RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 PCDHGC3Q9UN70 934 aa9.07□□□□□ -0.96
MED28-202ENST00000499786 RRP7AQ9Y3A4 280 aaKnown RBP9.07□□□□□ -0.96
MED28-202ENST00000499786 PEAK1Q9H792 1746 aa9.07□□□□□ -0.96
MED28-202ENST00000499786 ARHGEF10O15013 1369 aa9.07□□□□□ -0.96
MED28-202ENST00000499786 MST1RQ04912 1400 aa9.06□□□□□ -0.96
MED28-202ENST00000499786 MARF1Q9Y4F3 1742 aaKnown RBP9.06□□□□□ -0.96
MED28-202ENST00000499786 PRKAR2BP31323 418 aa9.06□□□□□ -0.96
MED28-202ENST00000499786 IRX6P78412 446 aaPredicted RBP9.06□□□□□ -0.96
MED28-202ENST00000499786 SLFN5Q08AF3 891 aa9.06□□□□□ -0.96
MED28-202ENST00000499786 PUS10Q3MIT2 529 aaKnown RBP9.06□□□□□ -0.96
MED28-202ENST00000499786 TJAP1Q5JTD0 557 aa9.06□□□□□ -0.96
MED28-202ENST00000499786 WWC1Q8IX03 1113 aa9.06□□□□□ -0.96
MED28-202ENST00000499786 KCNH5Q8NCM2 988 aa9.06□□□□□ -0.96
MED28-202ENST00000499786 PROCA1Q8NCQ7 364 aaPredicted RBP9.06□□□□□ -0.96
MED28-202ENST00000499786 SLC27A5Q9Y2P5 690 aa9.06□□□□□ -0.96
MED28-202ENST00000499786 LTN1O94822 1766 aa9.06□□□□□ -0.96
MED28-202ENST00000499786 TRPM3Q9HCF6 1732 aaPredicted RBP9.05□□□□□ -0.96
MED28-202ENST00000499786 IL13P35225 146 aa9.05□□□□□ -0.96
MED28-202ENST00000499786 GRIPAP1Q4V328 841 aa9.05□□□□□ -0.96
MED28-202ENST00000499786 DUSP27Q5VZP5 1158 aa9.05□□□□□ -0.96
MED28-202ENST00000499786 BLOC1S3Q6QNY0 202 aa9.05□□□□□ -0.96
MED28-202ENST00000499786 POLR3EQ9NVU0 708 aa9.05□□□□□ -0.96
MED28-202ENST00000499786 PPP4R2Q9NY27 417 aa9.05□□□□□ -0.96
MED28-202ENST00000499786 PCDHB3Q9Y5E6 796 aa9.05□□□□□ -0.96
MED28-202ENST00000499786 PCDHB15Q9Y5E8 787 aa9.05□□□□□ -0.96
MED28-202ENST00000499786 MAP3K19Q56UN5 1328 aa9.05□□□□□ -0.96
MED28-202ENST00000499786 RNF123Q5XPI4 1314 aa9.05□□□□□ -0.96
MED28-202ENST00000499786 NPHP3Q7Z494 1330 aa9.05□□□□□ -0.96
MED28-202ENST00000499786 HMOX1P09601 288 aa9.04□□□□□ -0.96
MED28-202ENST00000499786 FDX1P10109 184 aa9.04□□□□□ -0.96
MED28-202ENST00000499786 CANXP27824 592 aaKnown RBP9.04□□□□□ -0.96
MED28-202ENST00000499786 TMPOP42166 694 aaKnown RBP9.04□□□□□ -0.96
MED28-202ENST00000499786 CLK2P49760 499 aaKnown RBP9.04□□□□□ -0.96
MED28-202ENST00000499786 GUCA2AQ02747 115 aa9.04□□□□□ -0.96
MED28-202ENST00000499786 EIF4A2Q14240 407 aaKnown RBP9.04□□□□□ -0.96
MED28-202ENST00000499786 NUTM2GQ5VZR2 741 aa9.04□□□□□ -0.96
MED28-202ENST00000499786 SCUBE3Q8IX30 993 aa9.04□□□□□ -0.96
MED28-202ENST00000499786 THAP11Q96EK4 314 aa9.04□□□□□ -0.96
MED28-202ENST00000499786 PLEKHF1Q96S99 279 aa9.04□□□□□ -0.96
MED28-202ENST00000499786 RGPD1P0DJD0 1748 aa9.04□□□□□ -0.96
MED28-202ENST00000499786 IL16Q14005 1332 aa9.04□□□□□ -0.96
MED28-202ENST00000499786 PHRF1Q9P1Y6 1649 aaKnown RBP9.03□□□□□ -0.96
MED28-202ENST00000499786 FBLN1P23142 703 aa9.03□□□□□ -0.96
MED28-202ENST00000499786 RIPK4P57078 832 aa9.03□□□□□ -0.96
MED28-202ENST00000499786 NFE2L2Q16236 605 aa9.03□□□□□ -0.96
MED28-202ENST00000499786 ORAI2Q96SN7 254 aa9.03□□□□□ -0.96
MED28-202ENST00000499786 MTRQ99707 1265 aa9.03□□□□□ -0.96
MED28-202ENST00000499786 SLIT3O75094 1523 aa9.03□□□□□ -0.96
MED28-202ENST00000499786 NFAT5O94916 1531 aa9.03□□□□□ -0.96
MED28-202ENST00000499786 XIRP1Q702N8 1843 aaKnown RBP9.03□□□□□ -0.96
MED28-202ENST00000499786 ALS2Q96Q42 1657 aa9.02□□□□□ -0.97
MED28-202ENST00000499786 ZBTB7CA1YPR0 619 aa9.02□□□□□ -0.97
MED28-202ENST00000499786 FOXO3O43524 673 aa9.02□□□□□ -0.97
MED28-202ENST00000499786 CT47B1P0C2W7 299 aaPredicted RBP9.02□□□□□ -0.97
MED28-202ENST00000499786 BRICD5Q6PL45 260 aa9.02□□□□□ -0.97
MED28-202ENST00000499786 KRT28Q7Z3Y7 464 aa9.02□□□□□ -0.97
MED28-202ENST00000499786 TNS3Q68CZ2 1445 aa9.02□□□□□ -0.97
MED28-202ENST00000499786 LILRB3O75022 631 aa9.01□□□□□ -0.97
MED28-202ENST00000499786 ITGBL1O95965 494 aaPredicted RBP9.01□□□□□ -0.97
MED28-202ENST00000499786 HOXC9P31274 260 aa9.01□□□□□ -0.97
MED28-202ENST00000499786 XPCQ01831 940 aaPredicted RBP9.01□□□□□ -0.97
MED28-202ENST00000499786 PRPF38BQ5VTL8 546 aaKnown RBP9.01□□□□□ -0.97
MED28-202ENST00000499786 SULT6B1Q6IMI4 303 aa9.01□□□□□ -0.97
MED28-202ENST00000499786 ZNF335Q9H4Z2 1342 aaPredicted RBP9.01□□□□□ -0.97
MED28-202ENST00000499786 MED1Q15648 1581 aaPredicted RBP9□□□□□ -0.97
MED28-202ENST00000499786 NR1I2O75469 434 aa9□□□□□ -0.97
MED28-202ENST00000499786 QPCTQ16769 361 aa9□□□□□ -0.97
MED28-202ENST00000499786 HSP90AB2PQ58FF8 381 aa9□□□□□ -0.97
MED28-202ENST00000499786 PPP2R2DQ66LE6 453 aa9□□□□□ -0.97
MED28-202ENST00000499786 TRMT2AQ8IZ69 625 aaKnown RBP9□□□□□ -0.97
MED28-202ENST00000499786 PCMTD1Q96MG8 357 aaPredicted RBP9□□□□□ -0.97
MED28-202ENST00000499786 USP19O94966 1318 aa9□□□□□ -0.97
MED28-202ENST00000499786 IGSF1Q8N6C5 1336 aa9□□□□□ -0.97
MED28-202ENST00000499786 ABCC6O95255 1503 aa9□□□□□ -0.97
MED28-202ENST00000499786 DLG5Q8TDM6 1919 aa8.99□□□□□ -0.97
MED28-202ENST00000499786 ZPR1O75312 459 aa8.99□□□□□ -0.97
MED28-202ENST00000499786 COPS2P61201 443 aa8.99□□□□□ -0.97
MED28-202ENST00000499786 GAS2L2Q8NHY3 880 aa8.99□□□□□ -0.97
MED28-202ENST00000499786 ZNF516Q92618 1163 aa8.99□□□□□ -0.97
MED28-202ENST00000499786 CCDC136Q96JN2 1154 aa8.99□□□□□ -0.97
MED28-202ENST00000499786 IL21Q9HBE4 155 aa8.99□□□□□ -0.97
MED28-202ENST00000499786 FANCIQ9NVI1 1328 aa8.99□□□□□ -0.97
MED28-202ENST00000499786 PXDNQ92626 1479 aa8.98□□□□□ -0.97
MED28-202ENST00000499786 GNAI1P63096 354 aa8.98□□□□□ -0.97
MED28-202ENST00000499786 RNF19BQ6ZMZ0 732 aa8.98□□□□□ -0.97
MED28-202ENST00000499786 RTF1Q92541 710 aaKnown RBP8.98□□□□□ -0.97
MED28-202ENST00000499786 IP6K1Q92551 441 aa8.98□□□□□ -0.97
MED28-202ENST00000499786 SYMPKQ92797 1274 aaKnown RBP8.98□□□□□ -0.97
MED28-202ENST00000499786 LTV1Q96GA3 475 aaPredicted RBP8.98□□□□□ -0.97
MED28-202ENST00000499786 KDRP35968 1356 aa8.98□□□□□ -0.97
MED28-202ENST00000499786 FAM208AQ9UK61 1670 aaKnown RBP8.97□□□□□ -0.97
MED28-202ENST00000499786 GCP02774 474 aa8.97□□□□□ -0.97
MED28-202ENST00000499786 Q3C1V9 767 aa8.97□□□□□ -0.97
MED28-202ENST00000499786 AEBP1Q8IUX7 1158 aa8.97□□□□□ -0.97
MED28-202ENST00000499786 CABLES1Q8TDN4 633 aa8.97□□□□□ -0.97
MED28-202ENST00000499786 IFT57Q9NWB7 429 aa8.97□□□□□ -0.97
MED28-202ENST00000499786 LAS1LQ9Y4W2 734 aaKnown RBP8.97□□□□□ -0.97
MED28-202ENST00000499786 RTL5Q5HYW3 569 aaPredicted RBP8.96□□□□□ -0.98
MED28-202ENST00000499786 TSR2Q969E8 191 aaKnown RBP8.96□□□□□ -0.98
MED28-202ENST00000499786 PHACTR3Q96KR7 559 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms