RNA–Protein interactions for RNA: ENST00000497726.5

CCDC58-206, Transcript of coiled-coil domain containing 58, humanhuman

TSL 5 BASIC

Gene CCDC58, Length 438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-206ENST00000497726 NKX1-1Q15270 411 aaPredicted RBP13.19□□□□□ -0.3
CCDC58-206ENST00000497726 NBPF15Q8N660 670 aa13.19□□□□□ -0.3
CCDC58-206ENST00000497726 L3MBTL3Q96JM7 780 aaPredicted RBP13.19□□□□□ -0.3
CCDC58-206ENST00000497726 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCDC58-206ENST00000497726 NPC1L1Q9UHC9 1359 aa13.19□□□□□ -0.3
CCDC58-206ENST00000497726 A0A0C4DFX4 3053 aa13.19□□□□□ -0.3
CCDC58-206ENST00000497726 C21orf2O43822 256 aa13.18□□□□□ -0.3
CCDC58-206ENST00000497726 MAP2K2P36507 400 aa13.18□□□□□ -0.3
CCDC58-206ENST00000497726 C2CD5Q86YS7 1000 aa13.18□□□□□ -0.3
CCDC58-206ENST00000497726 KDRP35968 1356 aa13.18□□□□□ -0.3
CCDC58-206ENST00000497726 DICER1Q9UPY3 1922 aaKnown RBP13.17□□□□□ -0.3
CCDC58-206ENST00000497726 CNTNAP4Q9C0A0 1308 aa13.17□□□□□ -0.3
CCDC58-206ENST00000497726 USP42Q9H9J4 1324 aaKnown RBP13.17□□□□□ -0.3
CCDC58-206ENST00000497726 EPHX2P34913 555 aa13.17□□□□□ -0.3
CCDC58-206ENST00000497726 AMOTQ4VCS5 1084 aa13.17□□□□□ -0.3
CCDC58-206ENST00000497726 HSP90AB1P08238 724 aaKnown RBP13.16□□□□□ -0.3
CCDC58-206ENST00000497726 CABP4P57796 275 aa13.16□□□□□ -0.3
CCDC58-206ENST00000497726 SP7Q8TDD2 431 aaPredicted RBP13.16□□□□□ -0.3
CCDC58-206ENST00000497726 HACL1Q9UJ83 578 aa13.16□□□□□ -0.3
CCDC58-206ENST00000497726 ADAMTSL1Q8N6G6 1762 aa13.16□□□□□ -0.3
CCDC58-206ENST00000497726 SCN4AP35499 1836 aa13.16□□□□□ -0.3
CCDC58-206ENST00000497726 SZT2Q5T011 3432 aa13.15□□□□□ -0.3
CCDC58-206ENST00000497726 CST9Q5W186 159 aa13.15□□□□□ -0.3
CCDC58-206ENST00000497726 CFAP53Q96M91 514 aa13.15□□□□□ -0.3
CCDC58-206ENST00000497726 H0YIN7 160 aa13.14□□□□□ -0.31
CCDC58-206ENST00000497726 CIAPIN1Q6FI81 312 aa13.14□□□□□ -0.31
CCDC58-206ENST00000497726 TAOK3Q9H2K8 898 aa13.14□□□□□ -0.31
CCDC58-206ENST00000497726 TLL2Q9Y6L7 1015 aa13.14□□□□□ -0.31
CCDC58-206ENST00000497726 MYH14Q7Z406 1995 aaKnown RBP13.14□□□□□ -0.31
CCDC58-206ENST00000497726 COL5A3P25940 1745 aaPredicted RBP13.13□□□□□ -0.31
CCDC58-206ENST00000497726 DLEC1Q9Y238 1755 aa13.13□□□□□ -0.31
CCDC58-206ENST00000497726 PPP2R1AP30153 589 aa13.13□□□□□ -0.31
CCDC58-206ENST00000497726 BRPF1P55201 1214 aaPredicted RBP13.13□□□□□ -0.31
CCDC58-206ENST00000497726 PNMA8AQ86V59 439 aaPredicted RBP13.13□□□□□ -0.31
CCDC58-206ENST00000497726 MKI67P46013 3256 aaKnown RBP13.13□□□□□ -0.31
CCDC58-206ENST00000497726 TJP1Q07157 1748 aa13.13□□□□□ -0.31
CCDC58-206ENST00000497726 RNF123Q5XPI4 1314 aa13.13□□□□□ -0.31
CCDC58-206ENST00000497726 ZNF541Q9H0D2 1346 aa13.13□□□□□ -0.31
CCDC58-206ENST00000497726 CARMIL3Q8ND23 1372 aa13.12□□□□□ -0.31
CCDC58-206ENST00000497726 ERVV-2B6SEH9 535 aa13.12□□□□□ -0.31
CCDC58-206ENST00000497726 TRAF5O00463 557 aa13.12□□□□□ -0.31
CCDC58-206ENST00000497726 PTCD1O75127 700 aaKnown RBP13.12□□□□□ -0.31
CCDC58-206ENST00000497726 MTHFSDQ2M296 383 aaKnown RBP13.12□□□□□ -0.31
CCDC58-206ENST00000497726 SLC17A8Q8NDX2 589 aa13.12□□□□□ -0.31
CCDC58-206ENST00000497726 ZNF622Q969S3 477 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCDC58-206ENST00000497726 FER1L6Q2WGJ9 1857 aa13.12□□□□□ -0.31
CCDC58-206ENST00000497726 LTBP3Q9NS15 1303 aa13.12□□□□□ -0.31
CCDC58-206ENST00000497726 CRKLP46109 303 aaKnown RBP13.11□□□□□ -0.31
CCDC58-206ENST00000497726 NFIXQ14938 502 aa13.11□□□□□ -0.31
CCDC58-206ENST00000497726 AKAP4Q5JQC9 854 aa13.11□□□□□ -0.31
CCDC58-206ENST00000497726 USPL1Q5W0Q7 1092 aa13.11□□□□□ -0.31
CCDC58-206ENST00000497726 NFATC2IPQ8NCF5 419 aa13.11□□□□□ -0.31
CCDC58-206ENST00000497726 ZIC5Q96T25 663 aa13.11□□□□□ -0.31
CCDC58-206ENST00000497726 LGR6Q9HBX8 967 aa13.11□□□□□ -0.31
CCDC58-206ENST00000497726 CUL9Q8IWT3 2517 aa13.11□□□□□ -0.31
CCDC58-206ENST00000497726 MRC1P22897 1456 aa13.1□□□□□ -0.31
CCDC58-206ENST00000497726 SERPINB2P05120 415 aa13.1□□□□□ -0.31
CCDC58-206ENST00000497726 U2AF1L5P0DN76 240 aaPredicted RBP13.1□□□□□ -0.31
CCDC58-206ENST00000497726 PRKAR2BP31323 418 aa13.1□□□□□ -0.31
CCDC58-206ENST00000497726 U2AF1Q01081 240 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCDC58-206ENST00000497726 DDX10Q13206 875 aaKnown RBP13.1□□□□□ -0.31
CCDC58-206ENST00000497726 AFDNP55196 1824 aaKnown RBP13.09□□□□□ -0.31
CCDC58-206ENST00000497726 RNMTO43148 476 aaKnown RBP13.09□□□□□ -0.31
CCDC58-206ENST00000497726 SLC39A6Q13433 755 aa13.09□□□□□ -0.31
CCDC58-206ENST00000497726 ADAMTS7Q9UKP4 1686 aa13.08□□□□□ -0.31
CCDC58-206ENST00000497726 SAPCD2Q86UD0 394 aa13.08□□□□□ -0.32
CCDC58-206ENST00000497726 HPS5Q9UPZ3 1129 aa13.08□□□□□ -0.32
CCDC58-206ENST00000497726 NUDCQ9Y266 331 aa13.08□□□□□ -0.32
CCDC58-206ENST00000497726 ZNF831Q5JPB2 1677 aa13.08□□□□□ -0.32
CCDC58-206ENST00000497726 ZPR1O75312 459 aa13.07□□□□□ -0.32
CCDC58-206ENST00000497726 RSPH6AQ9H0K4 717 aa13.07□□□□□ -0.32
CCDC58-206ENST00000497726 SLC52A2Q9HAB3 445 aa13.07□□□□□ -0.32
CCDC58-206ENST00000497726 SIPA1L3O60292 1781 aaPredicted RBP13.07□□□□□ -0.32
CCDC58-206ENST00000497726 GAS2L2Q8NHY3 880 aa13.06□□□□□ -0.32
CCDC58-206ENST00000497726 PHACTR3Q96KR7 559 aa13.06□□□□□ -0.32
CCDC58-206ENST00000497726 UBR2Q8IWV8 1755 aa13.06□□□□□ -0.32
CCDC58-206ENST00000497726 DLG5Q8TDM6 1919 aa13.05□□□□□ -0.32
CCDC58-206ENST00000497726 NRXN2Q9P2S2 1712 aa13.05□□□□□ -0.32
CCDC58-206ENST00000497726 INTS5Q6P9B9 1019 aaKnown RBP13.05□□□□□ -0.32
CCDC58-206ENST00000497726 BICDL1Q6ZP65 573 aa13.05□□□□□ -0.32
CCDC58-206ENST00000497726 CCDC24Q8N4L8 307 aa13.05□□□□□ -0.32
CCDC58-206ENST00000497726 GNAT3A8MTJ3 354 aa13.04□□□□□ -0.32
CCDC58-206ENST00000497726 TEFQ10587 303 aa13.04□□□□□ -0.32
CCDC58-206ENST00000497726 CTU1Q7Z7A3 348 aaKnown RBP13.04□□□□□ -0.32
CCDC58-206ENST00000497726 DNAJC10Q8IXB1 793 aa13.04□□□□□ -0.32
CCDC58-206ENST00000497726 COL6A3P12111 3177 aa13.03□□□□□ -0.32
CCDC58-206ENST00000497726 CELF2O95319 508 aaKnown RBP13.03□□□□□ -0.32
CCDC58-206ENST00000497726 BCL2L12Q9HB09 334 aa13.03□□□□□ -0.32
CCDC58-206ENST00000497726 ZNF277Q9NRM2 450 aaPredicted RBP13.03□□□□□ -0.32
CCDC58-206ENST00000497726 TRPM7Q96QT4 1865 aa13.02□□□□□ -0.32
CCDC58-206ENST00000497726 MCM10Q7L590 875 aa13.02□□□□□ -0.33
CCDC58-206ENST00000497726 TTC5Q8N0Z6 440 aa13.02□□□□□ -0.33
CCDC58-206ENST00000497726 EPS15P42566 896 aa13.01□□□□□ -0.33
CCDC58-206ENST00000497726 DCTN1Q14203 1278 aa13.01□□□□□ -0.33
CCDC58-206ENST00000497726 PRPF40BQ6NWY9 871 aaKnown RBP13.01□□□□□ -0.33
CCDC58-206ENST00000497726 IL17REQ8NFR9 667 aa13.01□□□□□ -0.33
CCDC58-206ENST00000497726 HHIPL1Q96JK4 782 aa13.01□□□□□ -0.33
CCDC58-206ENST00000497726 COLQQ9Y215 455 aaPredicted RBP13.01□□□□□ -0.33
CCDC58-206ENST00000497726 SLX4Q8IY92 1834 aa13.01□□□□□ -0.33
CCDC58-206ENST00000497726 TRPA1O75762 1119 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms