RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 NUP133Q8WUM0 1156 aa9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 SPINK5Q9NQ38 1064 aaPredicted RBP9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 STX6O43752 255 aa9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 PHACTR2O75167 634 aa9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 MCM3P25205 808 aa9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 CORO7P57737 925 aa9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 ANAPC15P60006 121 aa9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 CCDC50Q8IVM0 306 aa9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 TEX11Q8IYF3 940 aa9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 CARD6Q9BX69 1037 aa9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 PPFIA4O75335 1185 aa9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 CYP2E1P05181 493 aaPredicted RBP9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 ELF1P32519 619 aa9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 BSDC1Q9NW68 430 aaPredicted RBP9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 PTPRKQ15262 1439 aa9.49□□□□□ -0.89
CRNKL1-205ENST00000496549 PLEKHG2Q9H7P9 1386 aa9.49□□□□□ -0.89
CRNKL1-205ENST00000496549 CCDC30Q5VVM6 783 aa9.49□□□□□ -0.89
CRNKL1-205ENST00000496549 B4GALNT4Q76KP1 1039 aa9.49□□□□□ -0.89
CRNKL1-205ENST00000496549 TUBBP07437 444 aa9.49□□□□□ -0.89
CRNKL1-205ENST00000496549 TRIM27P14373 513 aa9.49□□□□□ -0.89
CRNKL1-205ENST00000496549 SPATA32Q96LK8 384 aa9.49□□□□□ -0.89
CRNKL1-205ENST00000496549 UPF3BQ9BZI7 483 aaKnown RBP9.49□□□□□ -0.89
CRNKL1-205ENST00000496549 SCAND2PQ9GZW5 306 aaPredicted RBP9.49□□□□□ -0.89
CRNKL1-205ENST00000496549 CFDP1Q9UEE9 299 aaPredicted RBP9.49□□□□□ -0.89
CRNKL1-205ENST00000496549 LCMT1Q9UIC8 334 aa9.49□□□□□ -0.89
CRNKL1-205ENST00000496549 IQGAP2Q13576 1575 aa9.49□□□□□ -0.89
CRNKL1-205ENST00000496549 CTAGE5O15320 804 aa9.49□□□□□ -0.89
CRNKL1-205ENST00000496549 SEC31AO94979 1220 aaKnown RBP9.49□□□□□ -0.89
CRNKL1-205ENST00000496549 EXOSC9Q06265 439 aaKnown RBP9.49□□□□□ -0.89
CRNKL1-205ENST00000496549 BRD3Q15059 726 aa9.49□□□□□ -0.89
CRNKL1-205ENST00000496549 LRRC8AQ8IWT6 810 aa9.49□□□□□ -0.89
CRNKL1-205ENST00000496549 TBC1D22AQ8WUA7 517 aa9.49□□□□□ -0.89
CRNKL1-205ENST00000496549 USP26Q9BXU7 913 aa9.49□□□□□ -0.89
CRNKL1-205ENST00000496549 ZCCHC17Q9NP64 241 aaKnown RBP9.49□□□□□ -0.89
CRNKL1-205ENST00000496549 ZNF521Q96K83 1311 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 H3BQV1 296 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 CHUKO15111 745 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 PEX19P40855 299 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 IFFO2Q5TF58 517 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 TRMT2AQ8IZ69 625 aaKnown RBP9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 PIK3R5Q8WYR1 880 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 ANO10Q9NW15 660 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 CAPN7Q9Y6W3 813 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 HECW1Q76N89 1606 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 TEX14Q8IWB6 1497 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 ARHGAP25P42331 645 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 CEP85LQ5SZL2 805 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 TNNQ9UQP3 1299 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 RALGAPBQ86X10 1494 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 ROCK1Q13464 1354 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 VIRMAQ69YN4 1812 aaKnown RBP9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 PTPRCP08575 1304 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 PER1O15534 1290 aaPredicted RBP9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 PLA2G4AP47712 749 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 GNG11P61952 73 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 PPP2R3AQ06190 1150 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 CACTINQ8WUQ7 758 aaKnown RBP9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 FBXW7Q969H0 707 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 ORC3Q9UBD5 711 aaPredicted RBP9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 CAMSAP2Q08AD1 1489 aa9.48□□□□□ -0.89
CRNKL1-205ENST00000496549 CHAMP1Q96JM3 812 aa9.47□□□□□ -0.89
CRNKL1-205ENST00000496549 SDF4Q9BRK5 362 aa9.47□□□□□ -0.89
CRNKL1-205ENST00000496549 CBX8Q9HC52 389 aa9.47□□□□□ -0.89
CRNKL1-205ENST00000496549 FHOD1Q9Y613 1164 aa9.47□□□□□ -0.89
CRNKL1-205ENST00000496549 ANKRD65E5RJM6 399 aa9.47□□□□□ -0.89
CRNKL1-205ENST00000496549 CBFA2T2O43439 604 aa9.47□□□□□ -0.89
CRNKL1-205ENST00000496549 RWDD2BP57060 319 aa9.47□□□□□ -0.89
CRNKL1-205ENST00000496549 STX1AQ16623 288 aa9.47□□□□□ -0.89
CRNKL1-205ENST00000496549 SGSM3Q96HU1 749 aa9.47□□□□□ -0.89
CRNKL1-205ENST00000496549 API5Q9BZZ5 524 aaKnown RBP9.47□□□□□ -0.89
CRNKL1-205ENST00000496549 C1orf115Q9H7X2 142 aa9.47□□□□□ -0.89
CRNKL1-205ENST00000496549 SMARCA5O60264 1052 aaPredicted RBP9.47□□□□□ -0.89
CRNKL1-205ENST00000496549 TMC6Q7Z403 805 aa9.47□□□□□ -0.89
CRNKL1-205ENST00000496549 FAM71BQ8TC56 605 aa9.47□□□□□ -0.89
CRNKL1-205ENST00000496549 DNAJC25Q9H1X3 360 aa9.47□□□□□ -0.89
CRNKL1-205ENST00000496549 PLB1Q6P1J6 1458 aa9.47□□□□□ -0.89
CRNKL1-205ENST00000496549 PCF11O94913 1555 aaKnown RBP9.47□□□□□ -0.89
CRNKL1-205ENST00000496549 H2AFXP16104 143 aaPredicted RBP9.46□□□□□ -0.89
CRNKL1-205ENST00000496549 NAIF1Q69YI7 327 aaPredicted RBP9.46□□□□□ -0.89
CRNKL1-205ENST00000496549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.46□□□□□ -0.894e-7■■■□□ 17.8
CRNKL1-205ENST00000496549 CCDC141Q6ZP82 1450 aa9.46□□□□□ -0.89
CRNKL1-205ENST00000496549 ERBINQ96RT1 1412 aa9.46□□□□□ -0.89
CRNKL1-205ENST00000496549 GCFC2P16383 781 aaKnown RBP9.46□□□□□ -0.89
CRNKL1-205ENST00000496549 TRAF1Q13077 416 aa9.46□□□□□ -0.89
CRNKL1-205ENST00000496549 SF3A1Q15459 793 aaKnown RBP9.46□□□□□ -0.89
CRNKL1-205ENST00000496549 PDCD2Q16342 344 aaPredicted RBP9.46□□□□□ -0.89
CRNKL1-205ENST00000496549 TTC22Q5TAA0 569 aa9.46□□□□□ -0.89
CRNKL1-205ENST00000496549 TTC19Q6DKK2 380 aaPredicted RBP9.46□□□□□ -0.89
CRNKL1-205ENST00000496549 NBPF10Q6P3W6 841 aaKnown RBP9.46□□□□□ -0.89
CRNKL1-205ENST00000496549 PDILTQ8N807 584 aa9.46□□□□□ -0.89
CRNKL1-205ENST00000496549 CNNM3Q8NE01 707 aa9.46□□□□□ -0.89
CRNKL1-205ENST00000496549 SCLT1Q96NL6 688 aa9.46□□□□□ -0.89
CRNKL1-205ENST00000496549 SRCIN1Q9C0H9 1055 aa9.46□□□□□ -0.89
CRNKL1-205ENST00000496549 NRBP1Q9UHY1 535 aa9.46□□□□□ -0.89
CRNKL1-205ENST00000496549 F13A1P00488 732 aa9.46□□□□□ -0.9
CRNKL1-205ENST00000496549 FMNL2Q96PY5 1086 aa9.46□□□□□ -0.9
CRNKL1-205ENST00000496549 ZNF446Q9NWS9 450 aa9.46□□□□□ -0.9
CRNKL1-205ENST00000496549 KDM5BQ9UGL1 1544 aa9.46□□□□□ -0.9
CRNKL1-205ENST00000496549 NEFHP12036 1026 aa9.46□□□□□ -0.9
CRNKL1-205ENST00000496549 HSPA4P34932 840 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms