RNA–Protein interactions for RNA: ENST00000497850.5

NXF3-207, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 2,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-207ENST00000497850 OS9Q13438 667 aaPredicted RBP15.64■□□□□ 0.09
NXF3-207ENST00000497850 BBXQ8WY36 941 aaPredicted RBP15.64■□□□□ 0.09
NXF3-207ENST00000497850 MCCP23508 829 aa15.63■□□□□ 0.09
NXF3-207ENST00000497850 PI4K2BQ8TCG2 481 aa15.63■□□□□ 0.09
NXF3-207ENST00000497850 PA2G4Q9UQ80 394 aaKnown RBP15.63■□□□□ 0.09
NXF3-207ENST00000497850 ZNF142P52746 1687 aaPredicted RBP15.63■□□□□ 0.09
NXF3-207ENST00000497850 NPHP4O75161 1426 aaPredicted RBP15.63■□□□□ 0.09
NXF3-207ENST00000497850 KRT28Q7Z3Y7 464 aa15.63■□□□□ 0.09
NXF3-207ENST00000497850 JARID2Q92833 1246 aaPredicted RBP15.62■□□□□ 0.09
NXF3-207ENST00000497850 RAB11FIP3O75154 756 aa15.61■□□□□ 0.09
NXF3-207ENST00000497850 PRPF40AO75400 957 aaKnown RBP15.61■□□□□ 0.09
NXF3-207ENST00000497850 SLC39A6Q13433 755 aa15.61■□□□□ 0.09
NXF3-207ENST00000497850 PROSER2Q86WR7 435 aaPredicted RBP15.61■□□□□ 0.09
NXF3-207ENST00000497850 CWC22Q9HCG8 908 aaKnown RBP15.61■□□□□ 0.09
NXF3-207ENST00000497850 C9orf78Q9NZ63 289 aaPredicted RBP15.61■□□□□ 0.09
NXF3-207ENST00000497850 GIGYF1O75420 1035 aaPredicted RBP15.61■□□□□ 0.09
NXF3-207ENST00000497850 FOXD4L6Q3SYB3 417 aaPredicted RBP15.61■□□□□ 0.09
NXF3-207ENST00000497850 AMOTQ4VCS5 1084 aa15.61■□□□□ 0.09
NXF3-207ENST00000497850 FOXD4L3Q6VB84 417 aaPredicted RBP15.61■□□□□ 0.09
NXF3-207ENST00000497850 KIF1BPQ96EK5 621 aa15.61■□□□□ 0.09
NXF3-207ENST00000497850 LARP6Q9BRS8 491 aaKnown RBP15.61■□□□□ 0.09
NXF3-207ENST00000497850 RBM27Q9P2N5 1060 aaKnown RBP15.61■□□□□ 0.09
NXF3-207ENST00000497850 DBF4Q9UBU7 674 aaPredicted RBP15.61■□□□□ 0.09
NXF3-207ENST00000497850 LETM1O95202 739 aaPredicted RBP15.6■□□□□ 0.09
NXF3-207ENST00000497850 HOXB7P09629 217 aa15.6■□□□□ 0.09
NXF3-207ENST00000497850 GPT2Q8TD30 523 aa15.6■□□□□ 0.09
NXF3-207ENST00000497850 GTF2F1P35269 517 aaKnown RBP eCLIP15.6■□□□□ 0.09
NXF3-207ENST00000497850 CBX1P83916 185 aa15.6■□□□□ 0.09
NXF3-207ENST00000497850 KIAA2012Q0VF49 1180 aa15.59■□□□□ 0.09
NXF3-207ENST00000497850 ATP2B3Q16720 1220 aa15.59■□□□□ 0.09
NXF3-207ENST00000497850 LRSAM1Q6UWE0 723 aa15.59■□□□□ 0.09
NXF3-207ENST00000497850 CWC27Q6UX04 472 aaKnown RBP15.59■□□□□ 0.09
NXF3-207ENST00000497850 TSC1Q92574 1164 aa15.59■□□□□ 0.09
NXF3-207ENST00000497850 SPG7Q9UQ90 795 aa15.59■□□□□ 0.09
NXF3-207ENST00000497850 PHRF1Q9P1Y6 1649 aaKnown RBP15.58■□□□□ 0.09
NXF3-207ENST00000497850 DTNBO60941 627 aa15.58■□□□□ 0.08
NXF3-207ENST00000497850 PIP4K2AP48426 406 aaPredicted RBP15.58■□□□□ 0.08
NXF3-207ENST00000497850 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.58■□□□□ 0.08
NXF3-207ENST00000497850 AOX1Q06278 1338 aa15.58■□□□□ 0.08
NXF3-207ENST00000497850 SLIT3O75094 1523 aa15.58■□□□□ 0.08
NXF3-207ENST00000497850 MYL6BP14649 208 aa15.57■□□□□ 0.08
NXF3-207ENST00000497850 PRIMPOLQ96LW4 560 aa15.57■□□□□ 0.08
NXF3-207ENST00000497850 NLRP2Q9NX02 1062 aa15.57■□□□□ 0.08
NXF3-207ENST00000497850 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.57■□□□□ 0.08
NXF3-207ENST00000497850 KSR2Q6VAB6 950 aa15.57■□□□□ 0.08
NXF3-207ENST00000497850 CABLES1Q8TDN4 633 aa15.57■□□□□ 0.08
NXF3-207ENST00000497850 NSFL1CQ9UNZ2 370 aaKnown RBP15.57■□□□□ 0.08
NXF3-207ENST00000497850 CNTROBQ8N137 903 aa15.56■□□□□ 0.08
NXF3-207ENST00000497850 TMEM63CQ9P1W3 806 aa15.56■□□□□ 0.08
NXF3-207ENST00000497850 TRPM3Q9HCF6 1732 aaPredicted RBP15.56■□□□□ 0.08
NXF3-207ENST00000497850 SGSM2O43147 1006 aa15.56■□□□□ 0.08
NXF3-207ENST00000497850 CPA1P15085 419 aa15.56■□□□□ 0.08
NXF3-207ENST00000497850 HMGN5P82970 282 aaKnown RBP15.56■□□□□ 0.08
NXF3-207ENST00000497850 SUCLG2Q96I99 432 aa15.56■□□□□ 0.08
NXF3-207ENST00000497850 SYCE3A1L190 88 aa15.55■□□□□ 0.08
NXF3-207ENST00000497850 HSPA4P34932 840 aa15.55■□□□□ 0.08
NXF3-207ENST00000497850 ANAPC15P60006 121 aa15.55■□□□□ 0.08
NXF3-207ENST00000497850 RASEFQ8IZ41 740 aa15.55■□□□□ 0.08
NXF3-207ENST00000497850 SIL1Q9H173 461 aa15.55■□□□□ 0.08
NXF3-207ENST00000497850 ERBB3P21860 1342 aa15.55■□□□□ 0.08
NXF3-207ENST00000497850 TPRNQ4KMQ1 711 aa15.55■□□□□ 0.08
NXF3-207ENST00000497850 KLHDC4Q8TBB5 520 aa15.55■□□□□ 0.08
NXF3-207ENST00000497850 ADAMTSL3P82987 1691 aa15.55■□□□□ 0.08
NXF3-207ENST00000497850 SIPA1L3O60292 1781 aaPredicted RBP15.54■□□□□ 0.08
NXF3-207ENST00000497850 CUL4AQ13619 759 aa15.54■□□□□ 0.08
NXF3-207ENST00000497850 CHRNA2Q15822 529 aa15.54■□□□□ 0.08
NXF3-207ENST00000497850 CLASRPQ8N2M8 674 aaKnown RBP15.54■□□□□ 0.08
NXF3-207ENST00000497850 DDX54Q8TDD1 881 aaKnown RBP15.54■□□□□ 0.08
NXF3-207ENST00000497850 LSG1Q9H089 658 aaKnown RBP15.54■□□□□ 0.08
NXF3-207ENST00000497850 BICC1Q9H694 974 aaKnown RBP15.54■□□□□ 0.08
NXF3-207ENST00000497850 SNX14Q9Y5W7 946 aa15.54■□□□□ 0.08
NXF3-207ENST00000497850 NCAPD2Q15021 1401 aa15.54■□□□□ 0.08
NXF3-207ENST00000497850 C1orf167Q5SNV9 1468 aa15.54■□□□□ 0.08
NXF3-207ENST00000497850 MCM2P49736 904 aa15.54■□□□□ 0.08
NXF3-207ENST00000497850 AACSQ86V21 672 aa15.54■□□□□ 0.08
NXF3-207ENST00000497850 NFATC2IPQ8NCF5 419 aa15.54■□□□□ 0.08
NXF3-207ENST00000497850 KAZALD1Q96I82 304 aa15.54■□□□□ 0.08
NXF3-207ENST00000497850 TMEM51Q9NW97 253 aa15.54■□□□□ 0.08
NXF3-207ENST00000497850 RAD50Q92878 1312 aa15.53■□□□□ 0.08
NXF3-207ENST00000497850 IFIT2P09913 472 aaKnown RBP15.53■□□□□ 0.08
NXF3-207ENST00000497850 PDIA6Q15084 440 aa15.53■□□□□ 0.08
NXF3-207ENST00000497850 HSP90AB4PQ58FF6 505 aa15.53■□□□□ 0.08
NXF3-207ENST00000497850 RAPGEF4Q8WZA2 1011 aa15.53■□□□□ 0.08
NXF3-207ENST00000497850 CCDC8Q9H0W5 538 aaPredicted RBP15.53■□□□□ 0.08
NXF3-207ENST00000497850 GDPD2Q9HCC8 539 aa15.53■□□□□ 0.08
NXF3-207ENST00000497850 C5P01031 1676 aa15.53■□□□□ 0.08
NXF3-207ENST00000497850 HEG1Q9ULI3 1381 aa15.53■□□□□ 0.08
NXF3-207ENST00000497850 GRM8O00222 908 aa15.52■□□□□ 0.08
NXF3-207ENST00000497850 ALDH1L1O75891 902 aa15.52■□□□□ 0.08
NXF3-207ENST00000497850 CSB-PGBD3P0DP91 1061 aa15.52■□□□□ 0.08
NXF3-207ENST00000497850 RIC3Q7Z5B4 369 aa15.52■□□□□ 0.08
NXF3-207ENST00000497850 DIAPH3Q9NSV4 1193 aa15.52■□□□□ 0.08
NXF3-207ENST00000497850 HYPKQ9NX55 129 aa15.52■□□□□ 0.08
NXF3-207ENST00000497850 BRD1O95696 1058 aa15.52■□□□□ 0.07
NXF3-207ENST00000497850 PTH1RQ03431 593 aa15.52■□□□□ 0.07
NXF3-207ENST00000497850 DNTTIP2Q5QJE6 756 aaKnown RBP15.52■□□□□ 0.07
NXF3-207ENST00000497850 ZNF790Q6PG37 636 aa15.52■□□□□ 0.07
NXF3-207ENST00000497850 PIBF1Q8WXW3 757 aa15.52■□□□□ 0.07
NXF3-207ENST00000497850 CHMP4AQ9BY43 222 aa15.52■□□□□ 0.07
NXF3-207ENST00000497850 TLR7Q9NYK1 1049 aaKnown RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms