RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 TOM1L2Q6ZVM7 507 aa14.97□□□□□ -0.01
PDE6B-212ENST00000496514 GDPD2Q9HCC8 539 aa14.97□□□□□ -0.01
PDE6B-212ENST00000496514 KDM6AO15550 1401 aaPredicted RBP14.97□□□□□ -0.01
PDE6B-212ENST00000496514 PRPF40AO75400 957 aaKnown RBP14.97□□□□□ -0.01
PDE6B-212ENST00000496514 CLASRPQ8N2M8 674 aaKnown RBP14.97□□□□□ -0.01
PDE6B-212ENST00000496514 PRDM11Q9NQV5 511 aa14.97□□□□□ -0.01
PDE6B-212ENST00000496514 ZDHHC9Q9Y397 364 aa14.97□□□□□ -0.01
PDE6B-212ENST00000496514 CABP4P57796 275 aa14.96□□□□□ -0.01
PDE6B-212ENST00000496514 UBE3BQ7Z3V4 1068 aa14.96□□□□□ -0.01
PDE6B-212ENST00000496514 DDX21Q9NR30 783 aaKnown RBP eCLIP14.96□□□□□ -0.01
PDE6B-212ENST00000496514 STAP2Q9UGK3 403 aa14.96□□□□□ -0.01
PDE6B-212ENST00000496514 MED1Q15648 1581 aaPredicted RBP14.96□□□□□ -0.01
PDE6B-212ENST00000496514 KAT6BQ8WYB5 2073 aa14.96□□□□□ -0.01
PDE6B-212ENST00000496514 EAF2Q96CJ1 260 aaPredicted RBP14.96□□□□□ -0.01
PDE6B-212ENST00000496514 TCEANC2Q96MN5 208 aa14.96□□□□□ -0.01
PDE6B-212ENST00000496514 CIZ1Q9ULV3 898 aaPredicted RBP14.96□□□□□ -0.01
PDE6B-212ENST00000496514 IFNL2Q8IZJ0 200 aa14.96□□□□□ -0.02
PDE6B-212ENST00000496514 CCDC85AQ96PX6 553 aaPredicted RBP14.96□□□□□ -0.02
PDE6B-212ENST00000496514 SASH1O94885 1247 aa14.95□□□□□ -0.02
PDE6B-212ENST00000496514 PTH1RQ03431 593 aa14.95□□□□□ -0.02
PDE6B-212ENST00000496514 CAVIN1Q6NZI2 390 aaKnown RBP14.95□□□□□ -0.02
PDE6B-212ENST00000496514 HYPKQ9NX55 129 aa14.95□□□□□ -0.02
PDE6B-212ENST00000496514 MST1RQ04912 1400 aa14.95□□□□□ -0.02
PDE6B-212ENST00000496514 RAB11FIP3O75154 756 aa14.95□□□□□ -0.02
PDE6B-212ENST00000496514 HOXB7P09629 217 aa14.95□□□□□ -0.02
PDE6B-212ENST00000496514 MCCP23508 829 aa14.95□□□□□ -0.02
PDE6B-212ENST00000496514 FAM227BQ96M60 508 aa14.95□□□□□ -0.02
PDE6B-212ENST00000496514 A0A0G2JS52 829 aa14.94□□□□□ -0.02
PDE6B-212ENST00000496514 DIAPH3Q9NSV4 1193 aa14.94□□□□□ -0.02
PDE6B-212ENST00000496514 ZNF142P52746 1687 aaPredicted RBP14.94□□□□□ -0.02
PDE6B-212ENST00000496514 G3BP1Q13283 466 aaKnown RBP eCLIP14.94□□□□□ -0.02
PDE6B-212ENST00000496514 CNTROBQ8N137 903 aa14.94□□□□□ -0.02
PDE6B-212ENST00000496514 LINS1Q8NG48 757 aa14.94□□□□□ -0.02
PDE6B-212ENST00000496514 NSFL1CQ9UNZ2 370 aaKnown RBP14.94□□□□□ -0.02
PDE6B-212ENST00000496514 DDX58O95786 925 aaKnown RBP14.94□□□□□ -0.02
PDE6B-212ENST00000496514 KLHL34Q8N239 644 aa14.94□□□□□ -0.02
PDE6B-212ENST00000496514 A1BGP04217 495 aa14.93□□□□□ -0.02
PDE6B-212ENST00000496514 ZBTB3Q9H5J0 574 aa14.93□□□□□ -0.02
PDE6B-212ENST00000496514 SLFNL1Q499Z3 407 aa14.93□□□□□ -0.02
PDE6B-212ENST00000496514 PRPF40BQ6NWY9 871 aaKnown RBP14.93□□□□□ -0.02
PDE6B-212ENST00000496514 ANKRD13DQ6ZTN6 518 aa14.93□□□□□ -0.02
PDE6B-212ENST00000496514 ZNF335Q9H4Z2 1342 aaPredicted RBP14.93□□□□□ -0.02
PDE6B-212ENST00000496514 NEURL1BA8MQ27 555 aa14.92□□□□□ -0.02
PDE6B-212ENST00000496514 NEXNQ0ZGT2 675 aa14.92□□□□□ -0.02
PDE6B-212ENST00000496514 BRINP3Q76B58 766 aa14.92□□□□□ -0.02
PDE6B-212ENST00000496514 SLIT3O75094 1523 aa14.92□□□□□ -0.02
PDE6B-212ENST00000496514 SGSM2O43147 1006 aa14.92□□□□□ -0.02
PDE6B-212ENST00000496514 ADCK5Q3MIX3 580 aa14.92□□□□□ -0.02
PDE6B-212ENST00000496514 L1TD1Q5T7N2 865 aaKnown RBP14.92□□□□□ -0.02
PDE6B-212ENST00000496514 KIAA1211Q6ZU35 1233 aa14.92□□□□□ -0.02
PDE6B-212ENST00000496514 CADPS2Q86UW7 1296 aa14.92□□□□□ -0.02
PDE6B-212ENST00000496514 GRPEL1Q9HAV7 217 aa14.92□□□□□ -0.02
PDE6B-212ENST00000496514 KDM3BQ7LBC6 1761 aa14.92□□□□□ -0.02
PDE6B-212ENST00000496514 GOLGA6L22H0YM25 854 aa14.92□□□□□ -0.02
PDE6B-212ENST00000496514 TTLL7Q6ZT98 887 aa14.92□□□□□ -0.02
PDE6B-212ENST00000496514 KCNJ4P48050 445 aa14.91□□□□□ -0.02
PDE6B-212ENST00000496514 GCKRQ14397 625 aa14.91□□□□□ -0.02
PDE6B-212ENST00000496514 ECHDC1Q9NTX5 307 aa14.91□□□□□ -0.02
PDE6B-212ENST00000496514 SNX14Q9Y5W7 946 aa14.91□□□□□ -0.02
PDE6B-212ENST00000496514 A0A087WZG4 1122 aa14.91□□□□□ -0.02
PDE6B-212ENST00000496514 FSD2A1L4K1 749 aa14.91□□□□□ -0.02
PDE6B-212ENST00000496514 ALDH1L1O75891 902 aa14.91□□□□□ -0.02
PDE6B-212ENST00000496514 PXDNLA1KZ92 1463 aa14.91□□□□□ -0.02
PDE6B-212ENST00000496514 LARGE1O95461 756 aa14.9□□□□□ -0.02
PDE6B-212ENST00000496514 CASTP20810 708 aaKnown RBP14.9□□□□□ -0.02
PDE6B-212ENST00000496514 TAF6LQ9Y6J9 622 aa14.9□□□□□ -0.02
PDE6B-212ENST00000496514 LSG1Q9H089 658 aaKnown RBP14.9□□□□□ -0.02
PDE6B-212ENST00000496514 RRAGDQ9NQL2 400 aaPredicted RBP14.9□□□□□ -0.02
PDE6B-212ENST00000496514 GLRX3O76003 335 aaKnown RBP14.9□□□□□ -0.02
PDE6B-212ENST00000496514 SNRPA1P09661 255 aaKnown RBP14.9□□□□□ -0.02
PDE6B-212ENST00000496514 LARP1Q6PKG0 1096 aaKnown RBP14.9□□□□□ -0.02
PDE6B-212ENST00000496514 DNAJC2Q99543 621 aaKnown RBP14.9□□□□□ -0.02
PDE6B-212ENST00000496514 SPATA31A3Q5VYP0 1347 aa14.89□□□□□ -0.03
PDE6B-212ENST00000496514 USP54Q70EL1 1684 aa14.89□□□□□ -0.03
PDE6B-212ENST00000496514 LMO7Q8WWI1 1683 aa14.89□□□□□ -0.03
PDE6B-212ENST00000496514 NUCB2P80303 420 aa14.89□□□□□ -0.03
PDE6B-212ENST00000496514 CACNA1FO60840 1977 aa14.89□□□□□ -0.03
PDE6B-212ENST00000496514 HEG1Q9ULI3 1381 aa14.89□□□□□ -0.03
PDE6B-212ENST00000496514 AK2P54819 239 aa14.89□□□□□ -0.03
PDE6B-212ENST00000496514 FMNL2Q96PY5 1086 aa14.89□□□□□ -0.03
PDE6B-212ENST00000496514 FSD1Q9BTV5 496 aa14.89□□□□□ -0.03
PDE6B-212ENST00000496514 TRPM3Q9HCF6 1732 aaPredicted RBP14.89□□□□□ -0.03
PDE6B-212ENST00000496514 STRCP1A6NGW2 1772 aa14.89□□□□□ -0.03
PDE6B-212ENST00000496514 HSPA4P34932 840 aa14.88□□□□□ -0.03
PDE6B-212ENST00000496514 TFCP2Q12800 502 aa14.88□□□□□ -0.03
PDE6B-212ENST00000496514 NMIQ13287 307 aaPredicted RBP14.88□□□□□ -0.03
PDE6B-212ENST00000496514 HSP90AB4PQ58FF6 505 aa14.88□□□□□ -0.03
PDE6B-212ENST00000496514 DCAF5Q96JK2 942 aa14.88□□□□□ -0.03
PDE6B-212ENST00000496514 JAKMIP1Q96N16 626 aaKnown RBP14.88□□□□□ -0.03
PDE6B-212ENST00000496514 LMBRD1Q9NUN5 540 aa14.88□□□□□ -0.03
PDE6B-212ENST00000496514 NBPF26B4DH59 902 aa14.88□□□□□ -0.03
PDE6B-212ENST00000496514 NBPF14Q5TI25 921 aa14.88□□□□□ -0.03
PDE6B-212ENST00000496514 NBPF10Q6P3W6 841 aaKnown RBP14.88□□□□□ -0.03
PDE6B-212ENST00000496514 NBPF15Q8N660 670 aa14.88□□□□□ -0.03
PDE6B-212ENST00000496514 ZNF594Q96JF6 807 aaPredicted RBP14.88□□□□□ -0.03
PDE6B-212ENST00000496514 METTL22Q9BUU2 404 aaPredicted RBP14.88□□□□□ -0.03
PDE6B-212ENST00000496514 A0A0D9SFI3 127 aa14.88□□□□□ -0.03
PDE6B-212ENST00000496514 CYP2E1P05181 493 aaPredicted RBP14.87□□□□□ -0.03
PDE6B-212ENST00000496514 EVA1CP58658 441 aa14.87□□□□□ -0.03
PDE6B-212ENST00000496514 CCDC129Q6ZRS4 1044 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms