RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 ANKIB1Q9P2G1 1089 aa9.65□□□□□ -0.87
HLA-DMB-262ENST00000498020 ADAMTSL3P82987 1691 aa9.64□□□□□ -0.87
HLA-DMB-262ENST00000498020 DHX16O60231 1041 aaKnown RBP9.64□□□□□ -0.87
HLA-DMB-262ENST00000498020 TRAK2O60296 914 aa9.64□□□□□ -0.87
HLA-DMB-262ENST00000498020 CNNM1Q9NRU3 951 aa9.64□□□□□ -0.87
HLA-DMB-262ENST00000498020 CHPF2Q9P2E5 772 aa9.64□□□□□ -0.87
HLA-DMB-262ENST00000498020 RNMTO43148 476 aaKnown RBP9.64□□□□□ -0.87
HLA-DMB-262ENST00000498020 NBPF5PQ86XG9 351 aaPredicted RBP9.64□□□□□ -0.87
HLA-DMB-262ENST00000498020 SIRT2Q8IXJ6 389 aa9.64□□□□□ -0.87
HLA-DMB-262ENST00000498020 IFNL2Q8IZJ0 200 aa9.64□□□□□ -0.87
HLA-DMB-262ENST00000498020 ARHGAP23Q9P227 1491 aa9.64□□□□□ -0.87
HLA-DMB-262ENST00000498020 APPP05067 770 aa9.64□□□□□ -0.87
HLA-DMB-262ENST00000498020 PRIM1P49642 420 aaKnown RBP9.64□□□□□ -0.87
HLA-DMB-262ENST00000498020 NEK4P51957 841 aa9.64□□□□□ -0.87
HLA-DMB-262ENST00000498020 PPP1R42Q7Z4L9 355 aa9.64□□□□□ -0.87
HLA-DMB-262ENST00000498020 GJA3Q9Y6H8 435 aa9.64□□□□□ -0.87
HLA-DMB-262ENST00000498020 SLIT1O75093 1534 aa9.63□□□□□ -0.87
HLA-DMB-262ENST00000498020 MSNP26038 577 aaKnown RBP9.63□□□□□ -0.87
HLA-DMB-262ENST00000498020 LARP1Q6PKG0 1096 aaKnown RBP9.63□□□□□ -0.87
HLA-DMB-262ENST00000498020 KDRP35968 1356 aa9.63□□□□□ -0.87
HLA-DMB-262ENST00000498020 ALDH1L1O75891 902 aa9.63□□□□□ -0.87
HLA-DMB-262ENST00000498020 NOL8Q76FK4 1167 aaKnown RBP9.63□□□□□ -0.87
HLA-DMB-262ENST00000498020 AMOTL1Q8IY63 956 aa9.63□□□□□ -0.87
HLA-DMB-262ENST00000498020 SMARCC1Q92922 1105 aaPredicted RBP9.63□□□□□ -0.87
HLA-DMB-262ENST00000498020 DDX49Q9Y6V7 483 aaKnown RBP9.63□□□□□ -0.87
HLA-DMB-262ENST00000498020 EN1Q05925 392 aaPredicted RBP9.63□□□□□ -0.87
HLA-DMB-262ENST00000498020 IKQ13123 557 aaPredicted RBP9.63□□□□□ -0.87
HLA-DMB-262ENST00000498020 DRC7Q8IY82 874 aa9.63□□□□□ -0.87
HLA-DMB-262ENST00000498020 LGR6Q9HBX8 967 aa9.63□□□□□ -0.87
HLA-DMB-262ENST00000498020 EIF4A1P60842 406 aaKnown RBP9.63□□□□□ -0.87
HLA-DMB-262ENST00000498020 EAPPQ56P03 285 aaPredicted RBP9.63□□□□□ -0.87
HLA-DMB-262ENST00000498020 ARHGEF25Q86VW2 580 aa9.63□□□□□ -0.87
HLA-DMB-262ENST00000498020 CCDC34Q96HJ3 373 aa9.63□□□□□ -0.87
HLA-DMB-262ENST00000498020 FAM196AQ6ZSG2 479 aa9.62□□□□□ -0.87
HLA-DMB-262ENST00000498020 PHAXQ9H814 394 aaKnown RBP9.62□□□□□ -0.87
HLA-DMB-262ENST00000498020 ADGRL3Q9HAR2 1447 aa9.62□□□□□ -0.87
HLA-DMB-262ENST00000498020 DIP2AQ14689 1571 aa9.62□□□□□ -0.87
HLA-DMB-262ENST00000498020 GLRX3O76003 335 aaKnown RBP9.62□□□□□ -0.87
HLA-DMB-262ENST00000498020 ZKSCAN1P17029 563 aaPredicted RBP9.62□□□□□ -0.87
HLA-DMB-262ENST00000498020 ZBTB3Q9H5J0 574 aa9.62□□□□□ -0.87
HLA-DMB-262ENST00000498020 MAP3K2Q9Y2U5 619 aa9.62□□□□□ -0.87
HLA-DMB-262ENST00000498020 ANKRD26Q9UPS8 1709 aa9.62□□□□□ -0.87
HLA-DMB-262ENST00000498020 ANXA1P04083 346 aa9.61□□□□□ -0.87
HLA-DMB-262ENST00000498020 ATP2B2Q01814 1243 aa9.61□□□□□ -0.87
HLA-DMB-262ENST00000498020 KSR2Q6VAB6 950 aa9.61□□□□□ -0.87
HLA-DMB-262ENST00000498020 NUTM1Q86Y26 1132 aa9.61□□□□□ -0.87
HLA-DMB-262ENST00000498020 CRB1P82279 1406 aa9.61□□□□□ -0.87
HLA-DMB-262ENST00000498020 HIP1O00291 1037 aa9.61□□□□□ -0.87
HLA-DMB-262ENST00000498020 TRAPPC3LQ5T215 181 aa9.61□□□□□ -0.87
HLA-DMB-262ENST00000498020 RHPN1Q8TCX5 695 aa9.61□□□□□ -0.87
HLA-DMB-262ENST00000498020 C3P01024 1663 aa9.61□□□□□ -0.87
HLA-DMB-262ENST00000498020 MAP2P11137 1827 aaKnown RBP9.61□□□□□ -0.87
HLA-DMB-262ENST00000498020 KCNQ4P56696 695 aa9.61□□□□□ -0.87
HLA-DMB-262ENST00000498020 SETDB2Q96T68 719 aa9.61□□□□□ -0.87
HLA-DMB-262ENST00000498020 TMOD2Q9NZR1 351 aa9.61□□□□□ -0.87
HLA-DMB-262ENST00000498020 ITSN1Q15811 1721 aa9.61□□□□□ -0.87
HLA-DMB-262ENST00000498020 CEP170BQ9Y4F5 1589 aaPredicted RBP9.6□□□□□ -0.87
HLA-DMB-262ENST00000498020 OTUD7AQ8TE49 926 aaPredicted RBP9.6□□□□□ -0.87
HLA-DMB-262ENST00000498020 DEFB132Q7Z7B7 95 aa9.6□□□□□ -0.87
HLA-DMB-262ENST00000498020 RTN4Q9NQC3 1192 aaKnown RBP9.6□□□□□ -0.87
HLA-DMB-262ENST00000498020 TBC1D2BQ9UPU7 963 aa9.6□□□□□ -0.87
HLA-DMB-262ENST00000498020 CCDC24Q8N4L8 307 aa9.6□□□□□ -0.87
HLA-DMB-262ENST00000498020 IL27Q8NEV9 243 aa9.6□□□□□ -0.87
HLA-DMB-262ENST00000498020 SYAP1Q96A49 352 aaPredicted RBP9.6□□□□□ -0.87
HLA-DMB-262ENST00000498020 FMNL2Q96PY5 1086 aa9.6□□□□□ -0.87
HLA-DMB-262ENST00000498020 GSPT1P15170 499 aaKnown RBP9.6□□□□□ -0.87
HLA-DMB-262ENST00000498020 RNF20Q5VTR2 975 aa9.6□□□□□ -0.87
HLA-DMB-262ENST00000498020 LINS1Q8NG48 757 aa9.6□□□□□ -0.87
HLA-DMB-262ENST00000498020 USP26Q9BXU7 913 aa9.6□□□□□ -0.87
HLA-DMB-262ENST00000498020 TRMT112Q9UI30 125 aaKnown RBP9.6□□□□□ -0.87
HLA-DMB-262ENST00000498020 UBR1Q8IWV7 1749 aa9.59□□□□□ -0.87
HLA-DMB-262ENST00000498020 LMOD1P29536 600 aaPredicted RBP9.59□□□□□ -0.87
HLA-DMB-262ENST00000498020 ST5P78524 1137 aa9.59□□□□□ -0.87
HLA-DMB-262ENST00000498020 SLC39A6Q13433 755 aa9.59□□□□□ -0.87
HLA-DMB-262ENST00000498020 SNRPA1P09661 255 aaKnown RBP9.59□□□□□ -0.87
HLA-DMB-262ENST00000498020 AACSQ86V21 672 aa9.59□□□□□ -0.87
HLA-DMB-262ENST00000498020 USP44Q9H0E7 712 aa9.59□□□□□ -0.87
HLA-DMB-262ENST00000498020 DDX21Q9NR30 783 aaKnown RBP eCLIP9.59□□□□□ -0.87
HLA-DMB-262ENST00000498020 SSH2Q76I76 1423 aa9.59□□□□□ -0.88
HLA-DMB-262ENST00000498020 PNMA6EA0A0J9YXQ4 647 aa9.58□□□□□ -0.88
HLA-DMB-262ENST00000498020 ESYT1Q9BSJ8 1104 aa9.58□□□□□ -0.88
HLA-DMB-262ENST00000498020 IBSPP21815 317 aaPredicted RBP9.58□□□□□ -0.88
HLA-DMB-262ENST00000498020 MRE11P49959 708 aa9.58□□□□□ -0.88
HLA-DMB-262ENST00000498020 CHMP4BP1P59074 171 aa9.58□□□□□ -0.88
HLA-DMB-262ENST00000498020 KIAA2012Q0VF49 1180 aa9.58□□□□□ -0.88
HLA-DMB-262ENST00000498020 TSHZ3Q63HK5 1081 aa9.58□□□□□ -0.88
HLA-DMB-262ENST00000498020 TNPO1Q92973 898 aaKnown RBP9.58□□□□□ -0.88
HLA-DMB-262ENST00000498020 ATP6V1DQ9Y5K8 247 aa9.58□□□□□ -0.88
HLA-DMB-262ENST00000498020 KNDC1Q76NI1 1749 aa9.58□□□□□ -0.88
HLA-DMB-262ENST00000498020 PIP4K2AP48426 406 aaPredicted RBP9.58□□□□□ -0.88
HLA-DMB-262ENST00000498020 MCTP1Q6DN14 999 aa9.58□□□□□ -0.88
HLA-DMB-262ENST00000498020 BRINP3Q76B58 766 aa9.58□□□□□ -0.88
HLA-DMB-262ENST00000498020 UNC5CLQ8IV45 518 aa9.58□□□□□ -0.88
HLA-DMB-262ENST00000498020 OSBPL3Q9H4L5 887 aa9.58□□□□□ -0.88
HLA-DMB-262ENST00000498020 SPON1Q9HCB6 807 aa9.58□□□□□ -0.88
HLA-DMB-262ENST00000498020 BIN2Q9UBW5 565 aaPredicted RBP9.58□□□□□ -0.88
HLA-DMB-262ENST00000498020 AOX1Q06278 1338 aa9.57□□□□□ -0.88
HLA-DMB-262ENST00000498020 NRXN3Q9Y4C0 1643 aa9.57□□□□□ -0.88
HLA-DMB-262ENST00000498020 GRM8O00222 908 aa9.57□□□□□ -0.88
HLA-DMB-262ENST00000498020 MAP4K4O95819 1239 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms