RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 RGL2O15211 777 aa20.9■□□□□ 0.94
FAM3A-220ENST00000497506 COPS6Q7L5N1 327 aa20.9■□□□□ 0.94
FAM3A-220ENST00000497506 XAGE3Q8WTP9 111 aa20.9■□□□□ 0.94
FAM3A-220ENST00000497506 HYPKQ9NX55 129 aa20.9■□□□□ 0.94
FAM3A-220ENST00000497506 MAP3K15Q6ZN16 1313 aa20.89■□□□□ 0.93
FAM3A-220ENST00000497506 ERVV-1B6SEH8 477 aa20.89■□□□□ 0.93
FAM3A-220ENST00000497506 DDR1Q08345 913 aa20.89■□□□□ 0.93
FAM3A-220ENST00000497506 NFIXQ14938 502 aa20.89■□□□□ 0.93
FAM3A-220ENST00000497506 HLFQ16534 295 aa20.89■□□□□ 0.93
FAM3A-220ENST00000497506 CLEC4GQ6UXB4 293 aa20.89■□□□□ 0.93
FAM3A-220ENST00000497506 PPP1R1BQ9UD71 204 aaPredicted RBP20.89■□□□□ 0.93
FAM3A-220ENST00000497506 ZBED9Q6R2W3 1325 aa20.88■□□□□ 0.93
FAM3A-220ENST00000497506 TCERG1O14776 1098 aaKnown RBP20.88■□□□□ 0.93
FAM3A-220ENST00000497506 TBC1D9BQ66K14 1250 aa20.88■□□□□ 0.93
FAM3A-220ENST00000497506 KIF6Q6ZMV9 814 aa20.88■□□□□ 0.93
FAM3A-220ENST00000497506 CACNA1FO60840 1977 aa20.87■□□□□ 0.93
FAM3A-220ENST00000497506 POLRMTO00411 1230 aaKnown RBP20.87■□□□□ 0.93
FAM3A-220ENST00000497506 AIMP1Q12904 312 aaKnown RBP20.87■□□□□ 0.93
FAM3A-220ENST00000497506 ZBTB3Q9H5J0 574 aa20.87■□□□□ 0.93
FAM3A-220ENST00000497506 PHAXQ9H814 394 aaKnown RBP20.87■□□□□ 0.93
FAM3A-220ENST00000497506 PARP3Q9Y6F1 533 aa20.87■□□□□ 0.93
FAM3A-220ENST00000497506 AFDNP55196 1824 aaKnown RBP20.87■□□□□ 0.93
FAM3A-220ENST00000497506 BICDL1Q6ZP65 573 aa20.86■□□□□ 0.93
FAM3A-220ENST00000497506 ZNF652Q9Y2D9 606 aa20.86■□□□□ 0.93
FAM3A-220ENST00000497506 NRXN2Q9P2S2 1712 aa20.85■□□□□ 0.93
FAM3A-220ENST00000497506 STK31Q9BXU1 1019 aa20.85■□□□□ 0.93
FAM3A-220ENST00000497506 SLC4A2P04920 1241 aa20.84■□□□□ 0.93
FAM3A-220ENST00000497506 GIGYF2Q6Y7W6 1299 aaKnown RBP20.84■□□□□ 0.93
FAM3A-220ENST00000497506 FHDC1Q9C0D6 1143 aaPredicted RBP20.84■□□□□ 0.93
FAM3A-220ENST00000497506 SETDB2Q96T68 719 aa20.83■□□□□ 0.93
FAM3A-220ENST00000497506 KIF13BQ9NQT8 1826 aa20.83■□□□□ 0.92
FAM3A-220ENST00000497506 ATP10DQ9P241 1426 aa20.82■□□□□ 0.92
FAM3A-220ENST00000497506 SERPINB2P05120 415 aa20.82■□□□□ 0.92
FAM3A-220ENST00000497506 ANKRD13DQ6ZTN6 518 aa20.82■□□□□ 0.92
FAM3A-220ENST00000497506 G2E3Q7L622 706 aa20.82■□□□□ 0.92
FAM3A-220ENST00000497506 PLBD2Q8NHP8 589 aa20.82■□□□□ 0.92
FAM3A-220ENST00000497506 NIP7Q9Y221 180 aaKnown RBP eCLIP20.82■□□□□ 0.92
FAM3A-220ENST00000497506 CARMIL3Q8ND23 1372 aa20.82■□□□□ 0.92
FAM3A-220ENST00000497506 ANKRD36CQ5JPF3 1778 aa20.82■□□□□ 0.92
FAM3A-220ENST00000497506 ARFGEF2Q9Y6D5 1785 aa20.82■□□□□ 0.92
FAM3A-220ENST00000497506 ZNF34Q8IZ26 560 aa20.81■□□□□ 0.92
FAM3A-220ENST00000497506 SYT17Q9BSW7 474 aa20.81■□□□□ 0.92
FAM3A-220ENST00000497506 C10orf71Q711Q0 1435 aa20.8■□□□□ 0.92
FAM3A-220ENST00000497506 KLHL34Q8N239 644 aa20.8■□□□□ 0.92
FAM3A-220ENST00000497506 CD2APQ9Y5K6 639 aa20.8■□□□□ 0.92
FAM3A-220ENST00000497506 CT47B1P0C2W7 299 aaPredicted RBP20.78■□□□□ 0.92
FAM3A-220ENST00000497506 GPTP24298 496 aa20.78■□□□□ 0.92
FAM3A-220ENST00000497506 TCIRG1Q13488 830 aa20.78■□□□□ 0.92
FAM3A-220ENST00000497506 ZNF428Q96B54 188 aa20.78■□□□□ 0.92
FAM3A-220ENST00000497506 UBN2Q6ZU65 1347 aa20.78■□□□□ 0.92
FAM3A-220ENST00000497506 FLIIQ13045 1269 aa20.77■□□□□ 0.92
FAM3A-220ENST00000497506 HSP90AB3PQ58FF7 597 aa20.77■□□□□ 0.92
FAM3A-220ENST00000497506 RIC3Q7Z5B4 369 aa20.77■□□□□ 0.92
FAM3A-220ENST00000497506 NLGN2Q8NFZ4 835 aa20.77■□□□□ 0.92
FAM3A-220ENST00000497506 KIAA1551Q9HCM1 1747 aa20.77■□□□□ 0.92
FAM3A-220ENST00000497506 DDX58O95786 925 aaKnown RBP20.76■□□□□ 0.91
FAM3A-220ENST00000497506 PRR5LQ6MZQ0 368 aa20.76■□□□□ 0.91
FAM3A-220ENST00000497506 MRPL50Q8N5N7 158 aaKnown RBP20.76■□□□□ 0.91
FAM3A-220ENST00000497506 SSH1Q8WYL5 1049 aa20.76■□□□□ 0.91
FAM3A-220ENST00000497506 ANKRD31Q8N7Z5 1873 aa20.75■□□□□ 0.91
FAM3A-220ENST00000497506 ADCY9O60503 1353 aa20.75■□□□□ 0.91
FAM3A-220ENST00000497506 PI4KAP2A4QPH2 592 aa20.75■□□□□ 0.91
FAM3A-220ENST00000497506 SUSD4Q5VX71 490 aa20.75■□□□□ 0.91
FAM3A-220ENST00000497506 KSR2Q6VAB6 950 aa20.75■□□□□ 0.91
FAM3A-220ENST00000497506 NBPF5PQ86XG9 351 aaPredicted RBP20.75■□□□□ 0.91
FAM3A-220ENST00000497506 PI4KAP1Q8N8J0 262 aa20.75■□□□□ 0.91
FAM3A-220ENST00000497506 ISCA1Q9BUE6 129 aa20.75■□□□□ 0.91
FAM3A-220ENST00000497506 FAM177BA6PVY3 158 aa20.74■□□□□ 0.91
FAM3A-220ENST00000497506 ALDH1L2Q3SY69 923 aa20.74■□□□□ 0.91
FAM3A-220ENST00000497506 PARP10Q53GL7 1025 aa20.74■□□□□ 0.91
FAM3A-220ENST00000497506 CCDC24Q8N4L8 307 aa20.74■□□□□ 0.91
FAM3A-220ENST00000497506 CNBD1Q8NA66 436 aa20.74■□□□□ 0.91
FAM3A-220ENST00000497506 MAP3K2Q9Y2U5 619 aa20.74■□□□□ 0.91
FAM3A-220ENST00000497506 N4BP2Q86UW6 1770 aaPredicted RBP20.73■□□□□ 0.91
FAM3A-220ENST00000497506 FKBP5Q13451 457 aaPredicted RBP20.73■□□□□ 0.91
FAM3A-220ENST00000497506 TPTE2Q6XPS3 522 aa20.73■□□□□ 0.91
FAM3A-220ENST00000497506 NLRP10Q86W26 655 aa20.73■□□□□ 0.91
FAM3A-220ENST00000497506 METTL22Q9BUU2 404 aaPredicted RBP20.73■□□□□ 0.91
FAM3A-220ENST00000497506 IBTKQ9P2D0 1353 aaPredicted RBP20.72■□□□□ 0.91
FAM3A-220ENST00000497506 ATP5J2-PTCD1G3V325 749 aa20.72■□□□□ 0.91
FAM3A-220ENST00000497506 NTSR2O95665 410 aa20.72■□□□□ 0.91
FAM3A-220ENST00000497506 TRIM28Q13263 835 aaKnown RBP20.72■□□□□ 0.91
FAM3A-220ENST00000497506 PXDNLA1KZ92 1463 aa20.72■□□□□ 0.91
FAM3A-220ENST00000497506 RARSP54136 660 aaKnown RBP20.71■□□□□ 0.91
FAM3A-220ENST00000497506 TGFB2P61812 414 aa20.71■□□□□ 0.91
FAM3A-220ENST00000497506 MYD88Q99836 296 aa20.71■□□□□ 0.91
FAM3A-220ENST00000497506 BRIP1Q9BX63 1249 aa20.71■□□□□ 0.91
FAM3A-220ENST00000497506 BCL2L13Q9BXK5 485 aa20.71■□□□□ 0.91
FAM3A-220ENST00000497506 NYXQ9GZU5 481 aa20.71■□□□□ 0.91
FAM3A-220ENST00000497506 ST5P78524 1137 aa20.7■□□□□ 0.9
FAM3A-220ENST00000497506 PPP1R42Q7Z4L9 355 aa20.7■□□□□ 0.9
FAM3A-220ENST00000497506 A0A0G2JLW4 131 aa20.69■□□□□ 0.9
FAM3A-220ENST00000497506 NPHP1O15259 732 aa20.69■□□□□ 0.9
FAM3A-220ENST00000497506 DPEP1P16444 411 aa20.69■□□□□ 0.9
FAM3A-220ENST00000497506 ERFEQ4G0M1 354 aa20.69■□□□□ 0.9
FAM3A-220ENST00000497506 NUTM1Q86Y26 1132 aa20.69■□□□□ 0.9
FAM3A-220ENST00000497506 DNAAF4Q8WXU2 420 aa20.69■□□□□ 0.9
FAM3A-220ENST00000497506 UTP14AQ9BVJ6 771 aaKnown RBP20.69■□□□□ 0.9
FAM3A-220ENST00000497506 SMC4Q9NTJ3 1288 aa20.69■□□□□ 0.9
FAM3A-220ENST00000497506 IGKV5-2P06315 115 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms