RNA–Protein interactions for RNA: ENST00000496524.5

NPHP1-211, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 10,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-211ENST00000496524 CNNM3Q8NE01 707 aa9.43□□□□□ -0.9
NPHP1-211ENST00000496524 LMBR1Q8WVP7 490 aa9.43□□□□□ -0.9
NPHP1-211ENST00000496524 DRC1Q96MC2 740 aa9.43□□□□□ -0.9
NPHP1-211ENST00000496524 DNAJC8O75937 253 aaPredicted RBP9.42□□□□□ -0.9
NPHP1-211ENST00000496524 FOXD1Q16676 465 aa9.42□□□□□ -0.9
NPHP1-211ENST00000496524 MPNDQ8N594 471 aa9.42□□□□□ -0.9
NPHP1-211ENST00000496524 EFCAB2Q5VUJ9 269 aa9.42□□□□□ -0.9
NPHP1-211ENST00000496524 TRIM35Q9UPQ4 493 aa9.42□□□□□ -0.9
NPHP1-211ENST00000496524 ADCY5O95622 1261 aa9.42□□□□□ -0.9
NPHP1-211ENST00000496524 SATB1Q01826 763 aa9.42□□□□□ -0.9
NPHP1-211ENST00000496524 MLECQ14165 292 aa9.42□□□□□ -0.9
NPHP1-211ENST00000496524 MCM6Q14566 821 aa9.42□□□□□ -0.9
NPHP1-211ENST00000496524 TRMT1Q9NXH9 659 aaKnown RBP9.42□□□□□ -0.9
NPHP1-211ENST00000496524 PANK1Q8TE04 598 aa9.42□□□□□ -0.9
NPHP1-211ENST00000496524 NCAPGQ9BPX3 1015 aa9.42□□□□□ -0.9
NPHP1-211ENST00000496524 U3KPZ7 1027 aaPredicted RBP9.42□□□□□ -0.9
NPHP1-211ENST00000496524 AP1ARQ63HQ0 302 aa9.42□□□□□ -0.9
NPHP1-211ENST00000496524 HS1BP3Q53T59 392 aa9.42□□□□□ -0.9
NPHP1-211ENST00000496524 SEC63Q9UGP8 760 aaKnown RBP9.42□□□□□ -0.9
NPHP1-211ENST00000496524 INTS8Q75QN2 995 aaKnown RBP9.42□□□□□ -0.9
NPHP1-211ENST00000496524 CROCCP2Q86T23 111 aa9.42□□□□□ -0.9
NPHP1-211ENST00000496524 ATP2C2O75185 946 aa9.41□□□□□ -0.9
NPHP1-211ENST00000496524 GIGYF1O75420 1035 aaPredicted RBP9.41□□□□□ -0.9
NPHP1-211ENST00000496524 CLNS1AP54105 237 aaKnown RBP9.41□□□□□ -0.9
NPHP1-211ENST00000496524 BUB1BO60566 1050 aaPredicted RBP9.41□□□□□ -0.9
NPHP1-211ENST00000496524 MAP3K7CLP57077 242 aa9.41□□□□□ -0.9
NPHP1-211ENST00000496524 CASTP20810 708 aaKnown RBP9.41□□□□□ -0.9
NPHP1-211ENST00000496524 RASSF2P50749 326 aa9.41□□□□□ -0.9
NPHP1-211ENST00000496524 NBPF8Q3BBV2 869 aa9.41□□□□□ -0.9
NPHP1-211ENST00000496524 HDXQ7Z353 690 aa9.41□□□□□ -0.9
NPHP1-211ENST00000496524 USP37Q86T82 979 aa9.41□□□□□ -0.9
NPHP1-211ENST00000496524 FAM76AQ8TAV0 307 aa9.41□□□□□ -0.9
NPHP1-211ENST00000496524 TBC1D5Q92609 795 aa9.41□□□□□ -0.9
NPHP1-211ENST00000496524 HVCN1Q96D96 273 aa9.41□□□□□ -0.9
NPHP1-211ENST00000496524 VCX3AQ9NNX9 186 aa9.41□□□□□ -0.9
NPHP1-211ENST00000496524 CCDC18Q5T9S5 1454 aa9.41□□□□□ -0.9
NPHP1-211ENST00000496524 EIF4G1Q04637 1599 aaKnown RBP9.41□□□□□ -0.9
NPHP1-211ENST00000496524 ZNF428Q96B54 188 aa9.41□□□□□ -0.9
NPHP1-211ENST00000496524 SPAG5Q96R06 1193 aa9.41□□□□□ -0.9
NPHP1-211ENST00000496524 CNTLNQ9NXG0 1405 aa9.41□□□□□ -0.9
NPHP1-211ENST00000496524 NECTIN2Q92692 538 aa9.41□□□□□ -0.9
NPHP1-211ENST00000496524 TXNDC16Q9P2K2 825 aa9.41□□□□□ -0.9
NPHP1-211ENST00000496524 EPSTI1Q96J88 318 aa9.41□□□□□ -0.9
NPHP1-211ENST00000496524 MTIF2P46199 727 aaKnown RBP9.4□□□□□ -0.9
NPHP1-211ENST00000496524 VAV2P52735 878 aa9.4□□□□□ -0.9
NPHP1-211ENST00000496524 CFAP157Q5JU67 520 aa9.4□□□□□ -0.9
NPHP1-211ENST00000496524 TMC6Q7Z403 805 aa9.4□□□□□ -0.9
NPHP1-211ENST00000496524 PPM1FP49593 454 aaPredicted RBP9.4□□□□□ -0.9
NPHP1-211ENST00000496524 CAMK4Q16566 473 aa9.4□□□□□ -0.9
NPHP1-211ENST00000496524 SEPT8Q92599 483 aa9.4□□□□□ -0.9
NPHP1-211ENST00000496524 TRAK1Q9UPV9 953 aa9.4□□□□□ -0.9
NPHP1-211ENST00000496524 SCAPERQ9BY12 1400 aa9.4□□□□□ -0.9
NPHP1-211ENST00000496524 SNX16P57768 344 aa9.4□□□□□ -0.9
NPHP1-211ENST00000496524 LRCH2Q5VUJ6 765 aa9.4□□□□□ -0.9
NPHP1-211ENST00000496524 CHD1LQ86WJ1 897 aa9.4□□□□□ -0.9
NPHP1-211ENST00000496524 GAS2L2Q8NHY3 880 aa9.4□□□□□ -0.9
NPHP1-211ENST00000496524 PRPF31Q8WWY3 499 aaKnown RBP9.4□□□□□ -0.9
NPHP1-211ENST00000496524 EIF2AQ9BY44 585 aaKnown RBP9.4□□□□□ -0.9
NPHP1-211ENST00000496524 KRT83P78385 493 aa9.4□□□□□ -0.9
NPHP1-211ENST00000496524 ZC4H2Q9NQZ6 224 aa9.4□□□□□ -0.9
NPHP1-211ENST00000496524 CNNM1Q9NRU3 951 aa9.4□□□□□ -0.9
NPHP1-211ENST00000496524 RPGRIP1LQ68CZ1 1315 aa9.4□□□□□ -0.9
NPHP1-211ENST00000496524 KDM4AO75164 1064 aa9.4□□□□□ -0.9
NPHP1-211ENST00000496524 VPS52Q8N1B4 723 aa9.4□□□□□ -0.9
NPHP1-211ENST00000496524 RAPGEF4Q8WZA2 1011 aa9.4□□□□□ -0.9
NPHP1-211ENST00000496524 JAKMIP1Q96N16 626 aaKnown RBP9.4□□□□□ -0.91
NPHP1-211ENST00000496524 RMND1Q9NWS8 449 aa9.4□□□□□ -0.91
NPHP1-211ENST00000496524 MTRF1LQ9UGC7 380 aaKnown RBP9.4□□□□□ -0.91
NPHP1-211ENST00000496524 RBBP5Q15291 538 aaKnown RBP9.4□□□□□ -0.91
NPHP1-211ENST00000496524 CCDC63Q8NA47 563 aa9.4□□□□□ -0.91
NPHP1-211ENST00000496524 MAP2K2P36507 400 aa9.39□□□□□ -0.91
NPHP1-211ENST00000496524 CCDC144CPQ8IYA2 1237 aa9.39□□□□□ -0.91
NPHP1-211ENST00000496524 EHMT1Q9H9B1 1298 aa9.39□□□□□ -0.91
NPHP1-211ENST00000496524 MRPS9P82933 396 aaKnown RBP9.39□□□□□ -0.91
NPHP1-211ENST00000496524 TUBB2AQ13885 445 aa9.39□□□□□ -0.91
NPHP1-211ENST00000496524 TUBB2BQ9BVA1 445 aa9.39□□□□□ -0.91
NPHP1-211ENST00000496524 UBE2HP62256 183 aa9.39□□□□□ -0.91
NPHP1-211ENST00000496524 HMGB2P26583 209 aaKnown RBP9.39□□□□□ -0.91
NPHP1-211ENST00000496524 RNF10Q8N5U6 811 aaKnown RBP9.39□□□□□ -0.91
NPHP1-211ENST00000496524 DDX27Q96GQ7 796 aaKnown RBP9.39□□□□□ -0.91
NPHP1-211ENST00000496524 THEGQ9P2T0 379 aa9.39□□□□□ -0.91
NPHP1-211ENST00000496524 ATP2B2Q01814 1243 aa9.39□□□□□ -0.91
NPHP1-211ENST00000496524 CEP85LQ5SZL2 805 aa9.39□□□□□ -0.91
NPHP1-211ENST00000496524 MAP3K21Q5TCX8 1036 aa9.39□□□□□ -0.91
NPHP1-211ENST00000496524 KRT86O43790 486 aa9.39□□□□□ -0.91
NPHP1-211ENST00000496524 PDE1CQ14123 709 aaPredicted RBP9.39□□□□□ -0.91
NPHP1-211ENST00000496524 CCDC96Q2M329 555 aa9.39□□□□□ -0.91
NPHP1-211ENST00000496524 FYB2Q5VWT5 728 aa9.39□□□□□ -0.91
NPHP1-211ENST00000496524 CALML4Q96GE6 196 aa9.39□□□□□ -0.91
NPHP1-211ENST00000496524 SEC62Q99442 399 aaKnown RBP9.39□□□□□ -0.91
NPHP1-211ENST00000496524 VPS18Q9P253 973 aa9.39□□□□□ -0.91
NPHP1-211ENST00000496524 BAZ1AQ9NRL2 1556 aaPredicted RBP9.39□□□□□ -0.91
NPHP1-211ENST00000496524 A0A087WZG4 1122 aa9.39□□□□□ -0.91
NPHP1-211ENST00000496524 CCDC40Q4G0X9 1142 aa9.39□□□□□ -0.91
NPHP1-211ENST00000496524 FAN1Q9Y2M0 1017 aa9.39□□□□□ -0.91
NPHP1-211ENST00000496524 TACC3Q9Y6A5 838 aa9.39□□□□□ -0.91
NPHP1-211ENST00000496524 MYCBPQ99417 103 aaPredicted RBP9.38□□□□□ -0.91
NPHP1-211ENST00000496524 WASHC2CQ9Y4E1 1318 aa9.38□□□□□ -0.91
NPHP1-211ENST00000496524 C8orf76Q96K31 380 aa9.38□□□□□ -0.91
NPHP1-211ENST00000496524 PPP1R12CQ9BZL4 782 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms