RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 POTEIP0CG38 1075 aa17.37■□□□□ 0.37
PHGDH-207ENST00000496756 POTEJP0CG39 1038 aa17.37■□□□□ 0.37
PHGDH-207ENST00000496756 PRR5LQ6MZQ0 368 aa17.37■□□□□ 0.37
PHGDH-207ENST00000496756 TEX13AQ9BXU3 409 aaPredicted RBP17.37■□□□□ 0.37
PHGDH-207ENST00000496756 VIRMAQ69YN4 1812 aaKnown RBP17.37■□□□□ 0.37
PHGDH-207ENST00000496756 TMEM88BA6NKF7 163 aa17.36■□□□□ 0.37
PHGDH-207ENST00000496756 NPHP1O15259 732 aa17.36■□□□□ 0.37
PHGDH-207ENST00000496756 STYK1Q6J9G0 422 aa17.36■□□□□ 0.37
PHGDH-207ENST00000496756 NPM2Q86SE8 214 aaKnown RBP17.36■□□□□ 0.37
PHGDH-207ENST00000496756 NGEFQ8N5V2 710 aa17.36■□□□□ 0.37
PHGDH-207ENST00000496756 L3MBTL3Q96JM7 780 aaPredicted RBP17.36■□□□□ 0.37
PHGDH-207ENST00000496756 UBR2Q8IWV8 1755 aa17.35■□□□□ 0.37
PHGDH-207ENST00000496756 SCN4AP35499 1836 aa17.35■□□□□ 0.37
PHGDH-207ENST00000496756 PRPF40BQ6NWY9 871 aaKnown RBP17.35■□□□□ 0.37
PHGDH-207ENST00000496756 CNBD1Q8NA66 436 aa17.35■□□□□ 0.37
PHGDH-207ENST00000496756 SETDB2Q96T68 719 aa17.35■□□□□ 0.37
PHGDH-207ENST00000496756 COL11A2P13942 1736 aaPredicted RBP17.34■□□□□ 0.37
PHGDH-207ENST00000496756 VEGFBP49765 207 aa17.34■□□□□ 0.37
PHGDH-207ENST00000496756 ST5P78524 1137 aa17.34■□□□□ 0.37
PHGDH-207ENST00000496756 MASTLQ96GX5 879 aa17.34■□□□□ 0.37
PHGDH-207ENST00000496756 TAF1DQ9H5J8 278 aaPredicted RBP17.34■□□□□ 0.37
PHGDH-207ENST00000496756 SCN7AQ01118 1682 aa17.33■□□□□ 0.37
PHGDH-207ENST00000496756 SLC34A2O95436 690 aa17.33■□□□□ 0.36
PHGDH-207ENST00000496756 SRGNP10124 158 aa17.33■□□□□ 0.36
PHGDH-207ENST00000496756 IL6STP40189 918 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-207ENST00000496756 MTHFSDQ2M296 383 aaKnown RBP17.33■□□□□ 0.36
PHGDH-207ENST00000496756 CCDC24Q8N4L8 307 aa17.33■□□□□ 0.36
PHGDH-207ENST00000496756 WBP1LQ9NX94 342 aa17.33■□□□□ 0.36
PHGDH-207ENST00000496756 TBC1D2BQ9UPU7 963 aa17.33■□□□□ 0.36
PHGDH-207ENST00000496756 ZNF330Q9Y3S2 320 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-207ENST00000496756 ITGBL1O95965 494 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-207ENST00000496756 HMOX1P09601 288 aa17.32■□□□□ 0.36
PHGDH-207ENST00000496756 SLX4Q8IY92 1834 aa17.32■□□□□ 0.36
PHGDH-207ENST00000496756 HEG1Q9ULI3 1381 aa17.31■□□□□ 0.36
PHGDH-207ENST00000496756 LBX1P52954 281 aa17.31■□□□□ 0.36
PHGDH-207ENST00000496756 ZNF496Q96IT1 587 aaPredicted RBP17.31■□□□□ 0.36
PHGDH-207ENST00000496756 GTF3C3Q9Y5Q9 886 aa17.31■□□□□ 0.36
PHGDH-207ENST00000496756 ARFGEF2Q9Y6D5 1785 aa17.3■□□□□ 0.36
PHGDH-207ENST00000496756 TEFQ10587 303 aa17.3■□□□□ 0.36
PHGDH-207ENST00000496756 CCDC93Q567U6 631 aa17.3■□□□□ 0.36
PHGDH-207ENST00000496756 EAPPQ56P03 285 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-207ENST00000496756 ZNF790Q6PG37 636 aa17.3■□□□□ 0.36
PHGDH-207ENST00000496756 PNMA8AQ86V59 439 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-207ENST00000496756 HACL1Q9UJ83 578 aa17.3■□□□□ 0.36
PHGDH-207ENST00000496756 RASSF10A6NK89 507 aa17.29■□□□□ 0.36
PHGDH-207ENST00000496756 MAP2K1Q02750 393 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-207ENST00000496756 DEFB115Q30KQ5 88 aa17.29■□□□□ 0.36
PHGDH-207ENST00000496756 CLEC11AQ9Y240 323 aa17.29■□□□□ 0.36
PHGDH-207ENST00000496756 CACNA1SQ13698 1873 aa17.29■□□□□ 0.36
PHGDH-207ENST00000496756 CAMTA2O94983 1202 aa17.28■□□□□ 0.36
PHGDH-207ENST00000496756 ABHD8Q96I13 439 aa17.28■□□□□ 0.36
PHGDH-207ENST00000496756 ADAMTS8Q9UP79 889 aa17.28■□□□□ 0.36
PHGDH-207ENST00000496756 NUDCQ9Y266 331 aa17.28■□□□□ 0.36
PHGDH-207ENST00000496756 DIAPH1O60610 1272 aaKnown RBP17.27■□□□□ 0.36
PHGDH-207ENST00000496756 NPR1P16066 1061 aa17.27■□□□□ 0.36
PHGDH-207ENST00000496756 EPHX2P34913 555 aa17.27■□□□□ 0.36
PHGDH-207ENST00000496756 FKBP4Q02790 459 aaKnown RBP eCLIP17.27■□□□□ 0.36
PHGDH-207ENST00000496756 RTKN2Q8IZC4 609 aa17.27■□□□□ 0.36
PHGDH-207ENST00000496756 C7orf43Q8WVR3 580 aa17.27■□□□□ 0.36
PHGDH-207ENST00000496756 FMNL2Q96PY5 1086 aa17.27■□□□□ 0.36
PHGDH-207ENST00000496756 NEFLP07196 543 aa17.26■□□□□ 0.35
PHGDH-207ENST00000496756 HSPA8P11142 646 aaKnown RBP17.26■□□□□ 0.35
PHGDH-207ENST00000496756 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
PHGDH-207ENST00000496756 CLEC4GQ6UXB4 293 aa17.26■□□□□ 0.35
PHGDH-207ENST00000496756 NBPF5PQ86XG9 351 aaPredicted RBP17.26■□□□□ 0.35
PHGDH-207ENST00000496756 DZIP3Q86Y13 1208 aaKnown RBP17.26■□□□□ 0.35
PHGDH-207ENST00000496756 CNTROBQ8N137 903 aa17.26■□□□□ 0.35
PHGDH-207ENST00000496756 GNAT3A8MTJ3 354 aa17.25■□□□□ 0.35
PHGDH-207ENST00000496756 A1BGP04217 495 aa17.25■□□□□ 0.35
PHGDH-207ENST00000496756 FAM161AQ3B820 660 aa17.25■□□□□ 0.35
PHGDH-207ENST00000496756 PNNQ9H307 717 aaKnown RBP17.25■□□□□ 0.35
PHGDH-207ENST00000496756 ZNF652Q9Y2D9 606 aa17.25■□□□□ 0.35
PHGDH-207ENST00000496756 WDR33Q9C0J8 1336 aaKnown RBP17.24■□□□□ 0.35
PHGDH-207ENST00000496756 ZNF541Q9H0D2 1346 aa17.24■□□□□ 0.35
PHGDH-207ENST00000496756 GAS2L2Q8NHY3 880 aa17.24■□□□□ 0.35
PHGDH-207ENST00000496756 ZNF277Q9NRM2 450 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-207ENST00000496756 ABT1Q9ULW3 272 aaKnown RBP17.24■□□□□ 0.35
PHGDH-207ENST00000496756 ADAMTSL1Q8N6G6 1762 aa17.24■□□□□ 0.35
PHGDH-207ENST00000496756 KLRG2A4D1S0 409 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-207ENST00000496756 MAP1SQ66K74 1059 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-207ENST00000496756 GPC2Q8N158 579 aa17.23■□□□□ 0.35
PHGDH-207ENST00000496756 IL17REQ8NFR9 667 aa17.23■□□□□ 0.35
PHGDH-207ENST00000496756 BEGAINQ9BUH8 593 aa17.23■□□□□ 0.35
PHGDH-207ENST00000496756 BCORQ6W2J9 1755 aa17.23■□□□□ 0.35
PHGDH-207ENST00000496756 FZD9O00144 591 aa17.22■□□□□ 0.35
PHGDH-207ENST00000496756 ALDH1B1P30837 517 aa17.22■□□□□ 0.35
PHGDH-207ENST00000496756 TPTE2Q6XPS3 522 aa17.22■□□□□ 0.35
PHGDH-207ENST00000496756 RNF123Q5XPI4 1314 aa17.21■□□□□ 0.35
PHGDH-207ENST00000496756 SIPA1L3O60292 1781 aaPredicted RBP17.21■□□□□ 0.35
PHGDH-207ENST00000496756 RGL2O15211 777 aa17.21■□□□□ 0.35
PHGDH-207ENST00000496756 IARSP41252 1262 aaKnown RBP17.21■□□□□ 0.35
PHGDH-207ENST00000496756 MLLT1Q03111 559 aaPredicted RBP17.21■□□□□ 0.35
PHGDH-207ENST00000496756 JDP2Q8WYK2 163 aa17.21■□□□□ 0.35
PHGDH-207ENST00000496756 ECE1P42892 770 aa17.2■□□□□ 0.34
PHGDH-207ENST00000496756 DDX21Q9NR30 783 aaKnown RBP eCLIP17.2■□□□□ 0.34
PHGDH-207ENST00000496756 BTBD11A6QL63 1104 aa17.19■□□□□ 0.34
PHGDH-207ENST00000496756 SYNE4Q8N205 404 aa17.19■□□□□ 0.34
PHGDH-207ENST00000496756 RUNDC1Q96C34 613 aa17.19■□□□□ 0.34
PHGDH-207ENST00000496756 CEMIPQ8WUJ3 1361 aa17.18■□□□□ 0.34
PHGDH-207ENST00000496756 LMOD1P29536 600 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms