202ENST00000502818 QTRT2Q9H974 415 aaKnown RBP9.11□□□□□ -0.95
CPNE4-202ENST00000502818 PA2G4Q9UQ80 394 aaKnown RBP9.11□□□□□ -0.95
CPNE4-202ENST00000502818 LOC102724428A0A0B4J2F2 783 aa9.1□□□□□ -0.95
CPNE4-202ENST00000502818 SRGAP3O43295 1099 aa9.1□□□□□ -0.95
CPNE4-202ENST00000502818 ATP6V1AP38606 617 aa9.1□□□□□ -0.95
CPNE4-202ENST00000502818 SIK1P57059 783 aa9.1□□□□□ -0.95
CPNE4-202ENST00000502818 POLA2Q14181 598 aa9.1□□□□□ -0.95
CPNE4-202ENST00000502818 FAM161AQ3B820 660 aa9.1□□□□□ -0.95
CPNE4-202ENST00000502818 INTS5Q6P9B9 1019 aaKnown RBP9.1□□□□□ -0.95
CPNE4-202ENST00000502818 PLEKHM2Q8IWE5 1019 aa9.1□□□□□ -0.95
CPNE4-202ENST00000502818 REM2Q8IYK8 340 aaPredicted RBP9.1□□□□□ -0.95
CPNE4-202ENST00000502818 SEPT12Q8IYM1 358 aa9.1□□□□□ -0.95
CPNE4-202ENST00000502818 KLHDC4Q8TBB5 520 aa9.1□□□□□ -0.95
CPNE4-202ENST00000502818 SSH3Q8TE77 659 aa9.1□□□□□ -0.95
CPNE4-202ENST00000502818 UTYO14607 1347 aa9.1□□□□□ -0.95
CPNE4-202ENST00000502818 THSD7AQ9UPZ6 1657 aa9.1□□□□□ -0.95
CPNE4-202ENST00000502818 PALLDQ8WX93 1383 aa9.1□□□□□ -0.95
CPNE4-202ENST00000502818 CASP7P55210 303 aa9.1□□□□□ -0.95
CPNE4-202ENST00000502818 NPM2Q86SE8 214 aaKnown RBP9.1□□□□□ -0.95
CPNE4-202ENST00000502818 SYNE4Q8N205 404 aa9.1□□□□□ -0.95
CPNE4-202ENST00000502818 TBC1D2BQ9UPU7 963 aa9.1□□□□□ -0.95
CPNE4-202ENST00000502818 ERBB4Q15303 1308 aa9.09□□□□□ -0.95
CPNE4-202ENST00000502818 TJP1Q07157 1748 aa9.09□□□□□ -0.95
CPNE4-202ENST00000502818 EP400Q96L91 3159 aa9.09□□□□□ -0.95
CPNE4-202ENST00000502818 UBE3BQ7Z3V4 1068 aa9.09□□□□□ -0.95
CPNE4-202ENST00000502818 ARFGEF2Q9Y6D5 1785 aa9.09□□□□□ -0.96
CPNE4-202ENST00000502818 A0A087WZG4 1122 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms