RNA–Protein interactions for RNA: ENST00000497210.5

CTPS1-211, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-211ENST00000497210 AEBP1Q8IUX7 1158 aa12.74□□□□□ -0.37
CTPS1-211ENST00000497210 FNBP4Q8N3X1 1017 aaPredicted RBP12.74□□□□□ -0.37
CTPS1-211ENST00000497210 USHBP1Q8N6Y0 703 aa12.74□□□□□ -0.37
CTPS1-211ENST00000497210 CDCA7Q9BWT1 371 aaPredicted RBP12.74□□□□□ -0.37
CTPS1-211ENST00000497210 USP21Q9UK80 565 aa12.74□□□□□ -0.37
CTPS1-211ENST00000497210 THRAP3Q9Y2W1 955 aaKnown RBP12.74□□□□□ -0.37
CTPS1-211ENST00000497210 BCL9LQ86UU0 1499 aa12.73□□□□□ -0.37
CTPS1-211ENST00000497210 AFF2P51816 1311 aa12.73□□□□□ -0.37
CTPS1-211ENST00000497210 NUDT18Q6ZVK8 323 aa12.73□□□□□ -0.37
CTPS1-211ENST00000497210 PLEKHF1Q96S99 279 aa12.73□□□□□ -0.37
CTPS1-211ENST00000497210 FAM217BQ9NTX9 383 aaPredicted RBP12.73□□□□□ -0.37
CTPS1-211ENST00000497210 CCDC9Q9Y3X0 531 aaKnown RBP12.73□□□□□ -0.37
CTPS1-211ENST00000497210 TNS2Q63HR2 1409 aa12.72□□□□□ -0.37
CTPS1-211ENST00000497210 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.72□□□□□ -0.37
CTPS1-211ENST00000497210 APAF1O14727 1248 aa12.72□□□□□ -0.37
CTPS1-211ENST00000497210 IL2RBP14784 551 aa12.72□□□□□ -0.37
CTPS1-211ENST00000497210 VPS72Q15906 364 aa12.72□□□□□ -0.37
CTPS1-211ENST00000497210 NFE2L2Q16236 605 aa12.72□□□□□ -0.37
CTPS1-211ENST00000497210 PACS2Q86VP3 889 aa12.72□□□□□ -0.37
CTPS1-211ENST00000497210 TCP11L2Q8N4U5 519 aa12.72□□□□□ -0.37
CTPS1-211ENST00000497210 TATDN2Q93075 761 aa12.72□□□□□ -0.37
CTPS1-211ENST00000497210 LRRC37A3O60309 1634 aa12.72□□□□□ -0.37
CTPS1-211ENST00000497210 SPATA31A1Q5TZJ5 1347 aa12.71□□□□□ -0.37
CTPS1-211ENST00000497210 SPATA31A5Q5VU36 1347 aa12.71□□□□□ -0.37
CTPS1-211ENST00000497210 SPATA31A7Q8IWB4 1347 aa12.71□□□□□ -0.37
CTPS1-211ENST00000497210 PCDH11XQ9BZA7 1347 aa12.71□□□□□ -0.37
CTPS1-211ENST00000497210 PCDH11YQ9BZA8 1340 aa12.71□□□□□ -0.37
CTPS1-211ENST00000497210 DLG5Q8TDM6 1919 aa12.71□□□□□ -0.37
CTPS1-211ENST00000497210 RCCD1A6NED2 376 aa12.71□□□□□ -0.37
CTPS1-211ENST00000497210 FAM205CA6NFA0 338 aa12.71□□□□□ -0.37
CTPS1-211ENST00000497210 PBX2P40425 430 aa12.71□□□□□ -0.37
CTPS1-211ENST00000497210 PLEKHO1Q53GL0 409 aaPredicted RBP12.71□□□□□ -0.37
CTPS1-211ENST00000497210 ZNF687Q8N1G0 1237 aa12.71□□□□□ -0.37
CTPS1-211ENST00000497210 PNMA3Q9UL41 463 aa12.71□□□□□ -0.37
CTPS1-211ENST00000497210 SPG7Q9UQ90 795 aa12.71□□□□□ -0.37
CTPS1-211ENST00000497210 DISP2A7MBM2 1401 aa12.71□□□□□ -0.38
CTPS1-211ENST00000497210 ATRNO75882 1429 aa12.71□□□□□ -0.38
CTPS1-211ENST00000497210 MAP3K5Q99683 1374 aa12.7□□□□□ -0.38
CTPS1-211ENST00000497210 SSTR3P32745 418 aaPredicted RBP12.7□□□□□ -0.38
CTPS1-211ENST00000497210 CALD1Q05682 793 aaKnown RBP12.7□□□□□ -0.38
CTPS1-211ENST00000497210 CCDC27Q2M243 656 aa12.7□□□□□ -0.38
CTPS1-211ENST00000497210 C1orf141Q5JVX7 400 aa12.7□□□□□ -0.38
CTPS1-211ENST00000497210 ZNF772Q68DY9 489 aaPredicted RBP12.7□□□□□ -0.38
CTPS1-211ENST00000497210 SLC4A5Q9BY07 1137 aa12.7□□□□□ -0.38
CTPS1-211ENST00000497210 USP35Q9P2H5 1018 aa12.7□□□□□ -0.38
CTPS1-211ENST00000497210 TRPC5Q9UL62 973 aaPredicted RBP12.7□□□□□ -0.38
CTPS1-211ENST00000497210 SHANK3Q9BYB0 1731 aa12.69□□□□□ -0.38
CTPS1-211ENST00000497210 TMPOP42166 694 aaKnown RBP12.69□□□□□ -0.38
CTPS1-211ENST00000497210 DMRTA1Q5VZB9 504 aa12.69□□□□□ -0.38
CTPS1-211ENST00000497210 RTF1Q92541 710 aaKnown RBP12.69□□□□□ -0.38
CTPS1-211ENST00000497210 THSD7AQ9UPZ6 1657 aa12.69□□□□□ -0.38
CTPS1-211ENST00000497210 POTEB3A0JP26 581 aa12.68□□□□□ -0.38
CTPS1-211ENST00000497210 ZNF530Q6P9A1 599 aaPredicted RBP12.68□□□□□ -0.38
CTPS1-211ENST00000497210 POTEBQ6S5H4 581 aa12.68□□□□□ -0.38
CTPS1-211ENST00000497210 GLI3P10071 1580 aa12.68□□□□□ -0.38
CTPS1-211ENST00000497210 HTATSF1O43719 755 aaKnown RBP12.67□□□□□ -0.38
CTPS1-211ENST00000497210 HSP90AB1P08238 724 aaKnown RBP12.67□□□□□ -0.38
CTPS1-211ENST00000497210 DNAJB2P25686 324 aa12.67□□□□□ -0.38
CTPS1-211ENST00000497210 RIPK4P57078 832 aa12.67□□□□□ -0.38
CTPS1-211ENST00000497210 PDE3BQ13370 1112 aa12.67□□□□□ -0.38
CTPS1-211ENST00000497210 AKAP4Q5JQC9 854 aa12.67□□□□□ -0.38
CTPS1-211ENST00000497210 HS3ST6Q96QI5 342 aa12.67□□□□□ -0.38
CTPS1-211ENST00000497210 KIAA1468Q9P260 1216 aa12.67□□□□□ -0.38
CTPS1-211ENST00000497210 VIRMAQ69YN4 1812 aaKnown RBP12.67□□□□□ -0.38
CTPS1-211ENST00000497210 GNAT3A8MTJ3 354 aa12.66□□□□□ -0.38
CTPS1-211ENST00000497210 SMAPO00193 183 aa12.66□□□□□ -0.38
CTPS1-211ENST00000497210 MTHFSDQ2M296 383 aaKnown RBP12.66□□□□□ -0.38
CTPS1-211ENST00000497210 PHACTR3Q96KR7 559 aa12.66□□□□□ -0.38
CTPS1-211ENST00000497210 TMEM134Q9H6X4 195 aa12.66□□□□□ -0.38
CTPS1-211ENST00000497210 RRP7AQ9Y3A4 280 aaKnown RBP12.66□□□□□ -0.38
CTPS1-211ENST00000497210 ADAMTS7Q9UKP4 1686 aa12.66□□□□□ -0.38
CTPS1-211ENST00000497210 A0A0G2JS52 829 aa12.65□□□□□ -0.38
CTPS1-211ENST00000497210 CENPBP07199 599 aaPredicted RBP12.65□□□□□ -0.38
CTPS1-211ENST00000497210 MYT1Q01538 1121 aa12.65□□□□□ -0.38
CTPS1-211ENST00000497210 IFNL2Q8IZJ0 200 aa12.65□□□□□ -0.38
CTPS1-211ENST00000497210 ZCRB1Q8TBF4 217 aaKnown RBP12.65□□□□□ -0.38
CTPS1-211ENST00000497210 RABGEF1Q9UJ41 708 aa12.65□□□□□ -0.38
CTPS1-211ENST00000497210 SCN11AQ9UI33 1791 aa12.64□□□□□ -0.39
CTPS1-211ENST00000497210 DDB1Q16531 1140 aa12.64□□□□□ -0.39
CTPS1-211ENST00000497210 WDR63Q8IWG1 891 aa12.64□□□□□ -0.39
CTPS1-211ENST00000497210 WWC1Q8IX03 1113 aa12.64□□□□□ -0.39
CTPS1-211ENST00000497210 GJD4Q96KN9 370 aaPredicted RBP12.64□□□□□ -0.39
CTPS1-211ENST00000497210 BEGAINQ9BUH8 593 aa12.64□□□□□ -0.39
CTPS1-211ENST00000497210 GOPCQ9HD26 462 aa12.64□□□□□ -0.39
CTPS1-211ENST00000497210 SALL2Q9Y467 1007 aaPredicted RBP12.64□□□□□ -0.39
CTPS1-211ENST00000497210 MRC1P22897 1456 aa12.64□□□□□ -0.39
CTPS1-211ENST00000497210 IL16Q14005 1332 aa12.63□□□□□ -0.39
CTPS1-211ENST00000497210 ZNF521Q96K83 1311 aa12.62□□□□□ -0.39
CTPS1-211ENST00000497210 E9PSI1 815 aa12.62□□□□□ -0.39
CTPS1-211ENST00000497210 EXOC5O00471 708 aa12.62□□□□□ -0.39
CTPS1-211ENST00000497210 PHKG2P15735 406 aa12.62□□□□□ -0.39
CTPS1-211ENST00000497210 FAM98CQ17RN3 349 aaKnown RBP12.62□□□□□ -0.39
CTPS1-211ENST00000497210 VPS9D1Q9Y2B5 631 aa12.62□□□□□ -0.39
CTPS1-211ENST00000497210 CEMIPQ8WUJ3 1361 aa12.61□□□□□ -0.39
CTPS1-211ENST00000497210 DCAF5Q96JK2 942 aa12.61□□□□□ -0.39
CTPS1-211ENST00000497210 MYH16Q9H6N6 1097 aa12.61□□□□□ -0.39
CTPS1-211ENST00000497210 QTRT2Q9H974 415 aaKnown RBP12.61□□□□□ -0.39
CTPS1-211ENST00000497210 DOT1LQ8TEK3 1739 aa12.61□□□□□ -0.39
CTPS1-211ENST00000497210 SIPA1L3O60292 1781 aaPredicted RBP12.61□□□□□ -0.39
CTPS1-211ENST00000497210 RBM6P78332 1123 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms