RNA–Protein interactions for RNA: ENST00000502775.1

LINC00955-201, long intergenic non-protein coding RNA 955, humanhuman

TSL 1 (best)

Gene LINC00955, Length 856 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00955-201ENST00000502775 PHACTR3Q96KR7 559 aa17.14■□□□□ 0.33
LINC00955-201ENST00000502775 SNRPA1P09661 255 aaKnown RBP17.13■□□□□ 0.33
LINC00955-201ENST00000502775 PRELPP51888 382 aa17.13■□□□□ 0.33
LINC00955-201ENST00000502775 ERFEQ4G0M1 354 aa17.13■□□□□ 0.33
LINC00955-201ENST00000502775 CLEC4GQ6UXB4 293 aa17.13■□□□□ 0.33
LINC00955-201ENST00000502775 TAOK3Q9H2K8 898 aa17.13■□□□□ 0.33
LINC00955-201ENST00000502775 RGL2O15211 777 aa17.12■□□□□ 0.33
LINC00955-201ENST00000502775 HTATSF1O43719 755 aaKnown RBP17.12■□□□□ 0.33
LINC00955-201ENST00000502775 HTRA3P83110 453 aa17.12■□□□□ 0.33
LINC00955-201ENST00000502775 MASTLQ96GX5 879 aa17.12■□□□□ 0.33
LINC00955-201ENST00000502775 ZNF219Q9P2Y4 722 aaPredicted RBP17.12■□□□□ 0.33
LINC00955-201ENST00000502775 KCNQ3O43525 872 aa17.11■□□□□ 0.33
LINC00955-201ENST00000502775 NEFMP07197 916 aa17.11■□□□□ 0.33
LINC00955-201ENST00000502775 NBPF5PQ86XG9 351 aaPredicted RBP17.11■□□□□ 0.33
LINC00955-201ENST00000502775 CCDC24Q8N4L8 307 aa17.11■□□□□ 0.33
LINC00955-201ENST00000502775 USP16Q9Y5T5 823 aa17.11■□□□□ 0.33
LINC00955-201ENST00000502775 SLX4Q8IY92 1834 aa17.11■□□□□ 0.33
LINC00955-201ENST00000502775 LAMB4A4D0S4 1761 aa17.1■□□□□ 0.33
LINC00955-201ENST00000502775 SRGNP10124 158 aa17.1■□□□□ 0.33
LINC00955-201ENST00000502775 PPP2R1AP30153 589 aa17.1■□□□□ 0.33
LINC00955-201ENST00000502775 PRPF40BQ6NWY9 871 aaKnown RBP17.1■□□□□ 0.33
LINC00955-201ENST00000502775 MCM10Q7L590 875 aa17.09■□□□□ 0.33
LINC00955-201ENST00000502775 CCDC93Q567U6 631 aa17.08■□□□□ 0.32
LINC00955-201ENST00000502775 NPR1P16066 1061 aa17.07■□□□□ 0.32
LINC00955-201ENST00000502775 PIP4K2AP48426 406 aaPredicted RBP17.07■□□□□ 0.32
LINC00955-201ENST00000502775 TPTE2Q6XPS3 522 aa17.07■□□□□ 0.32
LINC00955-201ENST00000502775 TAF7Q15545 349 aaPredicted RBP17.06■□□□□ 0.32
LINC00955-201ENST00000502775 PNISRQ8TF01 805 aaKnown RBP17.06■□□□□ 0.32
LINC00955-201ENST00000502775 NIP7Q9Y221 180 aaKnown RBP eCLIP17.06■□□□□ 0.32
LINC00955-201ENST00000502775 SCN4AP35499 1836 aa17.05■□□□□ 0.32
LINC00955-201ENST00000502775 PRAMEF22A3QJZ6 481 aa17.05■□□□□ 0.32
LINC00955-201ENST00000502775 IQCA1LA6NCM1 817 aa17.05■□□□□ 0.32
LINC00955-201ENST00000502775 POTECB2RU33 542 aa17.05■□□□□ 0.32
LINC00955-201ENST00000502775 DLG5Q8TDM6 1919 aa17.04■□□□□ 0.32
LINC00955-201ENST00000502775 DCTN1Q14203 1278 aa17.04■□□□□ 0.32
LINC00955-201ENST00000502775 CHADLQ6NUI6 762 aa17.04■□□□□ 0.32
LINC00955-201ENST00000502775 KDM3BQ7LBC6 1761 aa17.04■□□□□ 0.32
LINC00955-201ENST00000502775 KLRG2A4D1S0 409 aaPredicted RBP17.03■□□□□ 0.32
LINC00955-201ENST00000502775 GTF2E1P29083 439 aaPredicted RBP17.03■□□□□ 0.32
LINC00955-201ENST00000502775 FKBP4Q02790 459 aaKnown RBP eCLIP17.03■□□□□ 0.32
LINC00955-201ENST00000502775 NBPF26B4DH59 902 aa17.02■□□□□ 0.32
LINC00955-201ENST00000502775 DDNO94850 711 aaPredicted RBP17.02■□□□□ 0.32
LINC00955-201ENST00000502775 ALDH1B1P30837 517 aa17.02■□□□□ 0.32
LINC00955-201ENST00000502775 NBPF10Q6P3W6 841 aaKnown RBP17.02■□□□□ 0.32
LINC00955-201ENST00000502775 RTKN2Q8IZC4 609 aa17.02■□□□□ 0.32
LINC00955-201ENST00000502775 NBPF15Q8N660 670 aa17.02■□□□□ 0.32
LINC00955-201ENST00000502775 C7orf43Q8WVR3 580 aa17.02■□□□□ 0.32
LINC00955-201ENST00000502775 NYXQ9GZU5 481 aa17.02■□□□□ 0.32
LINC00955-201ENST00000502775 PNNQ9H307 717 aaKnown RBP17.02■□□□□ 0.32
LINC00955-201ENST00000502775 L3MBTL3Q96JM7 780 aaPredicted RBP17.01■□□□□ 0.31
LINC00955-201ENST00000502775 CREBZFQ9NS37 354 aa17.01■□□□□ 0.31
LINC00955-201ENST00000502775 NUP98P52948 1817 aa17■□□□□ 0.31
LINC00955-201ENST00000502775 FAM177BA6PVY3 158 aa17■□□□□ 0.31
LINC00955-201ENST00000502775 ERVV-1B6SEH8 477 aa17■□□□□ 0.31
LINC00955-201ENST00000502775 HSPA1AP0DMV8 641 aaKnown RBP17■□□□□ 0.31
LINC00955-201ENST00000502775 HSPA1BP0DMV9 641 aaKnown RBP17■□□□□ 0.31
LINC00955-201ENST00000502775 KIF6Q6ZMV9 814 aa17■□□□□ 0.31
LINC00955-201ENST00000502775 LDHDQ86WU2 507 aa17■□□□□ 0.31
LINC00955-201ENST00000502775 COL13A1Q5TAT6 717 aaPredicted RBP16.99■□□□□ 0.31
LINC00955-201ENST00000502775 IBTKQ9P2D0 1353 aaPredicted RBP16.99■□□□□ 0.31
LINC00955-201ENST00000502775 MAPK8IP3Q9UPT6 1336 aa16.98■□□□□ 0.31
LINC00955-201ENST00000502775 RIC1Q4ADV7 1423 aa16.98■□□□□ 0.31
LINC00955-201ENST00000502775 HLFQ16534 295 aa16.98■□□□□ 0.31
LINC00955-201ENST00000502775 TNS4Q8IZW8 715 aa16.98■□□□□ 0.31
LINC00955-201ENST00000502775 MAP3K15Q6ZN16 1313 aa16.97■□□□□ 0.31
LINC00955-201ENST00000502775 NFE2L2Q16236 605 aa16.97■□□□□ 0.31
LINC00955-201ENST00000502775 CC2D2BQ6DHV5 1058 aa16.97■□□□□ 0.31
LINC00955-201ENST00000502775 TAF1DQ9H5J8 278 aaPredicted RBP16.97■□□□□ 0.31
LINC00955-201ENST00000502775 ZNF277Q9NRM2 450 aaPredicted RBP16.97■□□□□ 0.31
LINC00955-201ENST00000502775 MIS18AQ9NYP9 233 aa16.97■□□□□ 0.31
LINC00955-201ENST00000502775 ERBB4Q15303 1308 aa16.96■□□□□ 0.31
LINC00955-201ENST00000502775 IARSP41252 1262 aaKnown RBP16.96■□□□□ 0.31
LINC00955-201ENST00000502775 EIF4A1P60842 406 aaKnown RBP16.96■□□□□ 0.31
LINC00955-201ENST00000502775 GRIPAP1Q4V328 841 aa16.96■□□□□ 0.31
LINC00955-201ENST00000502775 NGEFQ8N5V2 710 aa16.96■□□□□ 0.31
LINC00955-201ENST00000502775 HACL1Q9UJ83 578 aa16.96■□□□□ 0.31
LINC00955-201ENST00000502775 ABCC12Q96J65 1359 aa16.95■□□□□ 0.3
LINC00955-201ENST00000502775 POTEIP0CG38 1075 aa16.95■□□□□ 0.3
LINC00955-201ENST00000502775 POTEJP0CG39 1038 aa16.95■□□□□ 0.3
LINC00955-201ENST00000502775 CRY2Q49AN0 593 aa16.95■□□□□ 0.3
LINC00955-201ENST00000502775 SYNE4Q8N205 404 aa16.95■□□□□ 0.3
LINC00955-201ENST00000502775 JDP2Q8WYK2 163 aa16.95■□□□□ 0.3
LINC00955-201ENST00000502775 RPGRQ92834 1020 aaKnown RBP16.95■□□□□ 0.3
LINC00955-201ENST00000502775 PSMD1Q99460 953 aa16.95■□□□□ 0.3
LINC00955-201ENST00000502775 RRP7AQ9Y3A4 280 aaKnown RBP16.95■□□□□ 0.3
LINC00955-201ENST00000502775 ZNF541Q9H0D2 1346 aa16.95■□□□□ 0.3
LINC00955-201ENST00000502775 EAPPQ56P03 285 aaPredicted RBP16.94■□□□□ 0.3
LINC00955-201ENST00000502775 PNMA8AQ86V59 439 aaPredicted RBP16.94■□□□□ 0.3
LINC00955-201ENST00000502775 PLEKHF1Q96S99 279 aa16.94■□□□□ 0.3
LINC00955-201ENST00000502775 CNTNAP1P78357 1384 aa16.93■□□□□ 0.3
LINC00955-201ENST00000502775 FZD9O00144 591 aa16.93■□□□□ 0.3
LINC00955-201ENST00000502775 NUTM1Q86Y26 1132 aa16.93■□□□□ 0.3
LINC00955-201ENST00000502775 MKRN1Q9UHC7 482 aaKnown RBP16.93■□□□□ 0.3
LINC00955-201ENST00000502775 PASKQ96RG2 1323 aa16.93■□□□□ 0.3
LINC00955-201ENST00000502775 ADAMTSL1Q8N6G6 1762 aa16.92■□□□□ 0.3
LINC00955-201ENST00000502775 MYL6BP14649 208 aa16.92■□□□□ 0.3
LINC00955-201ENST00000502775 EPHX2P34913 555 aa16.92■□□□□ 0.3
LINC00955-201ENST00000502775 EIF6P56537 245 aaKnown RBP16.92■□□□□ 0.3
LINC00955-201ENST00000502775 OLFM4Q6UX06 510 aa16.92■□□□□ 0.3
LINC00955-201ENST00000502775 PPP1R42Q7Z4L9 355 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms